RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.72■□□□□ 0.43
SDF4-204ENST00000459994 DAGLBQ8NCG7 672 aa17.72■□□□□ 0.43
SDF4-204ENST00000459994 C6orf50Q9HD87 102 aa17.72■□□□□ 0.43
SDF4-204ENST00000459994 RIC8AQ9NPQ8 531 aa17.72■□□□□ 0.43
SDF4-204ENST00000459994 PRDM6Q9NQX0 595 aa17.72■□□□□ 0.43
SDF4-204ENST00000459994 MSRAQ9UJ68 235 aa17.72■□□□□ 0.43
SDF4-204ENST00000459994 CIZ1Q9ULV3 898 aaPredicted RBP17.72■□□□□ 0.43
SDF4-204ENST00000459994 KCNJ14Q9UNX9 436 aa17.72■□□□□ 0.43
SDF4-204ENST00000459994 GSTTP1A0A1W2PQM5 241 aa17.71■□□□□ 0.43
SDF4-204ENST00000459994 DLL1O00548 723 aa17.71■□□□□ 0.43
SDF4-204ENST00000459994 CXCL10P02778 98 aa17.71■□□□□ 0.43
SDF4-204ENST00000459994 MMP1P03956 469 aa17.71■□□□□ 0.43
SDF4-204ENST00000459994 ADCY7P51828 1080 aa17.71■□□□□ 0.43
SDF4-204ENST00000459994 SAFBQ15424 915 aaKnown RBP eCLIP17.71■□□□□ 0.43
SDF4-204ENST00000459994 NPY5RQ15761 445 aa17.71■□□□□ 0.43
SDF4-204ENST00000459994 NLRX1Q86UT6 975 aa17.71■□□□□ 0.43
SDF4-204ENST00000459994 SERINC5Q86VE9 423 aa17.71■□□□□ 0.43
SDF4-204ENST00000459994 CCDC155Q8N6L0 562 aa17.71■□□□□ 0.43
SDF4-204ENST00000459994 BICD2Q8TD16 824 aa17.71■□□□□ 0.43
SDF4-204ENST00000459994 GPRASP2Q96D09 838 aa17.71■□□□□ 0.43
SDF4-204ENST00000459994 SENP7Q9BQF6 1050 aa17.71■□□□□ 0.43
SDF4-204ENST00000459994 SETD4Q9NVD3 440 aa17.71■□□□□ 0.43
SDF4-204ENST00000459994 PCDHA4Q9UN74 947 aa17.71■□□□□ 0.43
SDF4-204ENST00000459994 MTMR6Q9Y217 621 aa17.71■□□□□ 0.43
SDF4-204ENST00000459994 PCDHA11Q9Y5I1 949 aa17.71■□□□□ 0.43
SDF4-204ENST00000459994 NLRC5Q86WI3 1866 aa17.71■□□□□ 0.43
SDF4-204ENST00000459994 C17orf102A2RUQ5 167 aa17.7■□□□□ 0.42
SDF4-204ENST00000459994 EPOPA6NHQ4 379 aa17.7■□□□□ 0.42
SDF4-204ENST00000459994 SPDYE3A6NKU9 549 aa17.7■□□□□ 0.42
SDF4-204ENST00000459994 RFXAPO00287 272 aa17.7■□□□□ 0.42
SDF4-204ENST00000459994 CA3P07451 260 aa17.7■□□□□ 0.42
SDF4-204ENST00000459994 ACTN1P12814 892 aa17.7■□□□□ 0.42
SDF4-204ENST00000459994 CLK2P49760 499 aaKnown RBP17.7■□□□□ 0.42
SDF4-204ENST00000459994 FOSBP53539 338 aa17.7■□□□□ 0.42
SDF4-204ENST00000459994 WDR5P61964 334 aaKnown RBP17.7■□□□□ 0.42
SDF4-204ENST00000459994 GUCY1B3Q02153 619 aa17.7■□□□□ 0.42
SDF4-204ENST00000459994 XRRA1Q6P2D8 792 aa17.7■□□□□ 0.42
SDF4-204ENST00000459994 ATP6V0A1Q93050 837 aa17.7■□□□□ 0.42
SDF4-204ENST00000459994 CERS4Q9HA82 394 aa17.7■□□□□ 0.42
SDF4-204ENST00000459994 SLC28A3Q9HAS3 691 aa17.7■□□□□ 0.42
SDF4-204ENST00000459994 BRMS1Q9HCU9 246 aa17.7■□□□□ 0.42
SDF4-204ENST00000459994 JADE2Q9NQC1 790 aa17.7■□□□□ 0.42
SDF4-204ENST00000459994 EVPLQ92817 2033 aa17.7■□□□□ 0.42
SDF4-204ENST00000459994 MYH9P35579 1960 aaKnown RBP17.7■□□□□ 0.42
SDF4-204ENST00000459994 A0A0C4DFX4 3053 aa17.69■□□□□ 0.42
SDF4-204ENST00000459994 ATG2AQ2TAZ0 1938 aa17.69■□□□□ 0.42
SDF4-204ENST00000459994 ARP10275 920 aa17.69■□□□□ 0.42
SDF4-204ENST00000459994 TCF7P36402 384 aaPredicted RBP17.69■□□□□ 0.42
SDF4-204ENST00000459994 ADAM17P78536 824 aa17.69■□□□□ 0.42
SDF4-204ENST00000459994 NUCB2P80303 420 aa17.69■□□□□ 0.42
SDF4-204ENST00000459994 MTMR1Q13613 665 aa17.69■□□□□ 0.42
SDF4-204ENST00000459994 PPP2R2DQ66LE6 453 aa17.69■□□□□ 0.42
SDF4-204ENST00000459994 BLIDQ8IZY5 108 aa17.69■□□□□ 0.42
SDF4-204ENST00000459994 PPM1EQ8WY54 764 aa17.69■□□□□ 0.42
SDF4-204ENST00000459994 ZBTB10Q96DT7 871 aa17.69■□□□□ 0.42
SDF4-204ENST00000459994 PCYT2Q99447 389 aa17.69■□□□□ 0.42
SDF4-204ENST00000459994 ANO3Q9BYT9 981 aa17.69■□□□□ 0.42
SDF4-204ENST00000459994 LCHNA4D1U4 455 aa17.68■□□□□ 0.42
SDF4-204ENST00000459994 VPS37CA5D8V6 355 aaPredicted RBP17.68■□□□□ 0.42
SDF4-204ENST00000459994 M0R2N6 131 aa17.68■□□□□ 0.42
SDF4-204ENST00000459994 BRD1O95696 1058 aa17.68■□□□□ 0.42
SDF4-204ENST00000459994 VCANP13611 3396 aa17.68■□□□□ 0.42
SDF4-204ENST00000459994 MARK3P27448 753 aa17.68■□□□□ 0.42
SDF4-204ENST00000459994 KRT2P35908 639 aa17.68■□□□□ 0.42
SDF4-204ENST00000459994 THPOP40225 353 aa17.68■□□□□ 0.42
SDF4-204ENST00000459994 MCTP2Q6DN12 878 aa17.68■□□□□ 0.42
SDF4-204ENST00000459994 CNKSR3Q6P9H4 555 aa17.68■□□□□ 0.42
SDF4-204ENST00000459994 RUFY4Q6ZNE9 571 aa17.68■□□□□ 0.42
SDF4-204ENST00000459994 HERC6Q8IVU3 1022 aa17.68■□□□□ 0.42
SDF4-204ENST00000459994 DIS3L2Q8IYB7 885 aaKnown RBP17.68■□□□□ 0.42
SDF4-204ENST00000459994 LMBR1Q8WVP7 490 aa17.68■□□□□ 0.42
SDF4-204ENST00000459994 UIMC1Q96RL1 719 aa17.68■□□□□ 0.42
SDF4-204ENST00000459994 SLC9A7Q96T83 725 aa17.68■□□□□ 0.42
SDF4-204ENST00000459994 MXRA8Q9BRK3 442 aa17.68■□□□□ 0.42
SDF4-204ENST00000459994 FOXP1Q9H334 677 aaPredicted RBP17.68■□□□□ 0.42
SDF4-204ENST00000459994 CTSHP09668 335 aa17.67■□□□□ 0.42
SDF4-204ENST00000459994 ZSCAN22P10073 491 aaPredicted RBP17.67■□□□□ 0.42
SDF4-204ENST00000459994 U2AF2P26368 475 aaKnown RBP eCLIP17.67■□□□□ 0.42
SDF4-204ENST00000459994 ITGB3BPQ13352 177 aaPredicted RBP17.67■□□□□ 0.42
SDF4-204ENST00000459994 MKRN4PQ13434 485 aaPredicted RBP17.67■□□□□ 0.42
SDF4-204ENST00000459994 JAKMIP3Q5VZ66 844 aa17.67■□□□□ 0.42
SDF4-204ENST00000459994 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.67■□□□□ 0.42
SDF4-204ENST00000459994 REXO1Q8N1G1 1221 aaKnown RBP17.67■□□□□ 0.42
SDF4-204ENST00000459994 COL25A1Q9BXS0 654 aaPredicted RBP17.67■□□□□ 0.42
SDF4-204ENST00000459994 KCNH7Q9NS40 1196 aa17.67■□□□□ 0.42
SDF4-204ENST00000459994 CHMP5Q9NZZ3 219 aa17.67■□□□□ 0.42
SDF4-204ENST00000459994 TRANK1O15050 2925 aa17.66■□□□□ 0.42
SDF4-204ENST00000459994 PRRC2BQ5JSZ5 2229 aaKnown RBP17.66■□□□□ 0.42
SDF4-204ENST00000459994 BTBD18B2RXH4 712 aa17.66■□□□□ 0.42
SDF4-204ENST00000459994 BAIAP3O94812 1187 aa17.66■□□□□ 0.42
SDF4-204ENST00000459994 FOSP01100 380 aaPredicted RBP17.66■□□□□ 0.42
SDF4-204ENST00000459994 ARHGAP4P98171 946 aa17.66■□□□□ 0.42
SDF4-204ENST00000459994 TAP1Q03518 808 aa17.66■□□□□ 0.42
SDF4-204ENST00000459994 AP3B2Q13367 1082 aa17.66■□□□□ 0.42
SDF4-204ENST00000459994 PKP1Q13835 747 aa17.66■□□□□ 0.42
SDF4-204ENST00000459994 CCDC85BQ15834 202 aaPredicted RBP17.66■□□□□ 0.42
SDF4-204ENST00000459994 DBF4BQ8NFT6 615 aa17.66■□□□□ 0.42
SDF4-204ENST00000459994 PHOSPHO2Q8TCD6 241 aa17.66■□□□□ 0.42
SDF4-204ENST00000459994 OXER1Q8TDS5 423 aa17.66■□□□□ 0.42
SDF4-204ENST00000459994 TNFRSF25Q93038 417 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms