RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 TTC31Q49AM3 519 aaPredicted RBP14.16□□□□□ -0.14
SHC1-210ENST00000448116 ALS2CLQ60I27 953 aa14.16□□□□□ -0.14
SHC1-210ENST00000448116 FAM163AQ96GL9 167 aaPredicted RBP14.16□□□□□ -0.14
SHC1-210ENST00000448116 KDM3AQ9Y4C1 1321 aa14.16□□□□□ -0.14
SHC1-210ENST00000448116 TAL1P17542 331 aaPredicted RBP14.16□□□□□ -0.14
SHC1-210ENST00000448116 PTK2Q05397 1052 aa14.16□□□□□ -0.14
SHC1-210ENST00000448116 USH1GQ495M9 461 aa14.16□□□□□ -0.14
SHC1-210ENST00000448116 ZNF572Q7Z3I7 529 aaPredicted RBP14.16□□□□□ -0.14
SHC1-210ENST00000448116 ARMCX3Q9UH62 379 aaPredicted RBP14.16□□□□□ -0.14
SHC1-210ENST00000448116 RREB1Q92766 1687 aa14.15□□□□□ -0.14
SHC1-210ENST00000448116 SEPT2Q15019 361 aa14.15□□□□□ -0.14
SHC1-210ENST00000448116 RNF217Q8TC41 542 aa14.15□□□□□ -0.14
SHC1-210ENST00000448116 AP1M1Q9BXS5 423 aa14.15□□□□□ -0.14
SHC1-210ENST00000448116 GAKO14976 1311 aa14.15□□□□□ -0.14
SHC1-210ENST00000448116 SFI1A8K8P3 1242 aa14.15□□□□□ -0.14
SHC1-210ENST00000448116 CLIC2O15247 247 aa14.15□□□□□ -0.14
SHC1-210ENST00000448116 GCFC2P16383 781 aaKnown RBP14.15□□□□□ -0.14
SHC1-210ENST00000448116 GABPAQ06546 454 aa14.15□□□□□ -0.14
SHC1-210ENST00000448116 GPATCH4Q5T3I0 446 aaKnown RBP14.15□□□□□ -0.14
SHC1-210ENST00000448116 SFR1Q86XK3 245 aa14.15□□□□□ -0.14
SHC1-210ENST00000448116 GPATCH11Q8N954 259 aa14.15□□□□□ -0.14
SHC1-210ENST00000448116 CASKIN2Q8WXE0 1202 aa14.15□□□□□ -0.14
SHC1-210ENST00000448116 ANO3Q9BYT9 981 aa14.15□□□□□ -0.14
SHC1-210ENST00000448116 FAM107BQ9H098 131 aa14.15□□□□□ -0.14
SHC1-210ENST00000448116 BCAS3Q9H6U6 928 aa14.15□□□□□ -0.14
SHC1-210ENST00000448116 GRID2IPA4D2P6 1211 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 NDUFAB1O14561 156 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 RAD51CO43502 376 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 HLA-DOAP06340 250 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 SNHG28P0DPA3 235 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 C15orf52Q6ZUT6 534 aaKnown RBP14.14□□□□□ -0.15
SHC1-210ENST00000448116 ZC3H12CQ9C0D7 883 aaKnown RBP14.14□□□□□ -0.15
SHC1-210ENST00000448116 DHX36Q9H2U1 1008 aaKnown RBP14.14□□□□□ -0.15
SHC1-210ENST00000448116 PCDHB13Q9Y5F0 798 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 MYH1P12882 1939 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 EIF3HO15372 352 aaKnown RBP eCLIP14.14□□□□□ -0.154e-6■□□□□ 9.5
SHC1-210ENST00000448116 SHMT1P34896 483 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 SLC20A2Q08357 652 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 NFIAQ12857 509 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 GLE1Q53GS7 698 aaKnown RBP14.14□□□□□ -0.15
SHC1-210ENST00000448116 ARSHQ5FYA8 562 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 MEI1Q5TIA1 1274 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 KCTD10Q9H3F6 313 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 BBOX1O75936 387 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 HPDP32754 393 aaPredicted RBP14.14□□□□□ -0.15
SHC1-210ENST00000448116 CLK2P49760 499 aaKnown RBP14.14□□□□□ -0.15
SHC1-210ENST00000448116 RBM5P52756 815 aaKnown RBP eCLIP14.14□□□□□ -0.15
SHC1-210ENST00000448116 TNNC1P63316 161 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 EXOC3L4Q17RC7 722 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 SLC30A10Q6XR72 485 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 ZNF571Q7Z3V5 609 aaPredicted RBP14.14□□□□□ -0.15
SHC1-210ENST00000448116 PACS2Q86VP3 889 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 DDX42Q86XP3 938 aaKnown RBP eCLIP14.14□□□□□ -0.15
SHC1-210ENST00000448116 ZFPM1Q8IX07 1006 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 PPM1EQ8WY54 764 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 SYN2Q92777 582 aaPredicted RBP14.14□□□□□ -0.15
SHC1-210ENST00000448116 RNF14Q9UBS8 474 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 DNM3Q9UQ16 869 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 FAM169AQ9Y6X4 670 aa14.14□□□□□ -0.15
SHC1-210ENST00000448116 RBAK-RBAKDNI3L0D1 243 aa14.13□□□□□ -0.15
SHC1-210ENST00000448116 MYBP10242 640 aa14.13□□□□□ -0.15
SHC1-210ENST00000448116 NOVP48745 357 aa14.13□□□□□ -0.15
SHC1-210ENST00000448116 GJB7Q6PEY0 223 aa14.13□□□□□ -0.15
SHC1-210ENST00000448116 CATSPER3Q86XQ3 398 aa14.13□□□□□ -0.15
SHC1-210ENST00000448116 CERS5Q8N5B7 392 aa14.13□□□□□ -0.15
SHC1-210ENST00000448116 CAVIN3Q969G5 261 aa14.13□□□□□ -0.15
SHC1-210ENST00000448116 SH3GL2Q99962 352 aa14.13□□□□□ -0.15
SHC1-210ENST00000448116 RSPH10B2B2RC85 870 aa14.13□□□□□ -0.15
SHC1-210ENST00000448116 SHOX2O60902 331 aaPredicted RBP14.13□□□□□ -0.15
SHC1-210ENST00000448116 RSPH10BP0C881 870 aa14.13□□□□□ -0.15
SHC1-210ENST00000448116 XRCC5P13010 732 aaKnown RBP14.13□□□□□ -0.15
SHC1-210ENST00000448116 CEP85LQ5SZL2 805 aa14.13□□□□□ -0.15
SHC1-210ENST00000448116 PPP1R18Q6NYC8 613 aa14.13□□□□□ -0.15
SHC1-210ENST00000448116 ALKBH5Q6P6C2 394 aaKnown RBP14.13□□□□□ -0.15
SHC1-210ENST00000448116 GBP6Q6ZN66 633 aa14.13□□□□□ -0.15
SHC1-210ENST00000448116 PCDHA2Q9Y5H9 948 aa14.13□□□□□ -0.15
SHC1-210ENST00000448116 NAV1Q8NEY1 1877 aa14.13□□□□□ -0.15
SHC1-210ENST00000448116 UCHL3P15374 230 aa14.13□□□□□ -0.15
SHC1-210ENST00000448116 GUCY1A3Q02108 690 aa14.13□□□□□ -0.15
SHC1-210ENST00000448116 CDC37Q16543 378 aaPredicted RBP14.13□□□□□ -0.15
SHC1-210ENST00000448116 SLFN13Q68D06 897 aa14.13□□□□□ -0.15
SHC1-210ENST00000448116 GANQ9H2C0 597 aa14.13□□□□□ -0.15
SHC1-210ENST00000448116 GDF3Q9NR23 364 aa14.13□□□□□ -0.15
SHC1-210ENST00000448116 ZNF233A6NK53 670 aa14.12□□□□□ -0.15
SHC1-210ENST00000448116 GCNT3O95395 438 aa14.12□□□□□ -0.15
SHC1-210ENST00000448116 EEF2P13639 858 aaKnown RBP14.12□□□□□ -0.15
SHC1-210ENST00000448116 ZNF76P36508 570 aa14.12□□□□□ -0.15
SHC1-210ENST00000448116 CASP4P49662 377 aa14.12□□□□□ -0.15
SHC1-210ENST00000448116 ARHGAP4P98171 946 aa14.12□□□□□ -0.15
SHC1-210ENST00000448116 INPP4AQ96PE3 977 aaPredicted RBP14.12□□□□□ -0.15
SHC1-210ENST00000448116 REEP2Q9BRK0 252 aa14.12□□□□□ -0.15
SHC1-210ENST00000448116 IKZF4Q9H2S9 585 aa14.12□□□□□ -0.15
SHC1-210ENST00000448116 AIPL1Q9NZN9 384 aa14.12□□□□□ -0.15
SHC1-210ENST00000448116 IGKV6D-41A0A0C4DH26 115 aa14.12□□□□□ -0.15
SHC1-210ENST00000448116 AFPP02771 609 aaKnown RBP14.12□□□□□ -0.15
SHC1-210ENST00000448116 CDC42EP5Q6NZY7 148 aa14.12□□□□□ -0.15
SHC1-210ENST00000448116 USP38Q8NB14 1042 aa14.12□□□□□ -0.15
SHC1-210ENST00000448116 RUBCNQ92622 972 aa14.12□□□□□ -0.15
SHC1-210ENST00000448116 RNPC3Q96LT9 517 aaKnown RBP14.12□□□□□ -0.15
SHC1-210ENST00000448116 BHMT2Q9H2M3 363 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms