RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 SWSAP1Q6NVH7 229 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 PDXDC2PQ6P474 469 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 ABHD15Q6UXT9 468 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 PLPPR4Q7Z2D5 763 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 MIER3Q7Z3K6 550 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 GJA10Q969M2 543 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 TRIM43Q96BQ3 446 aaPredicted RBP15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 UNC45AQ9H3U1 944 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 KCNMB3Q9NPA1 279 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 ZNF302Q9NR11 478 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 DISC1Q9NRI5 854 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 DOCK5Q9H7D0 1870 aa15.82■□□□□ 0.12
GTF3C3-206ENST00000448539 VPS37CA5D8V6 355 aaPredicted RBP15.81■□□□□ 0.12
GTF3C3-206ENST00000448539 PSMD10O75832 226 aa15.81■□□□□ 0.12
GTF3C3-206ENST00000448539 SLC26A2P50443 739 aa15.81■□□□□ 0.12
GTF3C3-206ENST00000448539 MDM2Q00987 491 aaPredicted RBP15.81■□□□□ 0.12
GTF3C3-206ENST00000448539 ORC2Q13416 577 aaPredicted RBP15.81■□□□□ 0.12
GTF3C3-206ENST00000448539 ZNF174Q15697 407 aa15.81■□□□□ 0.12
GTF3C3-206ENST00000448539 TTC38Q5R3I4 469 aa15.81■□□□□ 0.12
GTF3C3-206ENST00000448539 CKAP2LQ8IYA6 745 aa15.81■□□□□ 0.12
GTF3C3-206ENST00000448539 CCDC155Q8N6L0 562 aa15.81■□□□□ 0.12
GTF3C3-206ENST00000448539 RDM1Q8NG50 284 aa15.81■□□□□ 0.12
GTF3C3-206ENST00000448539 PCYT2Q99447 389 aa15.81■□□□□ 0.12
GTF3C3-206ENST00000448539 HIPK3Q9H422 1215 aa15.81■□□□□ 0.12
GTF3C3-206ENST00000448539 RNPEPQ9H4A4 650 aa15.81■□□□□ 0.12
GTF3C3-206ENST00000448539 TBX21Q9UL17 535 aa15.81■□□□□ 0.12
GTF3C3-206ENST00000448539 TRPC6Q9Y210 931 aa15.81■□□□□ 0.12
GTF3C3-206ENST00000448539 NRCAMQ92823 1304 aa15.8■□□□□ 0.12
GTF3C3-206ENST00000448539 IGKV6D-21A0A0A0MT36 114 aa15.8■□□□□ 0.12
GTF3C3-206ENST00000448539 TIMP1P01033 207 aa15.8■□□□□ 0.12
GTF3C3-206ENST00000448539 CYP2C9P11712 490 aa15.8■□□□□ 0.12
GTF3C3-206ENST00000448539 PPFIA1Q13136 1202 aa15.8■□□□□ 0.12
GTF3C3-206ENST00000448539 BFSP2Q13515 415 aa15.8■□□□□ 0.12
GTF3C3-206ENST00000448539 RETREG2Q8NC44 543 aa15.8■□□□□ 0.12
GTF3C3-206ENST00000448539 AFAP1L1Q8TED9 768 aa15.8■□□□□ 0.12
GTF3C3-206ENST00000448539 HAS1Q92839 578 aa15.8■□□□□ 0.12
GTF3C3-206ENST00000448539 ATP6V0A1Q93050 837 aa15.8■□□□□ 0.12
GTF3C3-206ENST00000448539 GDF15Q99988 308 aa15.8■□□□□ 0.12
GTF3C3-206ENST00000448539 PPP1R12CQ9BZL4 782 aa15.8■□□□□ 0.12
GTF3C3-206ENST00000448539 GABBR1Q9UBS5 961 aa15.8■□□□□ 0.12
GTF3C3-206ENST00000448539 LAMA3Q16787 3333 aa15.8■□□□□ 0.12
GTF3C3-206ENST00000448539 A0A1W2PPC1 479 aa15.79■□□□□ 0.12
GTF3C3-206ENST00000448539 POTEB3A0JP26 581 aa15.79■□□□□ 0.12
GTF3C3-206ENST00000448539 TXKP42681 527 aa15.79■□□□□ 0.12
GTF3C3-206ENST00000448539 MAGEA10P43363 369 aaPredicted RBP15.79■□□□□ 0.12
GTF3C3-206ENST00000448539 PTK7Q13308 1070 aa15.79■□□□□ 0.12
GTF3C3-206ENST00000448539 PPP2R5CQ13362 524 aa15.79■□□□□ 0.12
GTF3C3-206ENST00000448539 RILPL1Q5EBL4 403 aa15.79■□□□□ 0.12
GTF3C3-206ENST00000448539 POTEBQ6S5H4 581 aa15.79■□□□□ 0.12
GTF3C3-206ENST00000448539 CCDC60Q8IWA6 550 aaPredicted RBP15.79■□□□□ 0.12
GTF3C3-206ENST00000448539 TMEM199Q8N511 208 aa15.79■□□□□ 0.12
GTF3C3-206ENST00000448539 BADQ92934 168 aa15.79■□□□□ 0.12
GTF3C3-206ENST00000448539 SETD4Q9NVD3 440 aa15.79■□□□□ 0.12
GTF3C3-206ENST00000448539 PCDHA12Q9UN75 941 aa15.79■□□□□ 0.12
GTF3C3-206ENST00000448539 RRN3P2A6NIE6 340 aa15.78■□□□□ 0.12
GTF3C3-206ENST00000448539 WNT7AO00755 349 aa15.78■□□□□ 0.12
GTF3C3-206ENST00000448539 HBP1O60381 514 aa15.78■□□□□ 0.12
GTF3C3-206ENST00000448539 SYT1P21579 422 aa15.78■□□□□ 0.12
GTF3C3-206ENST00000448539 BMP8BP34820 402 aa15.78■□□□□ 0.12
GTF3C3-206ENST00000448539 IGBP1P78318 339 aa15.78■□□□□ 0.12
GTF3C3-206ENST00000448539 ZNF200P98182 395 aaPredicted RBP15.78■□□□□ 0.12
GTF3C3-206ENST00000448539 BECN1Q14457 450 aa15.78■□□□□ 0.12
GTF3C3-206ENST00000448539 PLCB4Q15147 1175 aa15.78■□□□□ 0.12
GTF3C3-206ENST00000448539 GRIK4Q16099 956 aa15.78■□□□□ 0.12
GTF3C3-206ENST00000448539 NCAPH2Q6IBW4 605 aa15.78■□□□□ 0.12
GTF3C3-206ENST00000448539 TRMT1LQ7Z2T5 733 aaKnown RBP15.78■□□□□ 0.12
GTF3C3-206ENST00000448539 BRAPQ7Z569 592 aa15.78■□□□□ 0.12
GTF3C3-206ENST00000448539 CAGE1Q8TC20 777 aa15.78■□□□□ 0.12
GTF3C3-206ENST00000448539 LMBR1Q8WVP7 490 aa15.78■□□□□ 0.12
GTF3C3-206ENST00000448539 FAM167AQ96KS9 214 aa15.78■□□□□ 0.12
GTF3C3-206ENST00000448539 NOC4LQ9BVI4 516 aaKnown RBP15.78■□□□□ 0.12
GTF3C3-206ENST00000448539 VAV3Q9UKW4 847 aa15.78■□□□□ 0.12
GTF3C3-206ENST00000448539 MAFBQ9Y5Q3 323 aaPredicted RBP15.78■□□□□ 0.12
GTF3C3-206ENST00000448539 SOX1O00570 391 aaPredicted RBP15.77■□□□□ 0.12
GTF3C3-206ENST00000448539 TREHO43280 583 aa15.77■□□□□ 0.12
GTF3C3-206ENST00000448539 OR52Z1P0C646 297 aa15.77■□□□□ 0.12
GTF3C3-206ENST00000448539 INSRRP14616 1297 aa15.77■□□□□ 0.12
GTF3C3-206ENST00000448539 CYP2C18P33260 490 aa15.77■□□□□ 0.12
GTF3C3-206ENST00000448539 FPGSQ05932 587 aa15.77■□□□□ 0.12
GTF3C3-206ENST00000448539 PPIGQ13427 754 aaKnown RBP eCLIP15.77■□□□□ 0.127e-6■□□□□ 9.9
GTF3C3-206ENST00000448539 MFSD5Q6N075 450 aa15.77■□□□□ 0.12
GTF3C3-206ENST00000448539 ATP8B4Q8TF62 1192 aa15.77■□□□□ 0.12
GTF3C3-206ENST00000448539 BBXQ8WY36 941 aaPredicted RBP15.77■□□□□ 0.12
GTF3C3-206ENST00000448539 MTMR9Q96QG7 549 aa15.77■□□□□ 0.12
GTF3C3-206ENST00000448539 UBE2OQ9C0C9 1292 aaKnown RBP15.77■□□□□ 0.12
GTF3C3-206ENST00000448539 TTC12Q9H892 705 aaPredicted RBP15.77■□□□□ 0.12
GTF3C3-206ENST00000448539 NRBP2Q9NSY0 501 aa15.77■□□□□ 0.12
GTF3C3-206ENST00000448539 IGSF9BQ9UPX0 1349 aa15.76■□□□□ 0.11
GTF3C3-206ENST00000448539 PITPNM1O00562 1244 aa15.76■□□□□ 0.11
GTF3C3-206ENST00000448539 DKC1O60832 514 aaKnown RBP eCLIP15.76■□□□□ 0.11
GTF3C3-206ENST00000448539 ITGB8P26012 769 aa15.76■□□□□ 0.11
GTF3C3-206ENST00000448539 HOXC8P31273 242 aa15.76■□□□□ 0.11
GTF3C3-206ENST00000448539 CCL23P55773 120 aa15.76■□□□□ 0.11
GTF3C3-206ENST00000448539 PSMC5P62195 406 aa15.76■□□□□ 0.11
GTF3C3-206ENST00000448539 NBR1Q14596 966 aa15.76■□□□□ 0.11
GTF3C3-206ENST00000448539 EPHA7Q15375 998 aa15.76■□□□□ 0.11
GTF3C3-206ENST00000448539 TMEM266Q2M3C6 531 aa15.76■□□□□ 0.11
GTF3C3-206ENST00000448539 ZNF484Q5JVG2 852 aa15.76■□□□□ 0.11
GTF3C3-206ENST00000448539 B3GNT9Q6UX72 402 aa15.76■□□□□ 0.11
GTF3C3-206ENST00000448539 SERINC5Q86VE9 423 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms