RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 GABBR1Q9UBS5 961 aa15.86■□□□□ 0.13
SSBP3-208ENST00000444533 MTMR6Q9Y217 621 aa15.86■□□□□ 0.13
SSBP3-208ENST00000444533 NRCAMQ92823 1304 aa15.86■□□□□ 0.13
SSBP3-208ENST00000444533 DOCK5Q9H7D0 1870 aa15.85■□□□□ 0.13
SSBP3-208ENST00000444533 POTEB3A0JP26 581 aa15.85■□□□□ 0.13
SSBP3-208ENST00000444533 RRN3P2A6NIE6 340 aa15.85■□□□□ 0.13
SSBP3-208ENST00000444533 HAS3O00219 553 aa15.85■□□□□ 0.13
SSBP3-208ENST00000444533 SMIM10L2AP0DMW4 78 aa15.85■□□□□ 0.13
SSBP3-208ENST00000444533 SMIM10L2BP0DMW5 78 aa15.85■□□□□ 0.13
SSBP3-208ENST00000444533 PPFIA1Q13136 1202 aa15.85■□□□□ 0.13
SSBP3-208ENST00000444533 PTGDRQ13258 359 aa15.85■□□□□ 0.13
SSBP3-208ENST00000444533 PTGISQ16647 500 aa15.85■□□□□ 0.13
SSBP3-208ENST00000444533 POTEBQ6S5H4 581 aa15.85■□□□□ 0.13
SSBP3-208ENST00000444533 DTHD1Q6ZMT9 781 aa15.85■□□□□ 0.13
SSBP3-208ENST00000444533 NEK9Q8TD19 979 aa15.85■□□□□ 0.13
SSBP3-208ENST00000444533 HAS1Q92839 578 aa15.85■□□□□ 0.13
SSBP3-208ENST00000444533 GJA10Q969M2 543 aa15.85■□□□□ 0.13
SSBP3-208ENST00000444533 ZNF396Q96N95 335 aaPredicted RBP15.85■□□□□ 0.13
SSBP3-208ENST00000444533 LBHD1Q9BQE6 289 aaPredicted RBP15.85■□□□□ 0.13
SSBP3-208ENST00000444533 HDAC6Q9UBN7 1215 aa15.85■□□□□ 0.13
SSBP3-208ENST00000444533 GTF2IRD1Q9UHL9 959 aa15.85■□□□□ 0.13
SSBP3-208ENST00000444533 PCDHB6Q9Y5E3 794 aa15.85■□□□□ 0.13
SSBP3-208ENST00000444533 ATP6V1DQ9Y5K8 247 aa15.85■□□□□ 0.13
SSBP3-208ENST00000444533 IGKV6D-21A0A0A0MT36 114 aa15.84■□□□□ 0.13
SSBP3-208ENST00000444533 HBP1O60381 514 aa15.84■□□□□ 0.13
SSBP3-208ENST00000444533 P4HBP07237 508 aaKnown RBP15.84■□□□□ 0.13
SSBP3-208ENST00000444533 ZSCAN22P10073 491 aaPredicted RBP15.84■□□□□ 0.13
SSBP3-208ENST00000444533 PRPHP41219 470 aa15.84■□□□□ 0.13
SSBP3-208ENST00000444533 TECP42680 631 aa15.84■□□□□ 0.13
SSBP3-208ENST00000444533 TOB1P50616 345 aaPredicted RBP15.84■□□□□ 0.13
SSBP3-208ENST00000444533 PSMC5P62195 406 aa15.84■□□□□ 0.13
SSBP3-208ENST00000444533 NBR1Q14596 966 aa15.84■□□□□ 0.13
SSBP3-208ENST00000444533 EPHA7Q15375 998 aa15.84■□□□□ 0.13
SSBP3-208ENST00000444533 CCDC60Q8IWA6 550 aaPredicted RBP15.84■□□□□ 0.13
SSBP3-208ENST00000444533 FAM126BQ8IXS8 530 aa15.84■□□□□ 0.13
SSBP3-208ENST00000444533 BBXQ8WY36 941 aaPredicted RBP15.84■□□□□ 0.13
SSBP3-208ENST00000444533 CCDC43Q96MW1 224 aaKnown RBP15.84■□□□□ 0.13
SSBP3-208ENST00000444533 MTMR9Q96QG7 549 aa15.84■□□□□ 0.13
SSBP3-208ENST00000444533 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.84■□□□□ 0.13
SSBP3-208ENST00000444533 B4GALT4O60513 344 aa15.83■□□□□ 0.12
SSBP3-208ENST00000444533 RPLP2P05387 115 aaKnown RBP15.83■□□□□ 0.12
SSBP3-208ENST00000444533 RAG1P15918 1043 aa15.83■□□□□ 0.12
SSBP3-208ENST00000444533 QARSP47897 775 aaKnown RBP15.83■□□□□ 0.12
SSBP3-208ENST00000444533 RESTQ13127 1097 aa15.83■□□□□ 0.12
SSBP3-208ENST00000444533 BFSP2Q13515 415 aa15.83■□□□□ 0.12
SSBP3-208ENST00000444533 FOXD4L5Q5VV16 416 aaPredicted RBP15.83■□□□□ 0.12
SSBP3-208ENST00000444533 HAUS3Q68CZ6 603 aa15.83■□□□□ 0.12
SSBP3-208ENST00000444533 TRMT1LQ7Z2T5 733 aaKnown RBP15.83■□□□□ 0.12
SSBP3-208ENST00000444533 RSPH3Q86UC2 560 aa15.83■□□□□ 0.12
SSBP3-208ENST00000444533 RETREG2Q8NC44 543 aa15.83■□□□□ 0.12
SSBP3-208ENST00000444533 ATP8B4Q8TF62 1192 aa15.83■□□□□ 0.12
SSBP3-208ENST00000444533 FOXD4L4Q8WXT5 416 aaPredicted RBP15.83■□□□□ 0.12
SSBP3-208ENST00000444533 TRPV6Q9H1D0 765 aa15.83■□□□□ 0.12
SSBP3-208ENST00000444533 TMEM60Q9H2L4 133 aa15.83■□□□□ 0.12
SSBP3-208ENST00000444533 RNPEPQ9H4A4 650 aa15.83■□□□□ 0.12
SSBP3-208ENST00000444533 VAV3Q9UKW4 847 aa15.83■□□□□ 0.12
SSBP3-208ENST00000444533 TELO2Q9Y4R8 837 aa15.83■□□□□ 0.12
SSBP3-208ENST00000444533 MAFBQ9Y5Q3 323 aaPredicted RBP15.83■□□□□ 0.12
SSBP3-208ENST00000444533 GRIN2DO15399 1336 aa15.83■□□□□ 0.12
SSBP3-208ENST00000444533 SCN10AQ9Y5Y9 1956 aa15.82■□□□□ 0.12
SSBP3-208ENST00000444533 WNT7AO00755 349 aa15.82■□□□□ 0.12
SSBP3-208ENST00000444533 IGBP1P78318 339 aa15.82■□□□□ 0.12
SSBP3-208ENST00000444533 FAAP100Q0VG06 881 aa15.82■□□□□ 0.12
SSBP3-208ENST00000444533 PDIA5Q14554 519 aa15.82■□□□□ 0.12
SSBP3-208ENST00000444533 PLCB4Q15147 1175 aa15.82■□□□□ 0.12
SSBP3-208ENST00000444533 GRIK4Q16099 956 aa15.82■□□□□ 0.12
SSBP3-208ENST00000444533 ZNF484Q5JVG2 852 aa15.82■□□□□ 0.12
SSBP3-208ENST00000444533 ARL6IP4Q66PJ3 421 aaKnown RBP15.82■□□□□ 0.12
SSBP3-208ENST00000444533 GDF6Q6KF10 455 aaPredicted RBP15.82■□□□□ 0.12
SSBP3-208ENST00000444533 OTUD6AQ7L8S5 288 aa15.82■□□□□ 0.12
SSBP3-208ENST00000444533 PCYT2Q99447 389 aa15.82■□□□□ 0.12
SSBP3-208ENST00000444533 HIPK3Q9H422 1215 aa15.82■□□□□ 0.12
SSBP3-208ENST00000444533 ZSWIM4Q9H7M6 989 aa15.82■□□□□ 0.12
SSBP3-208ENST00000444533 TRMT13Q9NUP7 481 aaKnown RBP15.82■□□□□ 0.12
SSBP3-208ENST00000444533 SETD4Q9NVD3 440 aa15.82■□□□□ 0.12
SSBP3-208ENST00000444533 F13A1P00488 732 aa15.81■□□□□ 0.12
SSBP3-208ENST00000444533 CD4P01730 458 aa15.81■□□□□ 0.12
SSBP3-208ENST00000444533 OATP04181 439 aa15.81■□□□□ 0.12
SSBP3-208ENST00000444533 COL1A2P08123 1366 aa15.81■□□□□ 0.12
SSBP3-208ENST00000444533 FXR2P51116 673 aaKnown RBP eCLIP15.81■□□□□ 0.12
SSBP3-208ENST00000444533 NUCB2P80303 420 aa15.81■□□□□ 0.12
SSBP3-208ENST00000444533 ATP2C1P98194 919 aaPredicted RBP15.81■□□□□ 0.12
SSBP3-208ENST00000444533 PRKCEQ02156 737 aa15.81■□□□□ 0.12
SSBP3-208ENST00000444533 PTK7Q13308 1070 aa15.81■□□□□ 0.12
SSBP3-208ENST00000444533 SF3A1Q15459 793 aaKnown RBP15.81■□□□□ 0.12
SSBP3-208ENST00000444533 XKR3Q5GH77 459 aa15.81■□□□□ 0.12
SSBP3-208ENST00000444533 KRT79Q5XKE5 535 aa15.81■□□□□ 0.12
SSBP3-208ENST00000444533 ATL3Q6DD88 541 aa15.81■□□□□ 0.12
SSBP3-208ENST00000444533 TAF2Q6P1X5 1199 aa15.81■□□□□ 0.12
SSBP3-208ENST00000444533 B3GNT9Q6UX72 402 aa15.81■□□□□ 0.12
SSBP3-208ENST00000444533 TPH2Q8IWU9 490 aa15.81■□□□□ 0.12
SSBP3-208ENST00000444533 EXOC8Q8IYI6 725 aa15.81■□□□□ 0.12
SSBP3-208ENST00000444533 BANK1Q8NDB2 785 aa15.81■□□□□ 0.12
SSBP3-208ENST00000444533 CAGE1Q8TC20 777 aa15.81■□□□□ 0.12
SSBP3-208ENST00000444533 EIF2AK1Q9BQI3 630 aaKnown RBP15.81■□□□□ 0.12
SSBP3-208ENST00000444533 PDLIM7Q9NR12 457 aa15.81■□□□□ 0.12
SSBP3-208ENST00000444533 LRWD1Q9UFC0 647 aa15.81■□□□□ 0.12
SSBP3-208ENST00000444533 TUBE1Q9UJT0 475 aa15.81■□□□□ 0.12
SSBP3-208ENST00000444533 ZMYND8Q9ULU4 1186 aaPredicted RBP15.81■□□□□ 0.12
SSBP3-208ENST00000444533 IGSF9BQ9UPX0 1349 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms