RNA–Protein interactions for RNA: ENST00000449505.5

PBRM1-216, Transcript of polybromo 1, humanhuman

TSL 3

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-216ENST00000449505 MBLAC1A4D2B0 266 aaPredicted RBP7.88□□□□□ -1.15
PBRM1-216ENST00000449505 GOLGA8AA7E2F4 631 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 GOLGA8BA8MQT2 603 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 H3BNC9 293 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 CDC45O75419 566 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 UPP2O95045 317 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 RB1P06400 928 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 STAG3L1P0CL83 205 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 GHRP10912 638 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 ITGB5P18084 799 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 RXRAP19793 462 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 KCNA5P22460 613 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 MARK3P27448 753 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 CTNNB1P35222 781 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 ADAM17P78536 824 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 SETQ01105 290 aaPredicted RBP7.88□□□□□ -1.15
PBRM1-216ENST00000449505 HIC1Q14526 733 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 UBE2SQ16763 222 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 LEXMQ3ZCV2 418 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 EPC2Q52LR7 807 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 FAM160B1Q5W0V3 765 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 APOA5Q6Q788 366 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 TMEM192Q8IY95 271 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 NEK1Q96PY6 1258 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 C17orf80Q9BSJ5 609 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 NSUN3Q9H649 340 aaKnown RBP7.88□□□□□ -1.15
PBRM1-216ENST00000449505 RIC8AQ9NPQ8 531 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 PCDHA6Q9UN73 950 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 PCDHA8Q9Y5H6 950 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 UBIAD1Q9Y5Z9 338 aa7.88□□□□□ -1.15
PBRM1-216ENST00000449505 FSD2A1L4K1 749 aa7.87□□□□□ -1.15
PBRM1-216ENST00000449505 C5orf67F2Z3F1 127 aa7.87□□□□□ -1.15
PBRM1-216ENST00000449505 ZNF76P36508 570 aa7.87□□□□□ -1.15
PBRM1-216ENST00000449505 IRX6P78412 446 aaPredicted RBP7.87□□□□□ -1.15
PBRM1-216ENST00000449505 MRPS6P82932 125 aaKnown RBP7.87□□□□□ -1.15
PBRM1-216ENST00000449505 PAK2Q13177 524 aa7.87□□□□□ -1.15
PBRM1-216ENST00000449505 GPM6BQ13491 265 aa7.87□□□□□ -1.15
PBRM1-216ENST00000449505 BTG3Q14201 252 aaPredicted RBP7.87□□□□□ -1.15
PBRM1-216ENST00000449505 NECTIN1Q15223 517 aa7.87□□□□□ -1.15
PBRM1-216ENST00000449505 TCTN1Q2MV58 587 aa7.87□□□□□ -1.15
PBRM1-216ENST00000449505 CEP55Q53EZ4 464 aa7.87□□□□□ -1.15
PBRM1-216ENST00000449505 KRT40Q6A162 431 aa7.87□□□□□ -1.15
PBRM1-216ENST00000449505 WWC2Q6AWC2 1192 aa7.87□□□□□ -1.15
PBRM1-216ENST00000449505 DHX32Q7L7V1 743 aaKnown RBP7.87□□□□□ -1.15
PBRM1-216ENST00000449505 NIPA1Q7RTP0 329 aa7.87□□□□□ -1.15
PBRM1-216ENST00000449505 PLPPR4Q7Z2D5 763 aa7.87□□□□□ -1.15
PBRM1-216ENST00000449505 CCDC82Q8N4S0 544 aa7.87□□□□□ -1.15
PBRM1-216ENST00000449505 BANK1Q8NDB2 785 aa7.87□□□□□ -1.15
PBRM1-216ENST00000449505 NECAB3Q96P71 396 aaPredicted RBP7.87□□□□□ -1.15
PBRM1-216ENST00000449505 POP1Q99575 1024 aaKnown RBP7.87□□□□□ -1.15
PBRM1-216ENST00000449505 MXRA8Q9BRK3 442 aa7.87□□□□□ -1.15
PBRM1-216ENST00000449505 PLVAPQ9BX97 442 aa7.87□□□□□ -1.15
PBRM1-216ENST00000449505 ANO3Q9BYT9 981 aa7.87□□□□□ -1.15
PBRM1-216ENST00000449505 KCNH7Q9NS40 1196 aa7.87□□□□□ -1.15
PBRM1-216ENST00000449505 BARHL2Q9NY43 387 aa7.87□□□□□ -1.15
PBRM1-216ENST00000449505 PKD2L1Q9P0L9 805 aa7.87□□□□□ -1.15
PBRM1-216ENST00000449505 TRPV2Q9Y5S1 764 aa7.87□□□□□ -1.15
PBRM1-216ENST00000449505 CDY2AQ9Y6F7 541 aa7.87□□□□□ -1.15
PBRM1-216ENST00000449505 COL1A2P08123 1366 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 TCF20Q9UGU0 1960 aaKnown RBP7.86□□□□□ -1.15
PBRM1-216ENST00000449505 KLF18A0A0U1RQI7 1052 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.86□□□□□ -1.15
PBRM1-216ENST00000449505 GSTTP1A0A1W2PQM5 241 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 BACH1O14867 736 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 ATP9AO75110 1047 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 GNA11P29992 359 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 SSTR3P32745 418 aaPredicted RBP7.86□□□□□ -1.15
PBRM1-216ENST00000449505 SREBF1P36956 1147 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 METAP2P50579 478 aaKnown RBP eCLIP7.86□□□□□ -1.15
PBRM1-216ENST00000449505 STAT5BP51692 787 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 ACTR2P61160 394 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 IGBP1P78318 339 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 AKAP17AQ02040 695 aaKnown RBP7.86□□□□□ -1.15
PBRM1-216ENST00000449505 MGAT3Q09327 533 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 LPIN1Q14693 890 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 NAALADL2Q58DX5 795 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 TMEM31Q5JXX7 168 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 FBXO47Q5MNV8 452 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 PTCRAQ6ISU1 281 aaPredicted RBP7.86□□□□□ -1.15
PBRM1-216ENST00000449505 SPRED2Q7Z698 418 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 NPAS4Q8IUM7 802 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 CMTR2Q8IYT2 770 aaKnown RBP7.86□□□□□ -1.15
PBRM1-216ENST00000449505 REXO1Q8N1G1 1221 aaKnown RBP7.86□□□□□ -1.15
PBRM1-216ENST00000449505 CMTR1Q8N1G2 835 aaKnown RBP7.86□□□□□ -1.15
PBRM1-216ENST00000449505 ZNF710Q8N1W2 664 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 NME8Q8N427 588 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 CCDC148Q8NFR7 591 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 BICD2Q8TD16 824 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 DNAJB3Q8WWF6 145 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 PABPC5Q96DU9 382 aaKnown RBP7.86□□□□□ -1.15
PBRM1-216ENST00000449505 LRRC2Q9BYS8 371 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 FAM49AQ9H0Q0 323 aaPredicted RBP7.86□□□□□ -1.15
PBRM1-216ENST00000449505 C6orf50Q9HD87 102 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 PRKAG3Q9UGI9 489 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 NAP1L2Q9ULW6 460 aaPredicted RBP7.86□□□□□ -1.15
PBRM1-216ENST00000449505 CEP131Q9UPN4 1083 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 ARIH1Q9Y4X5 557 aaPredicted RBP7.86□□□□□ -1.15
PBRM1-216ENST00000449505 PCDHA2Q9Y5H9 948 aa7.86□□□□□ -1.15
PBRM1-216ENST00000449505 IGSF9BQ9UPX0 1349 aa7.85□□□□□ -1.15
PBRM1-216ENST00000449505 KDM3AQ9Y4C1 1321 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms