RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 RALGAPA2Q2PPJ7 1873 aa8.25□□□□□ -1.09
LRRC28-203ENST00000447360 TTC41PQ6P2S7 1318 aa8.25□□□□□ -1.09
LRRC28-203ENST00000447360 CCDC171Q6TFL3 1326 aa8.25□□□□□ -1.09
LRRC28-203ENST00000447360 NRCAMQ92823 1304 aa8.25□□□□□ -1.09
LRRC28-203ENST00000447360 TPRP12270 2363 aaKnown RBP8.24□□□□□ -1.09
LRRC28-203ENST00000447360 NOP56O00567 594 aaKnown RBP8.24□□□□□ -1.09
LRRC28-203ENST00000447360 CFBP00751 764 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 GOLGA8HP0CJ92 632 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 SRGAP2BP0DMP2 458 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 MYCLP12524 364 aaPredicted RBP8.24□□□□□ -1.09
LRRC28-203ENST00000447360 NT5C2P49902 561 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 CLCN5P51795 746 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 ARHGAP4P98171 946 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 MGAT3Q09327 533 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 MTMR3Q13615 1198 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 LPIN1Q14693 890 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 QRICH1Q2TAL8 776 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 ASTLQ6HA08 431 aaPredicted RBP8.24□□□□□ -1.09
LRRC28-203ENST00000447360 PDE12Q6L8Q7 609 aaKnown RBP8.24□□□□□ -1.09
LRRC28-203ENST00000447360 METTL7BQ6UX53 244 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 FRMD5Q7Z6J6 570 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 RSPH3Q86UC2 560 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 DGKHQ86XP1 1220 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 NPAS4Q8IUM7 802 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 TMEM105Q8N8V8 129 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 KREMEN2Q8NCW0 462 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 LMBR1Q8WVP7 490 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 FTHL17Q9BXU8 183 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 S1PR5Q9H228 398 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 CPVLQ9H3G5 476 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 SORCS3Q9UPU3 1222 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 NR2E1Q9Y466 385 aa8.24□□□□□ -1.09
LRRC28-203ENST00000447360 PLXNA3P51805 1871 aa8.23□□□□□ -1.09
LRRC28-203ENST00000447360 OPLAHO14841 1288 aa8.23□□□□□ -1.09
LRRC28-203ENST00000447360 SORBS3O60504 671 aa8.23□□□□□ -1.09
LRRC28-203ENST00000447360 FGAP02671 866 aa8.23□□□□□ -1.09
LRRC28-203ENST00000447360 RPLP2P05387 115 aaKnown RBP8.23□□□□□ -1.09
LRRC28-203ENST00000447360 STAG3L1P0CL83 205 aa8.23□□□□□ -1.09
LRRC28-203ENST00000447360 HOXB8P17481 243 aaPredicted RBP8.23□□□□□ -1.09
LRRC28-203ENST00000447360 CCND2P30279 289 aa8.23□□□□□ -1.09
LRRC28-203ENST00000447360 KCNC3Q14003 757 aa8.23□□□□□ -1.09
LRRC28-203ENST00000447360 NEDD9Q14511 834 aa8.23□□□□□ -1.09
LRRC28-203ENST00000447360 PGM5Q15124 567 aa8.23□□□□□ -1.09
LRRC28-203ENST00000447360 DUSP6Q16828 381 aa8.23□□□□□ -1.09
LRRC28-203ENST00000447360 ASPRV1Q53RT3 343 aa8.23□□□□□ -1.09
LRRC28-203ENST00000447360 FBXO47Q5MNV8 452 aa8.23□□□□□ -1.09
LRRC28-203ENST00000447360 VPS53Q5VIR6 699 aa8.23□□□□□ -1.09
LRRC28-203ENST00000447360 TSHZ1Q6ZSZ6 1077 aa8.23□□□□□ -1.09
LRRC28-203ENST00000447360 FAM43BQ6ZT52 329 aaPredicted RBP8.23□□□□□ -1.09
LRRC28-203ENST00000447360 ZNF579Q8NAF0 562 aaKnown RBP8.23□□□□□ -1.09
LRRC28-203ENST00000447360 VN1R2Q8NFZ6 395 aa8.23□□□□□ -1.09
LRRC28-203ENST00000447360 PI4K2BQ8TCG2 481 aa8.23□□□□□ -1.09
LRRC28-203ENST00000447360 RASGRP4Q8TDF6 673 aa8.23□□□□□ -1.09
LRRC28-203ENST00000447360 MICAL1Q8TDZ2 1067 aa8.23□□□□□ -1.09
LRRC28-203ENST00000447360 GPR20Q99678 358 aa8.23□□□□□ -1.09
LRRC28-203ENST00000447360 AMNQ9BXJ7 453 aa8.23□□□□□ -1.09
LRRC28-203ENST00000447360 SQORQ9Y6N5 450 aa8.23□□□□□ -1.09
LRRC28-203ENST00000447360 NLRC5Q86WI3 1866 aa8.22□□□□□ -1.09
LRRC28-203ENST00000447360 KMT2BQ9UMN6 2715 aaPredicted RBP8.22□□□□□ -1.09
LRRC28-203ENST00000447360 MED19A0JLT2 244 aaPredicted RBP8.22□□□□□ -1.09
LRRC28-203ENST00000447360 PER2O15055 1255 aa8.22□□□□□ -1.09
LRRC28-203ENST00000447360 STAM2O75886 525 aa8.22□□□□□ -1.09
LRRC28-203ENST00000447360 BRD1O95696 1058 aa8.22□□□□□ -1.09
LRRC28-203ENST00000447360 PSEN1P49768 467 aa8.22□□□□□ -1.09
LRRC28-203ENST00000447360 GNPTABQ3T906 1256 aa8.22□□□□□ -1.09
LRRC28-203ENST00000447360 CCDC178Q5BJE1 867 aa8.22□□□□□ -1.09
LRRC28-203ENST00000447360 ANKRD54Q6NXT1 300 aa8.22□□□□□ -1.09
LRRC28-203ENST00000447360 MFSD6Q6ZSS7 791 aa8.22□□□□□ -1.09
LRRC28-203ENST00000447360 DGLUCYQ7Z3D6 616 aa8.22□□□□□ -1.09
LRRC28-203ENST00000447360 PNMA1Q8ND90 353 aa8.22□□□□□ -1.09
LRRC28-203ENST00000447360 LINC01599Q8WXQ3 324 aa8.22□□□□□ -1.09
LRRC28-203ENST00000447360 ESR2Q92731 530 aa8.22□□□□□ -1.09
LRRC28-203ENST00000447360 SEMA4AQ9H3S1 761 aa8.22□□□□□ -1.09
LRRC28-203ENST00000447360 DCTPP1Q9H773 170 aa8.22□□□□□ -1.09
LRRC28-203ENST00000447360 JMJD4Q9H9V9 463 aa8.22□□□□□ -1.09
LRRC28-203ENST00000447360 AAASQ9NRG9 546 aa8.22□□□□□ -1.09
LRRC28-203ENST00000447360 PCDHB12Q9Y5F1 795 aa8.22□□□□□ -1.09
LRRC28-203ENST00000447360 PCDHGC5Q9Y5F6 944 aa8.22□□□□□ -1.09
LRRC28-203ENST00000447360 ZMYM6O95789 1325 aa8.22□□□□□ -1.09
LRRC28-203ENST00000447360 ACACBO00763 2458 aa8.22□□□□□ -1.09
LRRC28-203ENST00000447360 CFAP47Q6ZTR5 3102 aa8.21□□□□□ -1.09
LRRC28-203ENST00000447360 TTC3P53804 2025 aa8.21□□□□□ -1.1
LRRC28-203ENST00000447360 MBLAC1A4D2B0 266 aaPredicted RBP8.21□□□□□ -1.1
LRRC28-203ENST00000447360 SPATA31C2B4DYI2 1134 aa8.21□□□□□ -1.1
LRRC28-203ENST00000447360 PPFIA3O75145 1194 aa8.21□□□□□ -1.1
LRRC28-203ENST00000447360 TECP42680 631 aa8.21□□□□□ -1.1
LRRC28-203ENST00000447360 RBM10P98175 930 aaKnown RBP8.21□□□□□ -1.1
LRRC28-203ENST00000447360 PAN2Q504Q3 1202 aaKnown RBP8.21□□□□□ -1.1
LRRC28-203ENST00000447360 SYCE2Q6PIF2 218 aa8.21□□□□□ -1.1
LRRC28-203ENST00000447360 RUFY4Q6ZNE9 571 aa8.21□□□□□ -1.1
LRRC28-203ENST00000447360 CYFIP1Q7L576 1253 aa8.21□□□□□ -1.1
LRRC28-203ENST00000447360 RTN4RL1Q86UN2 441 aaPredicted RBP8.21□□□□□ -1.1
LRRC28-203ENST00000447360 IQCA1Q86XH1 822 aa8.21□□□□□ -1.1
LRRC28-203ENST00000447360 TRIM50Q86XT4 487 aa8.21□□□□□ -1.1
LRRC28-203ENST00000447360 IL31RAQ8NI17 732 aa8.21□□□□□ -1.1
LRRC28-203ENST00000447360 GPKOWQ92917 476 aaPredicted RBP eCLIP8.21□□□□□ -1.1
LRRC28-203ENST00000447360 RMDN1Q96DB5 314 aa8.21□□□□□ -1.1
LRRC28-203ENST00000447360 NECTIN4Q96NY8 510 aa8.21□□□□□ -1.1
LRRC28-203ENST00000447360 INPP4AQ96PE3 977 aaPredicted RBP8.21□□□□□ -1.1
LRRC28-203ENST00000447360 SENP7Q9BQF6 1050 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms