RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 FAM160B1Q5W0V3 765 aa19.52■□□□□ 0.71
SGCE-206ENST00000445866 MRPS27Q92552 414 aaKnown RBP19.52■□□□□ 0.71
SGCE-206ENST00000445866 ZNF333Q96JL9 665 aa19.52■□□□□ 0.71
SGCE-206ENST00000445866 DEFB118Q96PH6 123 aa19.52■□□□□ 0.71
SGCE-206ENST00000445866 UPF3AQ9H1J1 476 aaKnown RBP19.52■□□□□ 0.71
SGCE-206ENST00000445866 ZSWIM4Q9H7M6 989 aa19.52■□□□□ 0.71
SGCE-206ENST00000445866 TUFT1Q9NNX1 390 aa19.52■□□□□ 0.71
SGCE-206ENST00000445866 ZNF302Q9NR11 478 aa19.52■□□□□ 0.71
SGCE-206ENST00000445866 KCNH3Q9ULD8 1083 aa19.52■□□□□ 0.71
SGCE-206ENST00000445866 HTTP42858 3142 aa19.52■□□□□ 0.71
SGCE-206ENST00000445866 SYNRGQ9UMZ2 1314 aa19.51■□□□□ 0.71
SGCE-206ENST00000445866 A0A087WWV3 80 aa19.51■□□□□ 0.71
SGCE-206ENST00000445866 ZEB2O60315 1214 aa19.51■□□□□ 0.71
SGCE-206ENST00000445866 MMP3P08254 477 aa19.51■□□□□ 0.71
SGCE-206ENST00000445866 PSMC5P62195 406 aa19.51■□□□□ 0.71
SGCE-206ENST00000445866 ECM1Q16610 540 aa19.51■□□□□ 0.71
SGCE-206ENST00000445866 PDXDC2PQ6P474 469 aa19.51■□□□□ 0.71
SGCE-206ENST00000445866 TRMT1LQ7Z2T5 733 aaKnown RBP19.51■□□□□ 0.71
SGCE-206ENST00000445866 RNF180Q86T96 592 aa19.51■□□□□ 0.71
SGCE-206ENST00000445866 CCDC60Q8IWA6 550 aaPredicted RBP19.51■□□□□ 0.71
SGCE-206ENST00000445866 PDILTQ8N807 584 aa19.51■□□□□ 0.71
SGCE-206ENST00000445866 NEK9Q8TD19 979 aa19.51■□□□□ 0.71
SGCE-206ENST00000445866 PCYT2Q99447 389 aa19.51■□□□□ 0.71
SGCE-206ENST00000445866 SMARCAD1Q9H4L7 1026 aa19.51■□□□□ 0.71
SGCE-206ENST00000445866 PAK6Q9NQU5 681 aaPredicted RBP19.51■□□□□ 0.71
SGCE-206ENST00000445866 KIAA1024Q9UPX6 916 aa19.51■□□□□ 0.71
SGCE-206ENST00000445866 IGKV6D-21A0A0A0MT36 114 aa19.5■□□□□ 0.71
SGCE-206ENST00000445866 CTAGE5O15320 804 aa19.5■□□□□ 0.71
SGCE-206ENST00000445866 MYL3P08590 195 aa19.5■□□□□ 0.71
SGCE-206ENST00000445866 PFKFB1P16118 471 aa19.5■□□□□ 0.71
SGCE-206ENST00000445866 NDUFA8P51970 172 aa19.5■□□□□ 0.71
SGCE-206ENST00000445866 RRAGBQ5VZM2 374 aa19.5■□□□□ 0.71
SGCE-206ENST00000445866 CKAP2LQ8IYA6 745 aa19.5■□□□□ 0.71
SGCE-206ENST00000445866 ATP6V0A1Q93050 837 aa19.5■□□□□ 0.71
SGCE-206ENST00000445866 LXNQ9BS40 222 aa19.5■□□□□ 0.71
SGCE-206ENST00000445866 LCTP09848 1927 aa19.5■□□□□ 0.71
SGCE-206ENST00000445866 ZNFX1Q9P2E3 1918 aaKnown RBP19.5■□□□□ 0.71
SGCE-206ENST00000445866 POTEB3A0JP26 581 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 MYADML2A6NDP7 307 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 POLR2DO15514 142 aaKnown RBP19.49■□□□□ 0.71
SGCE-206ENST00000445866 SLC26A4O43511 780 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 KPNA6O60684 536 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 DKC1O60832 514 aaKnown RBP eCLIP19.49■□□□□ 0.71
SGCE-206ENST00000445866 ADAMTS4O75173 837 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 LGR5O75473 907 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 GRB10Q13322 594 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 POTEBQ6S5H4 581 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 CCDC73Q6ZRK6 1079 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 PLPPR4Q7Z2D5 763 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 ARRDC4Q8NCT1 418 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 GOLPH3LQ9H4A5 285 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 DDX19AQ9NUU7 478 aaKnown RBP19.49■□□□□ 0.71
SGCE-206ENST00000445866 DNM3Q9UQ16 869 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 MAFBQ9Y5Q3 323 aaPredicted RBP19.49■□□□□ 0.71
SGCE-206ENST00000445866 RBBP6Q7Z6E9 1792 aaKnown RBP19.49■□□□□ 0.71
SGCE-206ENST00000445866 DDX11L8A8MPP1 907 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 LGALS2P05162 132 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 HOXD8P13378 290 aaPredicted RBP19.49■□□□□ 0.71
SGCE-206ENST00000445866 NKX3-2P78367 333 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 KCNA10Q16322 511 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 UGCGQ16739 394 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 TRIM50Q86XT4 487 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 KLHDC9Q8NEP7 349 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 PNMA5Q96PV4 448 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 NACC1Q96RE7 527 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 NT5C3AQ9H0P0 336 aa19.49■□□□□ 0.71
SGCE-206ENST00000445866 WRAP73Q9P2S5 460 aaPredicted RBP19.49■□□□□ 0.71
SGCE-206ENST00000445866 MYH7BA7E2Y1 1941 aa19.48■□□□□ 0.71
SGCE-206ENST00000445866 ZBTB39O15060 712 aa19.48■□□□□ 0.71
SGCE-206ENST00000445866 TFRCP02786 760 aaKnown RBP19.48■□□□□ 0.71
SGCE-206ENST00000445866 ZNF286BP0CG31 522 aa19.48■□□□□ 0.71
SGCE-206ENST00000445866 PLCG1P19174 1290 aa19.48■□□□□ 0.71
SGCE-206ENST00000445866 MUTP22033 750 aa19.48■□□□□ 0.71
SGCE-206ENST00000445866 SYKP43405 635 aa19.48■□□□□ 0.71
SGCE-206ENST00000445866 CHMP4BP1P59074 171 aa19.48■□□□□ 0.71
SGCE-206ENST00000445866 LRRC41Q15345 812 aa19.48■□□□□ 0.71
SGCE-206ENST00000445866 HYIQ5T013 277 aa19.48■□□□□ 0.71
SGCE-206ENST00000445866 POTEGQ6S5H5 508 aa19.48■□□□□ 0.71
SGCE-206ENST00000445866 C4orf19Q8IY42 314 aa19.48■□□□□ 0.71
SGCE-206ENST00000445866 IQUBQ8NA54 791 aa19.48■□□□□ 0.71
SGCE-206ENST00000445866 AFAP1L1Q8TED9 768 aa19.48■□□□□ 0.71
SGCE-206ENST00000445866 PIGOQ8TEQ8 1089 aa19.48■□□□□ 0.71
SGCE-206ENST00000445866 C16orf70Q9BSU1 422 aa19.48■□□□□ 0.71
SGCE-206ENST00000445866 NRBP2Q9NSY0 501 aa19.48■□□□□ 0.71
SGCE-206ENST00000445866 HPSEQ9Y251 543 aa19.48■□□□□ 0.71
SGCE-206ENST00000445866 KDM3AQ9Y4C1 1321 aa19.48■□□□□ 0.71
SGCE-206ENST00000445866 A0A087X0B3 334 aa19.47■□□□□ 0.71
SGCE-206ENST00000445866 FAM237AA0A1B0GTK4 181 aa19.47■□□□□ 0.71
SGCE-206ENST00000445866 H3BRB1 525 aa19.47■□□□□ 0.71
SGCE-206ENST00000445866 ZNF862O60290 1169 aa19.47■□□□□ 0.71
SGCE-206ENST00000445866 LIG1P18858 919 aa19.47■□□□□ 0.71
SGCE-206ENST00000445866 MARK3P27448 753 aa19.47■□□□□ 0.71
SGCE-206ENST00000445866 PSMC6P62333 389 aa19.47■□□□□ 0.71
SGCE-206ENST00000445866 PCSK9Q8NBP7 692 aaKnown RBP19.47■□□□□ 0.71
SGCE-206ENST00000445866 DHX58Q96C10 678 aa19.47■□□□□ 0.71
SGCE-206ENST00000445866 TUT1Q9H6E5 874 aaKnown RBP19.47■□□□□ 0.71
SGCE-206ENST00000445866 ERAP1Q9NZ08 941 aa19.47■□□□□ 0.71
SGCE-206ENST00000445866 CASP8AP2Q9UKL3 1982 aa19.47■□□□□ 0.71
SGCE-206ENST00000445866 CENPFP49454 3210 aa19.47■□□□□ 0.71
SGCE-206ENST00000445866 ZNF202O95125 648 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms