RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 POTEGQ6S5H5 508 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 POTEEQ6S8J3 1075 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 E7EVH7 732 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 WNT10BO00744 389 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 MARK3P27448 753 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 EPHB4P54760 987 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 RHBDL3P58872 404 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 NTRK3Q16288 839 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 TYW1BQ6NUM6 668 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 SH3GLB2Q9NR46 395 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 SEPT9Q9UHD8 586 aaPredicted RBP12.34□□□□□ -0.43
PTCH2-203ENST00000447098 PHRF1Q9P1Y6 1649 aaKnown RBP12.34□□□□□ -0.43
PTCH2-203ENST00000447098 STXBP3O00186 592 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 EIF3HO15372 352 aaKnown RBP eCLIP12.34□□□□□ -0.43
PTCH2-203ENST00000447098 DNM2P50570 870 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 GUCY2FP51841 1108 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 RNASE9P60153 205 aaKnown RBP12.34□□□□□ -0.43
PTCH2-203ENST00000447098 AGBL1Q96MI9 1066 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 FNBP1Q96RU3 617 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 NUP58Q9BVL2 599 aa12.34□□□□□ -0.43
PTCH2-203ENST00000447098 FHDC1Q9C0D6 1143 aaPredicted RBP12.34□□□□□ -0.43
PTCH2-203ENST00000447098 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.34□□□□□ -0.43
PTCH2-203ENST00000447098 LRRIQ4A6NIV6 560 aa12.33□□□□□ -0.44
PTCH2-203ENST00000447098 AARSP49588 968 aaKnown RBP eCLIP12.33□□□□□ -0.44
PTCH2-203ENST00000447098 TGFB2P61812 414 aa12.33□□□□□ -0.44
PTCH2-203ENST00000447098 IFT20Q8IY31 132 aa12.33□□□□□ -0.44
PTCH2-203ENST00000447098 MB21D1Q8N884 522 aa12.33□□□□□ -0.44
PTCH2-203ENST00000447098 AGBL3Q8NEM8 1001 aa12.33□□□□□ -0.44
PTCH2-203ENST00000447098 EHD4Q9H223 541 aa12.33□□□□□ -0.44
PTCH2-203ENST00000447098 NHEJ1Q9H9Q4 299 aaPredicted RBP12.33□□□□□ -0.44
PTCH2-203ENST00000447098 PPANQ9NQ55 473 aaKnown RBP12.33□□□□□ -0.44
PTCH2-203ENST00000447098 TRIM49BA6NDI0 452 aa12.33□□□□□ -0.44
PTCH2-203ENST00000447098 hCG_1984214I3L0E3 225 aa12.33□□□□□ -0.44
PTCH2-203ENST00000447098 LAD1O00515 517 aa12.33□□□□□ -0.44
PTCH2-203ENST00000447098 PLA2G4BP0C869 781 aa12.33□□□□□ -0.44
PTCH2-203ENST00000447098 SHMT1P34896 483 aa12.33□□□□□ -0.44
PTCH2-203ENST00000447098 NNTQ13423 1086 aa12.33□□□□□ -0.44
PTCH2-203ENST00000447098 ARHGAP44Q17R89 818 aa12.33□□□□□ -0.44
PTCH2-203ENST00000447098 SUGP1Q8IWZ8 645 aaKnown RBP12.33□□□□□ -0.44
PTCH2-203ENST00000447098 ZNF713Q8N859 430 aaPredicted RBP12.33□□□□□ -0.44
PTCH2-203ENST00000447098 NYAP2Q9P242 653 aa12.33□□□□□ -0.44
PTCH2-203ENST00000447098 LIMA1Q9UHB6 759 aaKnown RBP12.33□□□□□ -0.44
PTCH2-203ENST00000447098 PPP1R3GB7ZBB8 358 aa12.33□□□□□ -0.44
PTCH2-203ENST00000447098 GJC1P36383 396 aa12.33□□□□□ -0.44
PTCH2-203ENST00000447098 IFT88Q13099 833 aa12.33□□□□□ -0.44
PTCH2-203ENST00000447098 FAM47CQ5HY64 1035 aa12.33□□□□□ -0.44
PTCH2-203ENST00000447098 ZNF658Q5TYW1 1059 aaPredicted RBP12.33□□□□□ -0.44
PTCH2-203ENST00000447098 CDKAL1Q5VV42 579 aa12.33□□□□□ -0.44
PTCH2-203ENST00000447098 SLC30A10Q6XR72 485 aa12.33□□□□□ -0.44
PTCH2-203ENST00000447098 TBC1D5Q92609 795 aa12.33□□□□□ -0.44
PTCH2-203ENST00000447098 ZNF668Q96K58 619 aaPredicted RBP12.33□□□□□ -0.44
PTCH2-203ENST00000447098 VCPKMTQ9H867 229 aa12.33□□□□□ -0.44
PTCH2-203ENST00000447098 FAM217BQ9NTX9 383 aaPredicted RBP12.33□□□□□ -0.44
PTCH2-203ENST00000447098 AFDNP55196 1824 aaKnown RBP12.32□□□□□ -0.44
PTCH2-203ENST00000447098 TMEM110-MUSTN1A8MSY1 372 aa12.32□□□□□ -0.44
PTCH2-203ENST00000447098 POTEJP0CG39 1038 aa12.32□□□□□ -0.44
PTCH2-203ENST00000447098 LMNB1P20700 586 aa12.32□□□□□ -0.44
PTCH2-203ENST00000447098 DPYDQ12882 1025 aa12.32□□□□□ -0.44
PTCH2-203ENST00000447098 SPATS2Q86XZ4 545 aaKnown RBP12.32□□□□□ -0.44
PTCH2-203ENST00000447098 ANKRD13CQ8N6S4 541 aa12.32□□□□□ -0.44
PTCH2-203ENST00000447098 AK8Q96MA6 479 aa12.32□□□□□ -0.44
PTCH2-203ENST00000447098 RGL1Q9NZL6 768 aa12.32□□□□□ -0.44
PTCH2-203ENST00000447098 EZRP15311 586 aaKnown RBP12.32□□□□□ -0.44
PTCH2-203ENST00000447098 CEP85LQ5SZL2 805 aa12.32□□□□□ -0.44
PTCH2-203ENST00000447098 ARL6IP4Q66PJ3 421 aaKnown RBP12.32□□□□□ -0.44
PTCH2-203ENST00000447098 RRAGAQ7L523 313 aa12.32□□□□□ -0.44
PTCH2-203ENST00000447098 LARSQ9P2J5 1176 aaKnown RBP12.32□□□□□ -0.44
PTCH2-203ENST00000447098 FEM1BQ9UK73 627 aa12.32□□□□□ -0.44
PTCH2-203ENST00000447098 HYOU1Q9Y4L1 999 aa12.32□□□□□ -0.44
PTCH2-203ENST00000447098 STRN3Q13033 797 aa12.32□□□□□ -0.44
PTCH2-203ENST00000447098 ADAM9Q13443 819 aa12.32□□□□□ -0.44
PTCH2-203ENST00000447098 PTPROQ16827 1216 aa12.32□□□□□ -0.44
PTCH2-203ENST00000447098 Q3C1V9 767 aa12.32□□□□□ -0.44
PTCH2-203ENST00000447098 MTERF2Q49AM1 385 aa12.32□□□□□ -0.44
PTCH2-203ENST00000447098 EARS2Q5JPH6 523 aaKnown RBP12.32□□□□□ -0.44
PTCH2-203ENST00000447098 ARFGAP2Q8N6H7 521 aa12.32□□□□□ -0.44
PTCH2-203ENST00000447098 LRRC1Q9BTT6 524 aa12.32□□□□□ -0.44
PTCH2-203ENST00000447098 IMPG2Q9BZV3 1241 aa12.32□□□□□ -0.44
PTCH2-203ENST00000447098 RGL2O15211 777 aa12.31□□□□□ -0.44
PTCH2-203ENST00000447098 TCP1P17987 556 aaKnown RBP12.31□□□□□ -0.44
PTCH2-203ENST00000447098 MAGEA1P43355 309 aa12.31□□□□□ -0.44
PTCH2-203ENST00000447098 HDLBPQ00341 1268 aaKnown RBP12.31□□□□□ -0.44
PTCH2-203ENST00000447098 PAK2Q13177 524 aa12.31□□□□□ -0.44
PTCH2-203ENST00000447098 CEP170P1Q96L14 293 aa12.31□□□□□ -0.44
PTCH2-203ENST00000447098 TUBGCP2Q9BSJ2 902 aa12.31□□□□□ -0.44
PTCH2-203ENST00000447098 PCIF1Q9H4Z3 704 aa12.31□□□□□ -0.44
PTCH2-203ENST00000447098 PRM3Q9NNZ6 103 aa12.31□□□□□ -0.44
PTCH2-203ENST00000447098 NOD1Q9Y239 953 aa12.31□□□□□ -0.44
PTCH2-203ENST00000447098 COL4A3BPQ9Y5P4 624 aa12.31□□□□□ -0.44
PTCH2-203ENST00000447098 FOXP2O15409 715 aa12.31□□□□□ -0.44
PTCH2-203ENST00000447098 CALUO43852 315 aaPredicted RBP12.31□□□□□ -0.44
PTCH2-203ENST00000447098 KRT5P13647 590 aa12.31□□□□□ -0.44
PTCH2-203ENST00000447098 POLGP54098 1239 aaPredicted RBP12.31□□□□□ -0.44
PTCH2-203ENST00000447098 SH2D3CQ8N5H7 860 aa12.31□□□□□ -0.44
PTCH2-203ENST00000447098 CTNNBL1Q8WYA6 563 aaPredicted RBP12.31□□□□□ -0.44
PTCH2-203ENST00000447098 DDX12PQ92771 950 aa12.31□□□□□ -0.44
PTCH2-203ENST00000447098 ATG4CQ96DT6 458 aa12.31□□□□□ -0.44
PTCH2-203ENST00000447098 PRPF6O94906 941 aaKnown RBP12.31□□□□□ -0.44
PTCH2-203ENST00000447098 DLATP10515 647 aaKnown RBP12.31□□□□□ -0.44
PTCH2-203ENST00000447098 GBP2P32456 591 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms