RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 FIBPO43427 364 aa16.57■□□□□ 0.24
UPF3AP2-201ENST00000457924 BMPR1AP36894 532 aa16.57■□□□□ 0.24
UPF3AP2-201ENST00000457924 MRE11P49959 708 aa16.57■□□□□ 0.24
UPF3AP2-201ENST00000457924 MRPS9P82933 396 aaKnown RBP16.57■□□□□ 0.24
UPF3AP2-201ENST00000457924 TRDNQ13061 729 aa16.57■□□□□ 0.24
UPF3AP2-201ENST00000457924 GRM4Q14833 912 aa16.57■□□□□ 0.24
UPF3AP2-201ENST00000457924 UTP14CQ5TAP6 766 aaKnown RBP16.57■□□□□ 0.24
UPF3AP2-201ENST00000457924 CHD1LQ86WJ1 897 aa16.57■□□□□ 0.24
UPF3AP2-201ENST00000457924 LMBR1Q8WVP7 490 aa16.57■□□□□ 0.24
UPF3AP2-201ENST00000457924 INPP4AQ96PE3 977 aaPredicted RBP16.57■□□□□ 0.24
UPF3AP2-201ENST00000457924 POP1Q99575 1024 aaKnown RBP16.57■□□□□ 0.24
UPF3AP2-201ENST00000457924 RTEL1Q9NZ71 1219 aa16.57■□□□□ 0.24
UPF3AP2-201ENST00000457924 FRMPD4Q14CM0 1322 aa16.56■□□□□ 0.24
UPF3AP2-201ENST00000457924 ADGRA3Q8IWK6 1321 aa16.56■□□□□ 0.24
UPF3AP2-201ENST00000457924 LTBRP36941 435 aa16.56■□□□□ 0.24
UPF3AP2-201ENST00000457924 ADAM17P78536 824 aa16.56■□□□□ 0.24
UPF3AP2-201ENST00000457924 NHLH1Q02575 133 aa16.56■□□□□ 0.24
UPF3AP2-201ENST00000457924 CYB5R4Q7L1T6 521 aa16.56■□□□□ 0.24
UPF3AP2-201ENST00000457924 TRIM50Q86XT4 487 aa16.56■□□□□ 0.24
UPF3AP2-201ENST00000457924 SMC5Q8IY18 1101 aa16.56■□□□□ 0.24
UPF3AP2-201ENST00000457924 FBXL18Q96ME1 805 aa16.56■□□□□ 0.24
UPF3AP2-201ENST00000457924 RWDD1Q9H446 243 aaPredicted RBP16.56■□□□□ 0.24
UPF3AP2-201ENST00000457924 ERICH2A1L162 156 aa16.55■□□□□ 0.24
UPF3AP2-201ENST00000457924 GRM6O15303 877 aa16.55■□□□□ 0.24
UPF3AP2-201ENST00000457924 CHRNA1P02708 482 aa16.55■□□□□ 0.24
UPF3AP2-201ENST00000457924 GHRP10912 638 aa16.55■□□□□ 0.24
UPF3AP2-201ENST00000457924 IRS1P35568 1242 aa16.55■□□□□ 0.24
UPF3AP2-201ENST00000457924 SP4Q02446 784 aa16.55■□□□□ 0.24
UPF3AP2-201ENST00000457924 SEMA3FQ13275 785 aa16.55■□□□□ 0.24
UPF3AP2-201ENST00000457924 SMAD2Q15796 467 aaKnown RBP16.55■□□□□ 0.24
UPF3AP2-201ENST00000457924 CLUL1Q15846 466 aa16.55■□□□□ 0.24
UPF3AP2-201ENST00000457924 SLC35G1Q2M3R5 365 aa16.55■□□□□ 0.24
UPF3AP2-201ENST00000457924 CTC1Q2NKJ3 1217 aa16.55■□□□□ 0.24
UPF3AP2-201ENST00000457924 TAF2Q6P1X5 1199 aa16.55■□□□□ 0.24
UPF3AP2-201ENST00000457924 RSPH3Q86UC2 560 aa16.55■□□□□ 0.24
UPF3AP2-201ENST00000457924 IFIT3O14879 490 aaKnown RBP16.54■□□□□ 0.24
UPF3AP2-201ENST00000457924 MBTPS2O43462 519 aa16.54■□□□□ 0.24
UPF3AP2-201ENST00000457924 CYTH3O43739 400 aa16.54■□□□□ 0.24
UPF3AP2-201ENST00000457924 HYAL1Q12794 435 aa16.54■□□□□ 0.24
UPF3AP2-201ENST00000457924 BTG3Q14201 252 aaPredicted RBP16.54■□□□□ 0.24
UPF3AP2-201ENST00000457924 NLRX1Q86UT6 975 aa16.54■□□□□ 0.24
UPF3AP2-201ENST00000457924 GIMAP8Q8ND71 665 aaPredicted RBP16.54■□□□□ 0.24
UPF3AP2-201ENST00000457924 SMARCC2Q8TAQ2 1214 aa16.54■□□□□ 0.24
UPF3AP2-201ENST00000457924 CUL5Q93034 780 aa16.54■□□□□ 0.24
UPF3AP2-201ENST00000457924 MFSD14AQ96MC6 490 aa16.54■□□□□ 0.24
UPF3AP2-201ENST00000457924 SENP7Q9BQF6 1050 aa16.54■□□□□ 0.24
UPF3AP2-201ENST00000457924 IGFLR1Q9H665 355 aa16.54■□□□□ 0.24
UPF3AP2-201ENST00000457924 EHMT1Q9H9B1 1298 aa16.54■□□□□ 0.24
UPF3AP2-201ENST00000457924 ENPP3O14638 875 aa16.53■□□□□ 0.24
UPF3AP2-201ENST00000457924 LINC00271P0C7V0 271 aa16.53■□□□□ 0.24
UPF3AP2-201ENST00000457924 EMP3P54852 163 aa16.53■□□□□ 0.24
UPF3AP2-201ENST00000457924 NUCB1Q02818 461 aa16.53■□□□□ 0.24
UPF3AP2-201ENST00000457924 DLX2Q07687 328 aaPredicted RBP16.53■□□□□ 0.24
UPF3AP2-201ENST00000457924 SMAD4Q13485 552 aaKnown RBP16.53■□□□□ 0.24
UPF3AP2-201ENST00000457924 AAMPQ13685 434 aa16.53■□□□□ 0.24
UPF3AP2-201ENST00000457924 PCNX4Q63HM2 1172 aa16.53■□□□□ 0.24
UPF3AP2-201ENST00000457924 XRRA1Q6P2D8 792 aa16.53■□□□□ 0.24
UPF3AP2-201ENST00000457924 HFE2Q6ZVN8 426 aa16.53■□□□□ 0.24
UPF3AP2-201ENST00000457924 CLP1Q92989 425 aaKnown RBP16.53■□□□□ 0.24
UPF3AP2-201ENST00000457924 PLVAPQ9BX97 442 aa16.53■□□□□ 0.24
UPF3AP2-201ENST00000457924 LHX6Q9UPM6 363 aa16.53■□□□□ 0.24
UPF3AP2-201ENST00000457924 SUPT16HQ9Y5B9 1047 aaKnown RBP16.53■□□□□ 0.24
UPF3AP2-201ENST00000457924 TTC3P53804 2025 aa16.52■□□□□ 0.24
UPF3AP2-201ENST00000457924 CSPG5O95196 566 aa16.52■□□□□ 0.24
UPF3AP2-201ENST00000457924 MMP1P03956 469 aa16.52■□□□□ 0.24
UPF3AP2-201ENST00000457924 TCF7P36402 384 aaPredicted RBP16.52■□□□□ 0.24
UPF3AP2-201ENST00000457924 MGAT3Q09327 533 aa16.52■□□□□ 0.24
UPF3AP2-201ENST00000457924 PPFIA1Q13136 1202 aa16.52■□□□□ 0.24
UPF3AP2-201ENST00000457924 LPIN1Q14693 890 aa16.52■□□□□ 0.24
UPF3AP2-201ENST00000457924 WTAPQ15007 396 aa16.52■□□□□ 0.24
UPF3AP2-201ENST00000457924 SART3Q15020 963 aaKnown RBP16.52■□□□□ 0.24
UPF3AP2-201ENST00000457924 HERC4Q5GLZ8 1057 aaPredicted RBP16.52■□□□□ 0.24
UPF3AP2-201ENST00000457924 RUFY4Q6ZNE9 571 aa16.52■□□□□ 0.24
UPF3AP2-201ENST00000457924 PIBF1Q8WXW3 757 aa16.52■□□□□ 0.24
UPF3AP2-201ENST00000457924 PPP2R3CQ969Q6 453 aa16.52■□□□□ 0.24
UPF3AP2-201ENST00000457924 ZNF689Q96CS4 500 aaPredicted RBP16.52■□□□□ 0.24
UPF3AP2-201ENST00000457924 RC3H2Q9HBD1 1191 aaKnown RBP16.52■□□□□ 0.24
UPF3AP2-201ENST00000457924 MUTYHQ9UIF7 546 aa16.52■□□□□ 0.24
UPF3AP2-201ENST00000457924 CD207Q9UJ71 328 aa16.52■□□□□ 0.24
UPF3AP2-201ENST00000457924 TELO2Q9Y4R8 837 aa16.52■□□□□ 0.24
UPF3AP2-201ENST00000457924 STXBP3O00186 592 aa16.51■□□□□ 0.23
UPF3AP2-201ENST00000457924 TROAPQ12815 778 aa16.51■□□□□ 0.23
UPF3AP2-201ENST00000457924 RALYLQ86SE5 291 aaKnown RBP16.51■□□□□ 0.23
UPF3AP2-201ENST00000457924 RNF135Q8IUD6 432 aa16.51■□□□□ 0.23
UPF3AP2-201ENST00000457924 ALG13Q9NP73 1137 aaKnown RBP16.51■□□□□ 0.23
UPF3AP2-201ENST00000457924 ERAP1Q9NZ08 941 aa16.51■□□□□ 0.23
UPF3AP2-201ENST00000457924 TUBE1Q9UJT0 475 aa16.51■□□□□ 0.23
UPF3AP2-201ENST00000457924 ZNF318Q5VUA4 2279 aa16.5■□□□□ 0.23
UPF3AP2-201ENST00000457924 TBX10O75333 385 aa16.5■□□□□ 0.23
UPF3AP2-201ENST00000457924 DGKIO75912 1065 aa16.5■□□□□ 0.23
UPF3AP2-201ENST00000457924 GTF2F1P35269 517 aaKnown RBP eCLIP16.5■□□□□ 0.23
UPF3AP2-201ENST00000457924 NDUFV1P49821 464 aa16.5■□□□□ 0.23
UPF3AP2-201ENST00000457924 ADAM15Q13444 863 aa16.5■□□□□ 0.23
UPF3AP2-201ENST00000457924 GRIK4Q16099 956 aa16.5■□□□□ 0.23
UPF3AP2-201ENST00000457924 FBXO47Q5MNV8 452 aa16.5■□□□□ 0.23
UPF3AP2-201ENST00000457924 USP17L6PQ6QN14 398 aa16.5■□□□□ 0.23
UPF3AP2-201ENST00000457924 TSHZ1Q6ZSZ6 1077 aa16.5■□□□□ 0.23
UPF3AP2-201ENST00000457924 CATIPQ7Z7H3 387 aa16.5■□□□□ 0.23
UPF3AP2-201ENST00000457924 DNAJB3Q8WWF6 145 aa16.5■□□□□ 0.23
UPF3AP2-201ENST00000457924 P2RX5Q93086 422 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms