RNA–Protein interactions for RNA: ENST00000449943.5

SYVN1-204, Transcript of synoviolin 1, humanhuman

TSL 2

Gene SYVN1, Length 4,547 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-204ENST00000449943 SH3GL2Q99962 352 aa12.41□□□□□ -0.42
SYVN1-204ENST00000449943 GRID2IPA4D2P6 1211 aa12.41□□□□□ -0.42
SYVN1-204ENST00000449943 PPP1R12BO60237 982 aaPredicted RBP12.41□□□□□ -0.42
SYVN1-204ENST00000449943 GNA14O95837 355 aa12.41□□□□□ -0.42
SYVN1-204ENST00000449943 PPM1EQ8WY54 764 aa12.41□□□□□ -0.42
SYVN1-204ENST00000449943 CAVIN3Q969G5 261 aa12.41□□□□□ -0.42
SYVN1-204ENST00000449943 PCDHA1Q9Y5I3 950 aa12.41□□□□□ -0.42
SYVN1-204ENST00000449943 NDUFAB1O14561 156 aa12.41□□□□□ -0.42
SYVN1-204ENST00000449943 RGL2O15211 777 aa12.41□□□□□ -0.42
SYVN1-204ENST00000449943 RAD51CO43502 376 aa12.41□□□□□ -0.42
SYVN1-204ENST00000449943 CEP104O60308 925 aa12.41□□□□□ -0.42
SYVN1-204ENST00000449943 TAL1P17542 331 aaPredicted RBP12.41□□□□□ -0.42
SYVN1-204ENST00000449943 PTK2Q05397 1052 aa12.41□□□□□ -0.42
SYVN1-204ENST00000449943 SHROOM1Q2M3G4 852 aaPredicted RBP12.41□□□□□ -0.42
SYVN1-204ENST00000449943 AP1M1Q9BXS5 423 aa12.41□□□□□ -0.42
SYVN1-204ENST00000449943 RBAK-RBAKDNI3L0D1 243 aa12.41□□□□□ -0.42
SYVN1-204ENST00000449943 PSMC6P62333 389 aa12.41□□□□□ -0.42
SYVN1-204ENST00000449943 CYP4A11Q02928 519 aa12.41□□□□□ -0.42
SYVN1-204ENST00000449943 RPS6KA1Q15418 735 aa12.41□□□□□ -0.42
SYVN1-204ENST00000449943 MEI1Q5TIA1 1274 aa12.41□□□□□ -0.42
SYVN1-204ENST00000449943 RUBCNQ92622 972 aa12.41□□□□□ -0.42
SYVN1-204ENST00000449943 FAM107BQ9H098 131 aa12.41□□□□□ -0.42
SYVN1-204ENST00000449943 FAM169AQ9Y6X4 670 aa12.41□□□□□ -0.42
SYVN1-204ENST00000449943 GAKO14976 1311 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 GRIN2DO15399 1336 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.4□□□□□ -0.42
SYVN1-204ENST00000449943 SEPT2Q15019 361 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 GLE1Q53GS7 698 aaKnown RBP12.4□□□□□ -0.42
SYVN1-204ENST00000449943 GBP6Q6ZN66 633 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 SUPT20HQ8NEM7 779 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 KCTD10Q9H3F6 313 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 SNHG28P0DPA3 235 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 HPDP32754 393 aaPredicted RBP12.4□□□□□ -0.42
SYVN1-204ENST00000449943 CLK2P49760 499 aaKnown RBP12.4□□□□□ -0.42
SYVN1-204ENST00000449943 CACNB3P54284 484 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 GUCY1A3Q02108 690 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 DOK7Q18PE1 504 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 TMEM132AQ24JP5 1023 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 QRICH1Q2TAL8 776 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 USH1GQ495M9 461 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 SFR1Q86XK3 245 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 ANO3Q9BYT9 981 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 GDF3Q9NR23 364 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 NRAPQ86VF7 1730 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 ZNF233A6NK53 670 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 TNNC1P63316 161 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 TCP10Q12799 353 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 PPP1R18Q6NYC8 613 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 KRT27Q7Z3Y8 459 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 EFCAB13Q8IY85 973 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 SEPT12Q8IYM1 358 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 SYN2Q92777 582 aaPredicted RBP12.4□□□□□ -0.42
SYVN1-204ENST00000449943 ARMCX3Q9UH62 379 aaPredicted RBP12.4□□□□□ -0.42
SYVN1-204ENST00000449943 PCDHA2Q9Y5H9 948 aa12.4□□□□□ -0.42
SYVN1-204ENST00000449943 SBF2Q86WG5 1849 aa12.4□□□□□ -0.43
SYVN1-204ENST00000449943 SERPINB2P05120 415 aa12.4□□□□□ -0.43
SYVN1-204ENST00000449943 GCFC2P16383 781 aaKnown RBP12.4□□□□□ -0.43
SYVN1-204ENST00000449943 GABPAQ06546 454 aa12.4□□□□□ -0.43
SYVN1-204ENST00000449943 ZNF571Q7Z3V5 609 aaPredicted RBP12.4□□□□□ -0.43
SYVN1-204ENST00000449943 GANQ9H2C0 597 aa12.4□□□□□ -0.43
SYVN1-204ENST00000449943 BCAS3Q9H6U6 928 aa12.4□□□□□ -0.43
SYVN1-204ENST00000449943 CLIC2O15247 247 aa12.39□□□□□ -0.43
SYVN1-204ENST00000449943 MYBP10242 640 aa12.39□□□□□ -0.43
SYVN1-204ENST00000449943 SHMT1P34896 483 aa12.39□□□□□ -0.43
SYVN1-204ENST00000449943 PDE4CQ08493 712 aa12.39□□□□□ -0.43
SYVN1-204ENST00000449943 ARSHQ5FYA8 562 aa12.39□□□□□ -0.43
SYVN1-204ENST00000449943 CEP85LQ5SZL2 805 aa12.39□□□□□ -0.43
SYVN1-204ENST00000449943 ZNF772Q68DY9 489 aaPredicted RBP12.39□□□□□ -0.43
SYVN1-204ENST00000449943 GJB7Q6PEY0 223 aa12.39□□□□□ -0.43
SYVN1-204ENST00000449943 C15orf52Q6ZUT6 534 aaKnown RBP12.39□□□□□ -0.43
SYVN1-204ENST00000449943 DDX42Q86XP3 938 aaKnown RBP eCLIP12.39□□□□□ -0.437e-6■■■□□ 15.5
SYVN1-204ENST00000449943 ERMNQ8TAM6 284 aa12.39□□□□□ -0.43
SYVN1-204ENST00000449943 FAM163AQ96GL9 167 aaPredicted RBP12.39□□□□□ -0.43
SYVN1-204ENST00000449943 RNPC3Q96LT9 517 aaKnown RBP12.39□□□□□ -0.43
SYVN1-204ENST00000449943 DHX36Q9H2U1 1008 aaKnown RBP12.39□□□□□ -0.43
SYVN1-204ENST00000449943 RNF14Q9UBS8 474 aa12.39□□□□□ -0.43
SYVN1-204ENST00000449943 NOVP48745 357 aa12.39□□□□□ -0.43
SYVN1-204ENST00000449943 TADA2BQ86TJ2 420 aa12.39□□□□□ -0.43
SYVN1-204ENST00000449943 INPP4AQ96PE3 977 aaPredicted RBP12.39□□□□□ -0.43
SYVN1-204ENST00000449943 VEZTQ9HBM0 779 aa12.39□□□□□ -0.43
SYVN1-204ENST00000449943 PCDHGC5Q9Y5F6 944 aa12.39□□□□□ -0.43
SYVN1-204ENST00000449943 EXOC3L4Q17RC7 722 aa12.39□□□□□ -0.43
SYVN1-204ENST00000449943 GPATCH4Q5T3I0 446 aaKnown RBP12.39□□□□□ -0.43
SYVN1-204ENST00000449943 USP38Q8NB14 1042 aa12.39□□□□□ -0.43
SYVN1-204ENST00000449943 RSPH10B2B2RC85 870 aa12.38□□□□□ -0.43
SYVN1-204ENST00000449943 RSPH10BP0C881 870 aa12.38□□□□□ -0.43
SYVN1-204ENST00000449943 XRCC5P13010 732 aaKnown RBP12.38□□□□□ -0.43
SYVN1-204ENST00000449943 UCHL3P15374 230 aa12.38□□□□□ -0.43
SYVN1-204ENST00000449943 CDC37Q16543 378 aaPredicted RBP12.38□□□□□ -0.43
SYVN1-204ENST00000449943 CATSPER3Q86XQ3 398 aa12.38□□□□□ -0.43
SYVN1-204ENST00000449943 OR2W6PQ8NHA6 318 aa12.38□□□□□ -0.43
SYVN1-204ENST00000449943 REEP2Q9BRK0 252 aa12.38□□□□□ -0.43
SYVN1-204ENST00000449943 BCCIPQ9P287 314 aaKnown RBP eCLIP12.38□□□□□ -0.43
SYVN1-204ENST00000449943 PLAAQ9Y263 795 aa12.38□□□□□ -0.43
SYVN1-204ENST00000449943 PCDHB13Q9Y5F0 798 aa12.38□□□□□ -0.43
SYVN1-204ENST00000449943 IGKV6D-41A0A0C4DH26 115 aa12.38□□□□□ -0.43
SYVN1-204ENST00000449943 SFI1A8K8P3 1242 aa12.38□□□□□ -0.43
SYVN1-204ENST00000449943 AFPP02771 609 aaKnown RBP12.38□□□□□ -0.43
SYVN1-204ENST00000449943 TNFRSF8P28908 595 aa12.38□□□□□ -0.43
SYVN1-204ENST00000449943 NFIAQ12857 509 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms