RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 PACSIN2Q9UNF0 486 aaPredicted RBP13.47□□□□□ -0.25
SEMA4D-213ENST00000455551 SSU72P8A0A1W2PR75 194 aa13.46□□□□□ -0.25
SEMA4D-213ENST00000455551 A0A1W2PRG0 241 aa13.46□□□□□ -0.25
SEMA4D-213ENST00000455551 BMP3P12645 472 aa13.46□□□□□ -0.25
SEMA4D-213ENST00000455551 MCM3P25205 808 aa13.46□□□□□ -0.25
SEMA4D-213ENST00000455551 KLHL30Q0D2K2 578 aa13.46□□□□□ -0.25
SEMA4D-213ENST00000455551 TCERG1LQ5VWI1 586 aa13.46□□□□□ -0.25
SEMA4D-213ENST00000455551 MBOAT7Q96N66 472 aa13.46□□□□□ -0.25
SEMA4D-213ENST00000455551 TLR10Q9BXR5 811 aa13.46□□□□□ -0.25
SEMA4D-213ENST00000455551 IKZF4Q9H2S9 585 aa13.46□□□□□ -0.25
SEMA4D-213ENST00000455551 HDAC9Q9UKV0 1011 aa13.46□□□□□ -0.25
SEMA4D-213ENST00000455551 A0A087X0T9 212 aa13.46□□□□□ -0.25
SEMA4D-213ENST00000455551 GNA14O95837 355 aa13.46□□□□□ -0.25
SEMA4D-213ENST00000455551 FAM228BP0C875 321 aa13.46□□□□□ -0.25
SEMA4D-213ENST00000455551 SLC9A1P19634 815 aa13.46□□□□□ -0.25
SEMA4D-213ENST00000455551 ECE1P42892 770 aa13.46□□□□□ -0.25
SEMA4D-213ENST00000455551 KLHDC7AQ5VTJ3 777 aa13.46□□□□□ -0.25
SEMA4D-213ENST00000455551 CCDC70Q6NSX1 233 aa13.46□□□□□ -0.25
SEMA4D-213ENST00000455551 CRYGNQ8WXF5 182 aa13.46□□□□□ -0.25
SEMA4D-213ENST00000455551 CSRNP1Q96S65 589 aa13.46□□□□□ -0.25
SEMA4D-213ENST00000455551 RUSC1Q9BVN2 902 aa13.46□□□□□ -0.25
SEMA4D-213ENST00000455551 OPLAHO14841 1288 aa13.46□□□□□ -0.26
SEMA4D-213ENST00000455551 KLRC1P26715 233 aa13.46□□□□□ -0.26
SEMA4D-213ENST00000455551 RNASE9P60153 205 aaKnown RBP13.46□□□□□ -0.26
SEMA4D-213ENST00000455551 KCNA1Q09470 495 aa13.46□□□□□ -0.26
SEMA4D-213ENST00000455551 PTPROQ16827 1216 aa13.46□□□□□ -0.26
SEMA4D-213ENST00000455551 RBM26Q5T8P6 1007 aaKnown RBP13.46□□□□□ -0.26
SEMA4D-213ENST00000455551 CCNI2Q6ZMN8 369 aaPredicted RBP13.46□□□□□ -0.26
SEMA4D-213ENST00000455551 FAM71BQ8TC56 605 aa13.46□□□□□ -0.26
SEMA4D-213ENST00000455551 PIGOQ8TEQ8 1089 aa13.46□□□□□ -0.26
SEMA4D-213ENST00000455551 EDEM3Q9BZQ6 932 aa13.46□□□□□ -0.26
SEMA4D-213ENST00000455551 CALCOCO1Q9P1Z2 691 aa13.46□□□□□ -0.26
SEMA4D-213ENST00000455551 FRMD3A2A2Y4 597 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 EML1O00423 815 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 CLIC2O15247 247 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 PJA2O43164 708 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 RNF40O75150 1001 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 PALMO75781 387 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 APBA3O96018 575 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 CAPN2P17655 700 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 TCP1P17987 556 aaKnown RBP13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 RPA1P27694 616 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 HOXD13P35453 343 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 CTTNQ14247 550 aaKnown RBP13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 PRMT6Q96LA8 375 aaPredicted RBP13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 FAM204AQ9H8W3 233 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 BRWD3Q6RI45 1802 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 FAM170AA1A519 330 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 GCNT3O95395 438 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 CFBP00751 764 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 SREBF1P36956 1147 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 ASIC2Q16515 512 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 FOXR2Q6PJQ5 311 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 ARMCX3Q9UH62 379 aaPredicted RBP13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 PITPNM2Q9BZ72 1349 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 TCP10L2B9ZVM9 353 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 ZSCAN26Q16670 478 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 KNOP1Q1ED39 458 aaKnown RBP13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 KIAA0753Q2KHM9 967 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 CCDC174Q6PII3 467 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 SND1Q7KZF4 910 aaKnown RBP eCLIP13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 SYT2Q8N9I0 419 aaPredicted RBP13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 GANQ9H2C0 597 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 RBM12Q9NTZ6 932 aaKnown RBP13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 PRR12Q9ULL5 1215 aa13.45□□□□□ -0.26
SEMA4D-213ENST00000455551 CLRN2A0PK11 232 aa13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 ZBTB39O15060 712 aa13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 SYF2O95926 243 aaKnown RBP13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 PAFAH1B1P43034 410 aa13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 CASP4P49662 377 aa13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 ZYXQ15942 572 aaKnown RBP13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 Q4G0T1 1027 aa13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 MOXD1Q6UVY6 613 aa13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 GMCL1P1Q8NEA9 526 aa13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 AKT1S1Q96B36 256 aa13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 SPAG5Q96R06 1193 aa13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 EIF2AK1Q9BQI3 630 aaKnown RBP13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 TBCAO75347 108 aaKnown RBP13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 AKAP3O75969 853 aa13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 POLD1P28340 1107 aa13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 HOXA7P31268 230 aaPredicted RBP13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 GGCXP38435 758 aa13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 MARSP56192 900 aaKnown RBP13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 EDRF1Q3B7T1 1238 aa13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 MMGT1Q8N4V1 131 aa13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 ACER1Q8TDN7 264 aa13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 GMCL1Q96IK5 515 aa13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 VAV3Q9UKW4 847 aa13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 FAM184BQ9ULE4 1060 aa13.44□□□□□ -0.26
SEMA4D-213ENST00000455551 H0YIN7 160 aa13.43□□□□□ -0.26
SEMA4D-213ENST00000455551 SLC18A3Q16572 532 aa13.43□□□□□ -0.26
SEMA4D-213ENST00000455551 KIAA1755Q5JYT7 1200 aa13.43□□□□□ -0.26
SEMA4D-213ENST00000455551 MSL3Q8N5Y2 521 aaKnown RBP13.43□□□□□ -0.26
SEMA4D-213ENST00000455551 NUCKS1Q9H1E3 243 aaKnown RBP13.43□□□□□ -0.26
SEMA4D-213ENST00000455551 GOLPH3Q9H4A6 298 aa13.43□□□□□ -0.26
SEMA4D-213ENST00000455551 MED4Q9NPJ6 270 aa13.43□□□□□ -0.26
SEMA4D-213ENST00000455551 RABGAP1Q9Y3P9 1069 aa13.43□□□□□ -0.26
SEMA4D-213ENST00000455551 PCDHB13Q9Y5F0 798 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms