RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 RNF207Q6ZRF8 634 aa17.82■□□□□ 0.44
LSS-205ENST00000457828 UHMK1Q8TAS1 419 aaKnown RBP17.82■□□□□ 0.44
LSS-205ENST00000457828 OSBPL9Q96SU4 736 aa17.82■□□□□ 0.44
LSS-205ENST00000457828 UTP11Q9Y3A2 253 aaKnown RBP17.82■□□□□ 0.44
LSS-205ENST00000457828 SARSP49591 514 aaKnown RBP17.82■□□□□ 0.44
LSS-205ENST00000457828 ZDHHC15Q96MV8 337 aa17.82■□□□□ 0.44
LSS-205ENST00000457828 VWA3BQ502W6 1294 aa17.82■□□□□ 0.44
LSS-205ENST00000457828 XKR9Q5GH70 373 aa17.82■□□□□ 0.44
LSS-205ENST00000457828 MAP1SQ66K74 1059 aaPredicted RBP17.82■□□□□ 0.44
LSS-205ENST00000457828 ADSSL1Q8N142 457 aa17.82■□□□□ 0.44
LSS-205ENST00000457828 FEM1BQ9UK73 627 aa17.82■□□□□ 0.44
LSS-205ENST00000457828 USP17L15C9J2P7 530 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 USP17L13C9JLJ4 530 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 USP17L11C9JVI0 530 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 USP17L18D6R9N7 530 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 USP17L22D6RA61 530 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 USP17L17D6RBQ6 530 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 USP17L19D6RCP7 530 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 USP17L20D6RJB6 530 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 USP17L24Q0WX57 530 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 EMBQ6PCB8 327 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 USP17L6PQ6QN14 398 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 TMEM139Q8IV31 216 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 SLFN12Q8IYM2 578 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 NT5C3AQ9H0P0 336 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 RPAP3Q9H6T3 665 aaPredicted RBP17.81■□□□□ 0.44
LSS-205ENST00000457828 ABL1P00519 1130 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 ANKRD40Q6AI12 368 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 FAM133AQ8N9E0 248 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 PAIP2Q9BPZ3 127 aaKnown RBP17.81■□□□□ 0.44
LSS-205ENST00000457828 ZNF577Q9BSK1 485 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 IMPG2Q9BZV3 1241 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 NBPF3Q9H094 633 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 RNF146Q9NTX7 359 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 PACSIN2Q9UNF0 486 aaPredicted RBP17.81■□□□□ 0.44
LSS-205ENST00000457828 PCDHB13Q9Y5F0 798 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 NR1D1P20393 614 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 IGBP1P78318 339 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 MDM2Q00987 491 aaPredicted RBP17.81■□□□□ 0.44
LSS-205ENST00000457828 CDKAL1Q5VV42 579 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 LRRC31Q6UY01 552 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 CCNI2Q6ZMN8 369 aaPredicted RBP17.81■□□□□ 0.44
LSS-205ENST00000457828 LACRTQ9GZZ8 138 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 CUEDC2Q9H467 287 aa17.81■□□□□ 0.44
LSS-205ENST00000457828 RASA1P20936 1047 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 RCAN1P53805 252 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 TTBK2Q6IQ55 1244 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 OTUD6AQ7L8S5 288 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 STAG2Q8N3U4 1231 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 UPF1Q92900 1129 aaKnown RBP eCLIP17.8■□□□□ 0.443e-17■■■■■ 38.2
LSS-205ENST00000457828 NUCKS1Q9H1E3 243 aaKnown RBP17.8■□□□□ 0.44
LSS-205ENST00000457828 HSD3B7Q9H2F3 369 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 PANK4Q9NVE7 773 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 SAMD15Q9P1V8 674 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 RASAL2Q9UJF2 1139 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 A0A1W2PQC6 194 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 QRICH1Q2TAL8 776 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 GPBP1Q86WP2 473 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 ELOA2Q8IYF1 753 aaPredicted RBP17.8■□□□□ 0.44
LSS-205ENST00000457828 ZNF280CQ8ND82 737 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 U2AF1L4Q8WU68 220 aaKnown RBP17.8■□□□□ 0.44
LSS-205ENST00000457828 EHD2Q9NZN4 543 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 STK24Q9Y6E0 443 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 hCG_1984214I3L0E3 225 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 KIF4AO95239 1232 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 NDUFB10O96000 172 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 MMS22LQ6ZRQ5 1243 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 ZNF713Q8N859 430 aaPredicted RBP17.8■□□□□ 0.44
LSS-205ENST00000457828 SYT17Q9BSW7 474 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 BAIAP2L1Q9UHR4 511 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 ATRNO75882 1429 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 LTN1O94822 1766 aa17.8■□□□□ 0.44
LSS-205ENST00000457828 DESP17661 470 aa17.79■□□□□ 0.44
LSS-205ENST00000457828 ADAM9Q13443 819 aa17.79■□□□□ 0.44
LSS-205ENST00000457828 FASTKD5Q7L8L6 764 aaKnown RBP17.79■□□□□ 0.44
LSS-205ENST00000457828 ZKSCAN4Q969J2 545 aaPredicted RBP17.79■□□□□ 0.44
LSS-205ENST00000457828 AK8Q96MA6 479 aa17.79■□□□□ 0.44
LSS-205ENST00000457828 JPH2Q9BR39 696 aaPredicted RBP17.79■□□□□ 0.44
LSS-205ENST00000457828 MYL1P05976 194 aa17.79■□□□□ 0.44
LSS-205ENST00000457828 RPL13P26373 211 aaKnown RBP17.79■□□□□ 0.44
LSS-205ENST00000457828 STRN3Q13033 797 aa17.79■□□□□ 0.44
LSS-205ENST00000457828 RMDN3Q96TC7 470 aa17.79■□□□□ 0.44
LSS-205ENST00000457828 MYCBPQ99417 103 aaPredicted RBP17.79■□□□□ 0.44
LSS-205ENST00000457828 PSMD1Q99460 953 aa17.79■□□□□ 0.44
LSS-205ENST00000457828 SNX12Q9UMY4 172 aa17.79■□□□□ 0.44
LSS-205ENST00000457828 STAT3P40763 770 aa17.79■□□□□ 0.44
LSS-205ENST00000457828 NAA25Q14CX7 972 aa17.79■□□□□ 0.44
LSS-205ENST00000457828 LRP10Q7Z4F1 713 aa17.79■□□□□ 0.44
LSS-205ENST00000457828 MTA3Q9BTC8 594 aa17.79■□□□□ 0.44
LSS-205ENST00000457828 TRIM6Q9C030 488 aaPredicted RBP17.79■□□□□ 0.44
LSS-205ENST00000457828 KCNK9Q9NPC2 374 aa17.79■□□□□ 0.44
LSS-205ENST00000457828 EPB41P11171 864 aaKnown RBP17.79■□□□□ 0.44
LSS-205ENST00000457828 STK4Q13043 487 aa17.79■□□□□ 0.44
LSS-205ENST00000457828 ALS2CLQ60I27 953 aa17.79■□□□□ 0.44
LSS-205ENST00000457828 C16orf86Q6ZW13 317 aa17.79■□□□□ 0.44
LSS-205ENST00000457828 MS4A14Q96JA4 679 aa17.79■□□□□ 0.44
LSS-205ENST00000457828 AP1M1Q9BXS5 423 aa17.79■□□□□ 0.44
LSS-205ENST00000457828 AKAP12Q02952 1782 aa17.78■□□□□ 0.44
LSS-205ENST00000457828 LAD1O00515 517 aa17.78■□□□□ 0.44
LSS-205ENST00000457828 PALMO75781 387 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms