RNA–Protein interactions for RNA: ENST00000451542.5

SMPD4-212, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 796 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-212ENST00000451542 ABHD15Q6UXT9 468 aa13.6□□□□□ -0.23
SMPD4-212ENST00000451542 RSPH3Q86UC2 560 aa13.6□□□□□ -0.23
SMPD4-212ENST00000451542 CKAP2LQ8IYA6 745 aa13.6□□□□□ -0.23
SMPD4-212ENST00000451542 LENG9Q96B70 501 aa13.6□□□□□ -0.23
SMPD4-212ENST00000451542 FAM167AQ96KS9 214 aa13.6□□□□□ -0.23
SMPD4-212ENST00000451542 MBOAT7Q96N66 472 aa13.6□□□□□ -0.23
SMPD4-212ENST00000451542 RNPEPQ9H4A4 650 aa13.6□□□□□ -0.23
SMPD4-212ENST00000451542 IL23AQ9NPF7 189 aa13.6□□□□□ -0.23
SMPD4-212ENST00000451542 CEP131Q9UPN4 1083 aa13.6□□□□□ -0.23
SMPD4-212ENST00000451542 HBP1O60381 514 aa13.59□□□□□ -0.23
SMPD4-212ENST00000451542 CAND2O75155 1236 aa13.59□□□□□ -0.23
SMPD4-212ENST00000451542 ACTN1P12814 892 aa13.59□□□□□ -0.23
SMPD4-212ENST00000451542 CSF2RAP15509 400 aa13.59□□□□□ -0.23
SMPD4-212ENST00000451542 SELPP16109 830 aa13.59□□□□□ -0.23
SMPD4-212ENST00000451542 ITGB8P26012 769 aa13.59□□□□□ -0.23
SMPD4-212ENST00000451542 MARK3P27448 753 aa13.59□□□□□ -0.23
SMPD4-212ENST00000451542 CCL23P55773 120 aa13.59□□□□□ -0.23
SMPD4-212ENST00000451542 ORC2Q13416 577 aaPredicted RBP13.59□□□□□ -0.23
SMPD4-212ENST00000451542 SWSAP1Q6NVH7 229 aa13.59□□□□□ -0.23
SMPD4-212ENST00000451542 MIER3Q7Z3K6 550 aa13.59□□□□□ -0.23
SMPD4-212ENST00000451542 PPP1R13LQ8WUF5 828 aa13.59□□□□□ -0.23
SMPD4-212ENST00000451542 DISC1Q9NRI5 854 aa13.59□□□□□ -0.23
SMPD4-212ENST00000451542 SETD4Q9NVD3 440 aa13.59□□□□□ -0.23
SMPD4-212ENST00000451542 TRIOBPQ9H2D6 2365 aa13.59□□□□□ -0.23
SMPD4-212ENST00000451542 MKI67P46013 3256 aaKnown RBP13.59□□□□□ -0.23
SMPD4-212ENST00000451542 TNRC18O15417 2968 aaPredicted RBP13.59□□□□□ -0.23
SMPD4-212ENST00000451542 TRIP12Q14669 1992 aaPredicted RBP13.58□□□□□ -0.24
SMPD4-212ENST00000451542 IGKV6D-21A0A0A0MT36 114 aa13.58□□□□□ -0.24
SMPD4-212ENST00000451542 POTEB3A0JP26 581 aa13.58□□□□□ -0.24
SMPD4-212ENST00000451542 CCNE2O96020 404 aa13.58□□□□□ -0.24
SMPD4-212ENST00000451542 FGBP02675 491 aa13.58□□□□□ -0.24
SMPD4-212ENST00000451542 PDCP20941 246 aa13.58□□□□□ -0.24
SMPD4-212ENST00000451542 GJB2P29033 226 aa13.58□□□□□ -0.24
SMPD4-212ENST00000451542 TRAPPC10P48553 1259 aa13.58□□□□□ -0.24
SMPD4-212ENST00000451542 RBL2Q08999 1139 aa13.58□□□□□ -0.24
SMPD4-212ENST00000451542 GRIK4Q16099 956 aa13.58□□□□□ -0.24
SMPD4-212ENST00000451542 POTEBQ6S5H4 581 aa13.58□□□□□ -0.24
SMPD4-212ENST00000451542 LRRC8DQ7L1W4 858 aa13.58□□□□□ -0.24
SMPD4-212ENST00000451542 SERINC5Q86VE9 423 aa13.58□□□□□ -0.24
SMPD4-212ENST00000451542 ATP8B4Q8TF62 1192 aa13.58□□□□□ -0.24
SMPD4-212ENST00000451542 LMBR1Q8WVP7 490 aa13.58□□□□□ -0.24
SMPD4-212ENST00000451542 BBXQ8WY36 941 aaPredicted RBP13.58□□□□□ -0.24
SMPD4-212ENST00000451542 TNFRSF25Q93038 417 aa13.58□□□□□ -0.24
SMPD4-212ENST00000451542 RNPC3Q96LT9 517 aaKnown RBP13.58□□□□□ -0.24
SMPD4-212ENST00000451542 UIMC1Q96RL1 719 aa13.58□□□□□ -0.24
SMPD4-212ENST00000451542 NRBP2Q9NSY0 501 aa13.58□□□□□ -0.24
SMPD4-212ENST00000451542 COL1A2P08123 1366 aa13.58□□□□□ -0.24
SMPD4-212ENST00000451542 TREHO43280 583 aa13.57□□□□□ -0.24
SMPD4-212ENST00000451542 CHMP2AO43633 222 aa13.57□□□□□ -0.24
SMPD4-212ENST00000451542 PSMD10O75832 226 aa13.57□□□□□ -0.24
SMPD4-212ENST00000451542 IQCF3P0C7M6 154 aa13.57□□□□□ -0.24
SMPD4-212ENST00000451542 INSRRP14616 1297 aa13.57□□□□□ -0.24
SMPD4-212ENST00000451542 HOXC8P31273 242 aa13.57□□□□□ -0.24
SMPD4-212ENST00000451542 THPOP40225 353 aa13.57□□□□□ -0.24
SMPD4-212ENST00000451542 PLCB4Q15147 1175 aa13.57□□□□□ -0.24
SMPD4-212ENST00000451542 CALCRLQ16602 461 aa13.57□□□□□ -0.24
SMPD4-212ENST00000451542 LRIT3Q3SXY7 679 aa13.57□□□□□ -0.24
SMPD4-212ENST00000451542 ZNF484Q5JVG2 852 aa13.57□□□□□ -0.24
SMPD4-212ENST00000451542 ETNPPLQ8TBG4 499 aa13.57□□□□□ -0.24
SMPD4-212ENST00000451542 PCYT2Q99447 389 aa13.57□□□□□ -0.24
SMPD4-212ENST00000451542 FTOQ9C0B1 505 aaKnown RBP eCLIP13.57□□□□□ -0.24
SMPD4-212ENST00000451542 GABBR1Q9UBS5 961 aa13.57□□□□□ -0.24
SMPD4-212ENST00000451542 TUBE1Q9UJT0 475 aa13.57□□□□□ -0.24
SMPD4-212ENST00000451542 TELO2Q9Y4R8 837 aa13.57□□□□□ -0.24
SMPD4-212ENST00000451542 MAFBQ9Y5Q3 323 aaPredicted RBP13.57□□□□□ -0.24
SMPD4-212ENST00000451542 RSPH10B2B2RC85 870 aa13.56□□□□□ -0.24
SMPD4-212ENST00000451542 M0QZ92 97 aa13.56□□□□□ -0.24
SMPD4-212ENST00000451542 SLC37A4O43826 429 aa13.56□□□□□ -0.24
SMPD4-212ENST00000451542 EDIL3O43854 480 aa13.56□□□□□ -0.24
SMPD4-212ENST00000451542 NEMFO60524 1076 aa13.56□□□□□ -0.24
SMPD4-212ENST00000451542 CD2BP2O95400 341 aaKnown RBP13.56□□□□□ -0.24
SMPD4-212ENST00000451542 RSPH10BP0C881 870 aa13.56□□□□□ -0.24
SMPD4-212ENST00000451542 CKBP12277 381 aa13.56□□□□□ -0.24
SMPD4-212ENST00000451542 ATP2B1P20020 1258 aa13.56□□□□□ -0.24
SMPD4-212ENST00000451542 IGBP1P78318 339 aa13.56□□□□□ -0.24
SMPD4-212ENST00000451542 SHHQ15465 462 aa13.56□□□□□ -0.24
SMPD4-212ENST00000451542 LARP1BQ659C4 914 aaKnown RBP13.56□□□□□ -0.24
SMPD4-212ENST00000451542 MCTP1Q6DN14 999 aa13.56□□□□□ -0.24
SMPD4-212ENST00000451542 NOSTRINQ8IVI9 506 aa13.56□□□□□ -0.24
SMPD4-212ENST00000451542 CCDC60Q8IWA6 550 aaPredicted RBP13.56□□□□□ -0.24
SMPD4-212ENST00000451542 HSCBQ8IWL3 235 aa13.56□□□□□ -0.24
SMPD4-212ENST00000451542 SCLYQ96I15 445 aa13.56□□□□□ -0.24
SMPD4-212ENST00000451542 WNT8AQ9H1J5 351 aa13.56□□□□□ -0.24
SMPD4-212ENST00000451542 UNC45AQ9H3U1 944 aa13.56□□□□□ -0.24
SMPD4-212ENST00000451542 KCNMB3Q9NPA1 279 aa13.56□□□□□ -0.24
SMPD4-212ENST00000451542 PCDHA12Q9UN75 941 aa13.56□□□□□ -0.24
SMPD4-212ENST00000451542 UMODL1Q5DID0 1318 aa13.56□□□□□ -0.24
SMPD4-212ENST00000451542 K7ELQ4 463 aaPredicted RBP13.55□□□□□ -0.24
SMPD4-212ENST00000451542 MAGEB2O15479 319 aa13.55□□□□□ -0.24
SMPD4-212ENST00000451542 HSP90AA1P07900 732 aaKnown RBP13.55□□□□□ -0.24
SMPD4-212ENST00000451542 ZNF200P98182 395 aaPredicted RBP13.55□□□□□ -0.24
SMPD4-212ENST00000451542 PPP2R5CQ13362 524 aa13.55□□□□□ -0.24
SMPD4-212ENST00000451542 CUL4AQ13619 759 aa13.55□□□□□ -0.24
SMPD4-212ENST00000451542 EARS2Q5JPH6 523 aaKnown RBP13.55□□□□□ -0.24
SMPD4-212ENST00000451542 ZNF365Q70YC5 407 aa13.55□□□□□ -0.24
SMPD4-212ENST00000451542 DEFB128Q7Z7B8 93 aa13.55□□□□□ -0.24
SMPD4-212ENST00000451542 POTEDQ86YR6 584 aa13.55□□□□□ -0.24
SMPD4-212ENST00000451542 SNX21Q969T3 373 aa13.55□□□□□ -0.24
SMPD4-212ENST00000451542 INTS4Q96HW7 963 aaKnown RBP13.55□□□□□ -0.24
SMPD4-212ENST00000451542 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.55□□□□□ -0.247e-7■■■■□ 19.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms