RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 GJA10Q969M2 543 aa19.71■□□□□ 0.75
SMARCAL1-209ENST00000444508 PRO3102Q9H379 93 aa19.71■□□□□ 0.75
SMARCAL1-209ENST00000444508 SETD4Q9NVD3 440 aa19.71■□□□□ 0.75
SMARCAL1-209ENST00000444508 TRPC6Q9Y210 931 aa19.71■□□□□ 0.75
SMARCAL1-209ENST00000444508 NRCAMQ92823 1304 aa19.71■□□□□ 0.75
SMARCAL1-209ENST00000444508 KAT6AQ92794 2004 aa19.7■□□□□ 0.74
SMARCAL1-209ENST00000444508 IGKV6D-21A0A0A0MT36 114 aa19.7■□□□□ 0.74
SMARCAL1-209ENST00000444508 A0A1W2PPC1 479 aa19.7■□□□□ 0.74
SMARCAL1-209ENST00000444508 PITPNM1O00562 1244 aa19.7■□□□□ 0.74
SMARCAL1-209ENST00000444508 TBX3O15119 743 aa19.7■□□□□ 0.74
SMARCAL1-209ENST00000444508 BAG4O95429 457 aaKnown RBP19.7■□□□□ 0.74
SMARCAL1-209ENST00000444508 ZNF200P98182 395 aaPredicted RBP19.7■□□□□ 0.74
SMARCAL1-209ENST00000444508 PTK7Q13308 1070 aa19.7■□□□□ 0.74
SMARCAL1-209ENST00000444508 PPIGQ13427 754 aaKnown RBP eCLIP19.7■□□□□ 0.74
SMARCAL1-209ENST00000444508 SWSAP1Q6NVH7 229 aa19.7■□□□□ 0.74
SMARCAL1-209ENST00000444508 PDXDC2PQ6P474 469 aa19.7■□□□□ 0.74
SMARCAL1-209ENST00000444508 POTEDQ86YR6 584 aa19.7■□□□□ 0.74
SMARCAL1-209ENST00000444508 CCDC60Q8IWA6 550 aaPredicted RBP19.7■□□□□ 0.74
SMARCAL1-209ENST00000444508 AFAP1L1Q8TED9 768 aa19.7■□□□□ 0.74
SMARCAL1-209ENST00000444508 SNX21Q969T3 373 aa19.7■□□□□ 0.74
SMARCAL1-209ENST00000444508 CTAGE1Q96RT6 745 aa19.7■□□□□ 0.74
SMARCAL1-209ENST00000444508 UNC45AQ9H3U1 944 aa19.7■□□□□ 0.74
SMARCAL1-209ENST00000444508 KCNMB3Q9NPA1 279 aa19.7■□□□□ 0.74
SMARCAL1-209ENST00000444508 DISC1Q9NRI5 854 aa19.7■□□□□ 0.74
SMARCAL1-209ENST00000444508 NOL7Q9UMY1 257 aaKnown RBP19.7■□□□□ 0.74
SMARCAL1-209ENST00000444508 UMODL1Q5DID0 1318 aa19.7■□□□□ 0.74
SMARCAL1-209ENST00000444508 TRIOBPQ9H2D6 2365 aa19.69■□□□□ 0.74
SMARCAL1-209ENST00000444508 ATP2B1P20020 1258 aa19.69■□□□□ 0.74
SMARCAL1-209ENST00000444508 HOXC8P31273 242 aa19.69■□□□□ 0.74
SMARCAL1-209ENST00000444508 CCL23P55773 120 aa19.69■□□□□ 0.74
SMARCAL1-209ENST00000444508 PLCB4Q15147 1175 aa19.69■□□□□ 0.74
SMARCAL1-209ENST00000444508 GRIK4Q16099 956 aa19.69■□□□□ 0.74
SMARCAL1-209ENST00000444508 MCTP1Q6DN14 999 aa19.69■□□□□ 0.74
SMARCAL1-209ENST00000444508 MIER3Q7Z3K6 550 aa19.69■□□□□ 0.74
SMARCAL1-209ENST00000444508 HSCBQ8IWL3 235 aa19.69■□□□□ 0.74
SMARCAL1-209ENST00000444508 SLFN12Q8IYM2 578 aa19.69■□□□□ 0.74
SMARCAL1-209ENST00000444508 RDM1Q8NG50 284 aa19.69■□□□□ 0.74
SMARCAL1-209ENST00000444508 LMBR1Q8WVP7 490 aa19.69■□□□□ 0.74
SMARCAL1-209ENST00000444508 RANBP2P49792 3224 aaKnown RBP19.69■□□□□ 0.74
SMARCAL1-209ENST00000444508 TRIP12Q14669 1992 aaPredicted RBP19.68■□□□□ 0.74
SMARCAL1-209ENST00000444508 POTEB3A0JP26 581 aa19.68■□□□□ 0.74
SMARCAL1-209ENST00000444508 TREHO43280 583 aa19.68■□□□□ 0.74
SMARCAL1-209ENST00000444508 NEMFO60524 1076 aa19.68■□□□□ 0.74
SMARCAL1-209ENST00000444508 CSF2RAP15509 400 aa19.68■□□□□ 0.74
SMARCAL1-209ENST00000444508 U2AF2P26368 475 aaKnown RBP eCLIP19.68■□□□□ 0.743e-6■■■□□ 17.1
SMARCAL1-209ENST00000444508 HIC1Q14526 733 aa19.68■□□□□ 0.74
SMARCAL1-209ENST00000444508 CALCRLQ16602 461 aa19.68■□□□□ 0.74
SMARCAL1-209ENST00000444508 LARP1BQ659C4 914 aaKnown RBP19.68■□□□□ 0.74
SMARCAL1-209ENST00000444508 POTEBQ6S5H4 581 aa19.68■□□□□ 0.74
SMARCAL1-209ENST00000444508 SERINC5Q86VE9 423 aa19.68■□□□□ 0.74
SMARCAL1-209ENST00000444508 CKAP2LQ8IYA6 745 aa19.68■□□□□ 0.74
SMARCAL1-209ENST00000444508 TDHQ8IZJ6 230 aa19.68■□□□□ 0.74
SMARCAL1-209ENST00000444508 WNT8AQ9H1J5 351 aa19.68■□□□□ 0.74
SMARCAL1-209ENST00000444508 GABBR1Q9UBS5 961 aa19.68■□□□□ 0.74
SMARCAL1-209ENST00000444508 MYH9P35579 1960 aaKnown RBP19.67■□□□□ 0.74
SMARCAL1-209ENST00000444508 RRN3P2A6NIE6 340 aa19.67■□□□□ 0.74
SMARCAL1-209ENST00000444508 KIF28PB7ZC32 967 aa19.67■□□□□ 0.74
SMARCAL1-209ENST00000444508 TRAPPC10P48553 1259 aa19.67■□□□□ 0.74
SMARCAL1-209ENST00000444508 ATP8B4Q8TF62 1192 aa19.67■□□□□ 0.74
SMARCAL1-209ENST00000444508 DHX38Q92620 1227 aaKnown RBP19.67■□□□□ 0.74
SMARCAL1-209ENST00000444508 INTS4Q96HW7 963 aaKnown RBP19.67■□□□□ 0.74
SMARCAL1-209ENST00000444508 MAFBQ9Y5Q3 323 aaPredicted RBP19.67■□□□□ 0.74
SMARCAL1-209ENST00000444508 HBP1O60381 514 aa19.66■□□□□ 0.74
SMARCAL1-209ENST00000444508 INSRRP14616 1297 aa19.66■□□□□ 0.74
SMARCAL1-209ENST00000444508 SELPP16109 830 aa19.66■□□□□ 0.74
SMARCAL1-209ENST00000444508 PDCP20941 246 aa19.66■□□□□ 0.74
SMARCAL1-209ENST00000444508 MCM7P33993 719 aa19.66■□□□□ 0.74
SMARCAL1-209ENST00000444508 IGBP1P78318 339 aa19.66■□□□□ 0.74
SMARCAL1-209ENST00000444508 RBL2Q08999 1139 aa19.66■□□□□ 0.74
SMARCAL1-209ENST00000444508 PPP2R5CQ13362 524 aa19.66■□□□□ 0.74
SMARCAL1-209ENST00000444508 ORC2Q13416 577 aaPredicted RBP19.66■□□□□ 0.74
SMARCAL1-209ENST00000444508 HABP4Q5JVS0 413 aaKnown RBP19.66■□□□□ 0.74
SMARCAL1-209ENST00000444508 RPUSD2Q8IZ73 545 aaKnown RBP19.66■□□□□ 0.74
SMARCAL1-209ENST00000444508 HAS1Q92839 578 aa19.66■□□□□ 0.74
SMARCAL1-209ENST00000444508 SCLYQ96I15 445 aa19.66■□□□□ 0.74
SMARCAL1-209ENST00000444508 FAM167AQ96KS9 214 aa19.66■□□□□ 0.74
SMARCAL1-209ENST00000444508 IL23AQ9NPF7 189 aa19.66■□□□□ 0.74
SMARCAL1-209ENST00000444508 TUBE1Q9UJT0 475 aa19.66■□□□□ 0.74
SMARCAL1-209ENST00000444508 VAV3Q9UKW4 847 aa19.66■□□□□ 0.74
SMARCAL1-209ENST00000444508 IGSF9BQ9UPX0 1349 aa19.66■□□□□ 0.74
SMARCAL1-209ENST00000444508 TANC1Q9C0D5 1861 aa19.65■□□□□ 0.74
SMARCAL1-209ENST00000444508 WNT7AO00755 349 aa19.65■□□□□ 0.74
SMARCAL1-209ENST00000444508 CKBP12277 381 aa19.65■□□□□ 0.74
SMARCAL1-209ENST00000444508 RFC2P35250 354 aa19.65■□□□□ 0.74
SMARCAL1-209ENST00000444508 THPOP40225 353 aa19.65■□□□□ 0.74
SMARCAL1-209ENST00000444508 ADAM17P78536 824 aa19.65■□□□□ 0.74
SMARCAL1-209ENST00000444508 TTC38Q5R3I4 469 aa19.65■□□□□ 0.74
SMARCAL1-209ENST00000444508 TAF2Q6P1X5 1199 aa19.65■□□□□ 0.74
SMARCAL1-209ENST00000444508 PSRC1Q6PGN9 363 aaPredicted RBP19.65■□□□□ 0.74
SMARCAL1-209ENST00000444508 B3GNT9Q6UX72 402 aa19.65■□□□□ 0.74
SMARCAL1-209ENST00000444508 LRRC8DQ7L1W4 858 aa19.65■□□□□ 0.74
SMARCAL1-209ENST00000444508 BBXQ8WY36 941 aaPredicted RBP19.65■□□□□ 0.74
SMARCAL1-209ENST00000444508 WDR81Q562E7 1941 aa19.64■□□□□ 0.74
SMARCAL1-209ENST00000444508 CAND2O75155 1236 aa19.64■□□□□ 0.73
SMARCAL1-209ENST00000444508 IQCF3P0C7M6 154 aa19.64■□□□□ 0.73
SMARCAL1-209ENST00000444508 EPHB4P54760 987 aa19.64■□□□□ 0.73
SMARCAL1-209ENST00000444508 ZNF174Q15697 407 aa19.64■□□□□ 0.73
SMARCAL1-209ENST00000444508 TRIM71Q2Q1W2 868 aaKnown RBP19.64■□□□□ 0.73
SMARCAL1-209ENST00000444508 ZNF484Q5JVG2 852 aa19.64■□□□□ 0.73
SMARCAL1-209ENST00000444508 WNT8BQ93098 351 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms