RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 POTEDQ86YR6 584 aa16.03■□□□□ 0.16
HDAC4-205ENST00000454542 RDM1Q8NG50 284 aa16.03■□□□□ 0.16
HDAC4-205ENST00000454542 TEKT3Q9BXF9 490 aa16.03■□□□□ 0.16
HDAC4-205ENST00000454542 UNC45AQ9H3U1 944 aa16.03■□□□□ 0.16
HDAC4-205ENST00000454542 VAV3Q9UKW4 847 aa16.03■□□□□ 0.16
HDAC4-205ENST00000454542 KIF3AQ9Y496 699 aa16.03■□□□□ 0.16
HDAC4-205ENST00000454542 MYH9P35579 1960 aaKnown RBP16.02■□□□□ 0.16
HDAC4-205ENST00000454542 WDR64B1ANS9 1081 aa16.02■□□□□ 0.16
HDAC4-205ENST00000454542 KIF28PB7ZC32 967 aa16.02■□□□□ 0.16
HDAC4-205ENST00000454542 CCNT1O60563 726 aaKnown RBP16.02■□□□□ 0.16
HDAC4-205ENST00000454542 GAS7O60861 476 aa16.02■□□□□ 0.16
HDAC4-205ENST00000454542 GJB2P29033 226 aa16.02■□□□□ 0.16
HDAC4-205ENST00000454542 SFNP31947 248 aa16.02■□□□□ 0.16
HDAC4-205ENST00000454542 STAT5BP51692 787 aa16.02■□□□□ 0.16
HDAC4-205ENST00000454542 JAK3P52333 1124 aa16.02■□□□□ 0.16
HDAC4-205ENST00000454542 CHMP4BP1P59074 171 aa16.02■□□□□ 0.16
HDAC4-205ENST00000454542 PPFIA1Q13136 1202 aa16.02■□□□□ 0.16
HDAC4-205ENST00000454542 BFSP2Q13515 415 aa16.02■□□□□ 0.16
HDAC4-205ENST00000454542 PLCB4Q15147 1175 aa16.02■□□□□ 0.16
HDAC4-205ENST00000454542 SAFBQ15424 915 aaKnown RBP eCLIP16.02■□□□□ 0.16
HDAC4-205ENST00000454542 MIS18BP1Q6P0N0 1132 aa16.02■□□□□ 0.16
HDAC4-205ENST00000454542 TMEM199Q8N511 208 aa16.02■□□□□ 0.16
HDAC4-205ENST00000454542 CCDC155Q8N6L0 562 aa16.02■□□□□ 0.16
HDAC4-205ENST00000454542 HAS1Q92839 578 aa16.02■□□□□ 0.16
HDAC4-205ENST00000454542 GLG1Q92896 1179 aa16.02■□□□□ 0.16
HDAC4-205ENST00000454542 GJA10Q969M2 543 aa16.02■□□□□ 0.16
HDAC4-205ENST00000454542 FAM20AQ96MK3 541 aa16.02■□□□□ 0.16
HDAC4-205ENST00000454542 UIMC1Q96RL1 719 aa16.02■□□□□ 0.16
HDAC4-205ENST00000454542 AZI2Q9H6S1 392 aa16.02■□□□□ 0.16
HDAC4-205ENST00000454542 NOD1Q9Y239 953 aa16.02■□□□□ 0.16
HDAC4-205ENST00000454542 PCDHA10Q9Y5I2 948 aa16.02■□□□□ 0.16
HDAC4-205ENST00000454542 MAFBQ9Y5Q3 323 aaPredicted RBP16.02■□□□□ 0.16
HDAC4-205ENST00000454542 TREHO43280 583 aa16.01■□□□□ 0.15
HDAC4-205ENST00000454542 CAND2O75155 1236 aa16.01■□□□□ 0.15
HDAC4-205ENST00000454542 CSF2RAP15509 400 aa16.01■□□□□ 0.15
HDAC4-205ENST00000454542 ATP4AP20648 1035 aa16.01■□□□□ 0.15
HDAC4-205ENST00000454542 U2AF2P26368 475 aaKnown RBP eCLIP16.01■□□□□ 0.15
HDAC4-205ENST00000454542 MARK3P27448 753 aa16.01■□□□□ 0.15
HDAC4-205ENST00000454542 RFC2P35250 354 aa16.01■□□□□ 0.15
HDAC4-205ENST00000454542 SPIRE1Q08AE8 756 aa16.01■□□□□ 0.15
HDAC4-205ENST00000454542 PPP2R5CQ13362 524 aa16.01■□□□□ 0.15
HDAC4-205ENST00000454542 ORC2Q13416 577 aaPredicted RBP16.01■□□□□ 0.15
HDAC4-205ENST00000454542 GRIK4Q16099 956 aa16.01■□□□□ 0.15
HDAC4-205ENST00000454542 C9orf50Q5SZB4 431 aa16.01■□□□□ 0.15
HDAC4-205ENST00000454542 MARCH8Q5T0T0 291 aa16.01■□□□□ 0.15
HDAC4-205ENST00000454542 RASIP1Q5U651 963 aa16.01■□□□□ 0.15
HDAC4-205ENST00000454542 FAM160B1Q5W0V3 765 aa16.01■□□□□ 0.15
HDAC4-205ENST00000454542 C16orf59Q7L2K0 433 aa16.01■□□□□ 0.15
HDAC4-205ENST00000454542 RPAINQ86UA6 219 aa16.01■□□□□ 0.15
HDAC4-205ENST00000454542 ATP8B4Q8TF62 1192 aa16.01■□□□□ 0.15
HDAC4-205ENST00000454542 SNX21Q969T3 373 aa16.01■□□□□ 0.15
HDAC4-205ENST00000454542 IL23AQ9NPF7 189 aa16.01■□□□□ 0.15
HDAC4-205ENST00000454542 ZNF302Q9NR11 478 aa16.01■□□□□ 0.15
HDAC4-205ENST00000454542 SETD4Q9NVD3 440 aa16.01■□□□□ 0.15
HDAC4-205ENST00000454542 TCEAL9Q9UHQ7 104 aa16.01■□□□□ 0.15
HDAC4-205ENST00000454542 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.01■□□□□ 0.15
HDAC4-205ENST00000454542 KAT6AQ92794 2004 aa16.01■□□□□ 0.15
HDAC4-205ENST00000454542 COL1A2P08123 1366 aa16■□□□□ 0.15
HDAC4-205ENST00000454542 PSAPP07602 524 aa16■□□□□ 0.15
HDAC4-205ENST00000454542 PFKMP08237 780 aa16■□□□□ 0.15
HDAC4-205ENST00000454542 IQCF3P0C7M6 154 aa16■□□□□ 0.15
HDAC4-205ENST00000454542 GNAT1P11488 350 aa16■□□□□ 0.15
HDAC4-205ENST00000454542 CKBP12277 381 aa16■□□□□ 0.15
HDAC4-205ENST00000454542 CCL23P55773 120 aa16■□□□□ 0.15
HDAC4-205ENST00000454542 LRIT3Q3SXY7 679 aa16■□□□□ 0.15
HDAC4-205ENST00000454542 PSRC1Q6PGN9 363 aaPredicted RBP16■□□□□ 0.15
HDAC4-205ENST00000454542 NOSTRINQ8IVI9 506 aa16■□□□□ 0.15
HDAC4-205ENST00000454542 ATP6V0A1Q93050 837 aa16■□□□□ 0.15
HDAC4-205ENST00000454542 SCLYQ96I15 445 aa16■□□□□ 0.15
HDAC4-205ENST00000454542 DISC1Q9NRI5 854 aa16■□□□□ 0.15
HDAC4-205ENST00000454542 ZBTB42B2RXF5 422 aa15.99■□□□□ 0.15
HDAC4-205ENST00000454542 K7ELQ4 463 aaPredicted RBP15.99■□□□□ 0.15
HDAC4-205ENST00000454542 BACH1O14867 736 aa15.99■□□□□ 0.15
HDAC4-205ENST00000454542 ZNF862O60290 1169 aa15.99■□□□□ 0.15
HDAC4-205ENST00000454542 INSRRP14616 1297 aa15.99■□□□□ 0.15
HDAC4-205ENST00000454542 SELPP16109 830 aa15.99■□□□□ 0.15
HDAC4-205ENST00000454542 TRAPPC10P48553 1259 aa15.99■□□□□ 0.15
HDAC4-205ENST00000454542 GPNMBQ14956 572 aa15.99■□□□□ 0.15
HDAC4-205ENST00000454542 SHHQ15465 462 aa15.99■□□□□ 0.15
HDAC4-205ENST00000454542 TMEM240Q5SV17 173 aa15.99■□□□□ 0.15
HDAC4-205ENST00000454542 PDXDC2PQ6P474 469 aa15.99■□□□□ 0.15
HDAC4-205ENST00000454542 LRRC8DQ7L1W4 858 aa15.99■□□□□ 0.15
HDAC4-205ENST00000454542 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.99■□□□□ 0.151e-7■■□□□ 11.5
HDAC4-205ENST00000454542 TUBE1Q9UJT0 475 aa15.99■□□□□ 0.15
HDAC4-205ENST00000454542 SMC3Q9UQE7 1217 aa15.99■□□□□ 0.15
HDAC4-205ENST00000454542 TET1Q8NFU7 2136 aa15.98■□□□□ 0.15
HDAC4-205ENST00000454542 POTEB3A0JP26 581 aa15.98■□□□□ 0.15
HDAC4-205ENST00000454542 RRN3P2A6NIE6 340 aa15.98■□□□□ 0.15
HDAC4-205ENST00000454542 CHMP2AO43633 222 aa15.98■□□□□ 0.15
HDAC4-205ENST00000454542 HBP1O60381 514 aa15.98■□□□□ 0.15
HDAC4-205ENST00000454542 NEMFO60524 1076 aa15.98■□□□□ 0.15
HDAC4-205ENST00000454542 PARNO95453 639 aaKnown RBP15.98■□□□□ 0.15
HDAC4-205ENST00000454542 CXCL10P02778 98 aa15.98■□□□□ 0.15
HDAC4-205ENST00000454542 FXR1P51114 621 aaKnown RBP eCLIP15.98■□□□□ 0.15
HDAC4-205ENST00000454542 MBTPS1Q14703 1052 aa15.98■□□□□ 0.15
HDAC4-205ENST00000454542 UGCGQ16739 394 aa15.98■□□□□ 0.15
HDAC4-205ENST00000454542 SWSAP1Q6NVH7 229 aa15.98■□□□□ 0.15
HDAC4-205ENST00000454542 TAF2Q6P1X5 1199 aa15.98■□□□□ 0.15
HDAC4-205ENST00000454542 POTEBQ6S5H4 581 aa15.98■□□□□ 0.15
HDAC4-205ENST00000454542 SLFN12Q8IYM2 578 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms