RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ASTN1O14525 1302 aa17.64■□□□□ 0.42
SNX17-204ENST00000453453 MGAMO43451 1857 aa17.64■□□□□ 0.42
SNX17-204ENST00000453453 EFCAB8A8MWE9 144 aa17.64■□□□□ 0.41
SNX17-204ENST00000453453 PNMA6AP0CW24 399 aaPredicted RBP17.64■□□□□ 0.41
SNX17-204ENST00000453453 CCT6AP40227 531 aaKnown RBP17.64■□□□□ 0.41
SNX17-204ENST00000453453 ZNF792Q3KQV3 632 aa17.64■□□□□ 0.41
SNX17-204ENST00000453453 TMCO3Q6UWJ1 677 aa17.64■□□□□ 0.41
SNX17-204ENST00000453453 TMC6Q7Z403 805 aa17.64■□□□□ 0.41
SNX17-204ENST00000453453 ZNF467Q7Z7K2 595 aaPredicted RBP17.64■□□□□ 0.41
SNX17-204ENST00000453453 ELOA2Q8IYF1 753 aaPredicted RBP17.64■□□□□ 0.41
SNX17-204ENST00000453453 XPO4Q9C0E2 1151 aaKnown RBP17.64■□□□□ 0.41
SNX17-204ENST00000453453 DIS3Q9Y2L1 958 aaKnown RBP17.64■□□□□ 0.41
SNX17-204ENST00000453453 TULP2O00295 520 aa17.63■□□□□ 0.41
SNX17-204ENST00000453453 ZSCAN12O43309 604 aa17.63■□□□□ 0.41
SNX17-204ENST00000453453 CLCN6P51797 869 aa17.63■□□□□ 0.41
SNX17-204ENST00000453453 SPIRE1Q08AE8 756 aa17.63■□□□□ 0.41
SNX17-204ENST00000453453 KCNV1Q6PIU1 500 aa17.63■□□□□ 0.41
SNX17-204ENST00000453453 OTOP1Q7RTM1 612 aa17.63■□□□□ 0.41
SNX17-204ENST00000453453 FGD4Q96M96 766 aa17.63■□□□□ 0.41
SNX17-204ENST00000453453 MAGEF1Q9HAY2 307 aa17.63■□□□□ 0.41
SNX17-204ENST00000453453 IFNKQ9P0W0 207 aa17.63■□□□□ 0.41
SNX17-204ENST00000453453 V9GYY5 206 aaPredicted RBP17.63■□□□□ 0.41
SNX17-204ENST00000453453 MCM3APO60318 1980 aa17.63■□□□□ 0.41
SNX17-204ENST00000453453 A0A087X0B3 334 aa17.62■□□□□ 0.41
SNX17-204ENST00000453453 SPATA31C2B4DYI2 1134 aa17.62■□□□□ 0.41
SNX17-204ENST00000453453 DDX39AO00148 427 aaKnown RBP17.62■□□□□ 0.41
SNX17-204ENST00000453453 CHMP2AO43633 222 aa17.62■□□□□ 0.41
SNX17-204ENST00000453453 ACTN4O43707 911 aaKnown RBP17.62■□□□□ 0.41
SNX17-204ENST00000453453 COBLO75128 1261 aa17.62■□□□□ 0.41
SNX17-204ENST00000453453 SMC2O95347 1197 aa17.62■□□□□ 0.41
SNX17-204ENST00000453453 PLCG1P19174 1290 aa17.62■□□□□ 0.41
SNX17-204ENST00000453453 ICAM3P32942 547 aa17.62■□□□□ 0.41
SNX17-204ENST00000453453 VEGFBP49765 207 aa17.62■□□□□ 0.41
SNX17-204ENST00000453453 KRT76Q01546 638 aa17.62■□□□□ 0.41
SNX17-204ENST00000453453 SYT10Q6XYQ8 523 aa17.62■□□□□ 0.41
SNX17-204ENST00000453453 SEPT14Q6ZU15 432 aa17.62■□□□□ 0.41
SNX17-204ENST00000453453 TXLNBQ8N3L3 684 aa17.62■□□□□ 0.41
SNX17-204ENST00000453453 MORC4Q8TE76 937 aa17.62■□□□□ 0.41
SNX17-204ENST00000453453 UBXN4Q92575 508 aa17.62■□□□□ 0.41
SNX17-204ENST00000453453 MMTAG2Q9BU76 263 aaKnown RBP17.62■□□□□ 0.41
SNX17-204ENST00000453453 UBXN6Q9BZV1 441 aa17.62■□□□□ 0.41
SNX17-204ENST00000453453 TMX1Q9H3N1 280 aa17.62■□□□□ 0.41
SNX17-204ENST00000453453 STK17AQ9UEE5 414 aa17.62■□□□□ 0.41
SNX17-204ENST00000453453 NFASCO94856 1347 aa17.62■□□□□ 0.41
SNX17-204ENST00000453453 THSD7BQ9C0I4 1608 aa17.62■□□□□ 0.41
SNX17-204ENST00000453453 TNPO2O14787 897 aaKnown RBP17.61■□□□□ 0.41
SNX17-204ENST00000453453 TADA3O75528 432 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 RGS20O76081 388 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 FCGRTP55899 365 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 ITGB3BPQ13352 177 aaPredicted RBP17.61■□□□□ 0.41
SNX17-204ENST00000453453 NCAPHQ15003 741 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 E2F4Q16254 413 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 MIER3Q7Z3K6 550 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 GIMAP8Q8ND71 665 aaPredicted RBP17.61■□□□□ 0.41
SNX17-204ENST00000453453 NEK9Q8TD19 979 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 SOCS4Q8WXH5 440 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 NUDT12Q9BQG2 462 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 UNC45AQ9H3U1 944 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.61■□□□□ 0.41
SNX17-204ENST00000453453 TGFB3P10600 412 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 SFNP31947 248 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 JAK3P52333 1124 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 MAP2K5Q13163 448 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 KIF22Q14807 665 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 EPHA7Q15375 998 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 ERCC6LQ2NKX8 1250 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 ARHGAP29Q52LW3 1261 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 HYIQ5T013 277 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 MORN1Q5T089 497 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 ARMCX2Q7L311 632 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 MSL3Q8N5Y2 521 aaKnown RBP17.61■□□□□ 0.41
SNX17-204ENST00000453453 KCTD17Q8N5Z5 321 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 PLIN2Q99541 437 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 POLR3CQ9BUI4 534 aaPredicted RBP17.61■□□□□ 0.41
SNX17-204ENST00000453453 TUBE1Q9UJT0 475 aa17.61■□□□□ 0.41
SNX17-204ENST00000453453 DHX15O43143 795 aaKnown RBP17.6■□□□□ 0.41
SNX17-204ENST00000453453 KCNA2P16389 499 aa17.6■□□□□ 0.41
SNX17-204ENST00000453453 RPA1P27694 616 aa17.6■□□□□ 0.41
SNX17-204ENST00000453453 RGS2P41220 211 aa17.6■□□□□ 0.41
SNX17-204ENST00000453453 FANCCQ00597 558 aa17.6■□□□□ 0.41
SNX17-204ENST00000453453 SEMA3FQ13275 785 aa17.6■□□□□ 0.41
SNX17-204ENST00000453453 GRB10Q13322 594 aa17.6■□□□□ 0.41
SNX17-204ENST00000453453 POSTNQ15063 836 aa17.6■□□□□ 0.41
SNX17-204ENST00000453453 DPCR1Q3MIW9 517 aa17.6■□□□□ 0.41
SNX17-204ENST00000453453 TMEM119Q4V9L6 283 aa17.6■□□□□ 0.41
SNX17-204ENST00000453453 ZNF746Q6NUN9 644 aaPredicted RBP17.6■□□□□ 0.41
SNX17-204ENST00000453453 PDXDC2PQ6P474 469 aa17.6■□□□□ 0.41
SNX17-204ENST00000453453 MNS1Q8NEH6 495 aa17.6■□□□□ 0.41
SNX17-204ENST00000453453 RDM1Q8NG50 284 aa17.6■□□□□ 0.41
SNX17-204ENST00000453453 MAML3Q96JK9 1138 aa17.6■□□□□ 0.41
SNX17-204ENST00000453453 SENP7Q9BQF6 1050 aa17.6■□□□□ 0.41
SNX17-204ENST00000453453 EIF2AK1Q9BQI3 630 aaKnown RBP17.6■□□□□ 0.41
SNX17-204ENST00000453453 CFHR5Q9BXR6 569 aa17.6■□□□□ 0.41
SNX17-204ENST00000453453 TUFT1Q9NNX1 390 aa17.6■□□□□ 0.41
SNX17-204ENST00000453453 VTA1Q9NP79 307 aa17.6■□□□□ 0.41
SNX17-204ENST00000453453 TMEM51Q9NW97 253 aa17.6■□□□□ 0.41
SNX17-204ENST00000453453 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.6■□□□□ 0.41
SNX17-204ENST00000453453 SAMM50Q9Y512 469 aa17.6■□□□□ 0.41
SNX17-204ENST00000453453 LOXHD1Q8IVV2 1947 aa17.6■□□□□ 0.41
SNX17-204ENST00000453453 DOCK5Q9H7D0 1870 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms