RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 RNPEPQ9H4A4 650 aa16.99■□□□□ 0.31
CSNK1E-210ENST00000442216 BAG4O95429 457 aaKnown RBP16.98■□□□□ 0.31
CSNK1E-210ENST00000442216 TRAPPC10P48553 1259 aa16.98■□□□□ 0.31
CSNK1E-210ENST00000442216 ADAM17P78536 824 aa16.98■□□□□ 0.31
CSNK1E-210ENST00000442216 PTK7Q13308 1070 aa16.98■□□□□ 0.31
CSNK1E-210ENST00000442216 SLFN12Q8IYM2 578 aa16.98■□□□□ 0.31
CSNK1E-210ENST00000442216 TMEM199Q8N511 208 aa16.98■□□□□ 0.31
CSNK1E-210ENST00000442216 PPP1R13LQ8WUF5 828 aa16.98■□□□□ 0.31
CSNK1E-210ENST00000442216 CTAGE1Q96RT6 745 aa16.98■□□□□ 0.31
CSNK1E-210ENST00000442216 ZNF302Q9NR11 478 aa16.98■□□□□ 0.31
CSNK1E-210ENST00000442216 DISC1Q9NRI5 854 aa16.98■□□□□ 0.31
CSNK1E-210ENST00000442216 COLQQ9Y215 455 aaPredicted RBP16.98■□□□□ 0.31
CSNK1E-210ENST00000442216 MAFBQ9Y5Q3 323 aaPredicted RBP16.98■□□□□ 0.31
CSNK1E-210ENST00000442216 RRN3P2A6NIE6 340 aa16.97■□□□□ 0.31
CSNK1E-210ENST00000442216 BACH1O14867 736 aa16.97■□□□□ 0.31
CSNK1E-210ENST00000442216 CYP2C9P11712 490 aa16.97■□□□□ 0.31
CSNK1E-210ENST00000442216 FPGSQ05932 587 aa16.97■□□□□ 0.31
CSNK1E-210ENST00000442216 PPP2R5CQ13362 524 aa16.97■□□□□ 0.31
CSNK1E-210ENST00000442216 SERINC5Q86VE9 423 aa16.97■□□□□ 0.31
CSNK1E-210ENST00000442216 CCDC60Q8IWA6 550 aaPredicted RBP16.97■□□□□ 0.31
CSNK1E-210ENST00000442216 ATP6V0A1Q93050 837 aa16.97■□□□□ 0.31
CSNK1E-210ENST00000442216 UIMC1Q96RL1 719 aa16.97■□□□□ 0.31
CSNK1E-210ENST00000442216 PPP1R12CQ9BZL4 782 aa16.97■□□□□ 0.31
CSNK1E-210ENST00000442216 UBE2OQ9C0C9 1292 aaKnown RBP16.97■□□□□ 0.31
CSNK1E-210ENST00000442216 NOL7Q9UMY1 257 aaKnown RBP16.97■□□□□ 0.31
CSNK1E-210ENST00000442216 SAMM50Q9Y512 469 aa16.97■□□□□ 0.31
CSNK1E-210ENST00000442216 SCN5AQ14524 2016 aa16.96■□□□□ 0.31
CSNK1E-210ENST00000442216 EVPLQ92817 2033 aa16.96■□□□□ 0.31
CSNK1E-210ENST00000442216 H3BQV1 296 aa16.96■□□□□ 0.31
CSNK1E-210ENST00000442216 HBP1O60381 514 aa16.96■□□□□ 0.31
CSNK1E-210ENST00000442216 PARNO95453 639 aaKnown RBP16.96■□□□□ 0.31
CSNK1E-210ENST00000442216 PDCP20941 246 aa16.96■□□□□ 0.31
CSNK1E-210ENST00000442216 CYP2C18P33260 490 aa16.96■□□□□ 0.31
CSNK1E-210ENST00000442216 PPFIA1Q13136 1202 aa16.96■□□□□ 0.31
CSNK1E-210ENST00000442216 PPIGQ13427 754 aaKnown RBP eCLIP16.96■□□□□ 0.313e-12■□□□□ 10.1
CSNK1E-210ENST00000442216 HIC1Q14526 733 aa16.96■□□□□ 0.31
CSNK1E-210ENST00000442216 PLCB4Q15147 1175 aa16.96■□□□□ 0.31
CSNK1E-210ENST00000442216 LARP1BQ659C4 914 aaKnown RBP16.96■□□□□ 0.31
CSNK1E-210ENST00000442216 SWSAP1Q6NVH7 229 aa16.96■□□□□ 0.31
CSNK1E-210ENST00000442216 POTEDQ86YR6 584 aa16.96■□□□□ 0.31
CSNK1E-210ENST00000442216 HSCBQ8IWL3 235 aa16.96■□□□□ 0.31
CSNK1E-210ENST00000442216 RETREG2Q8NC44 543 aa16.96■□□□□ 0.31
CSNK1E-210ENST00000442216 HAS1Q92839 578 aa16.96■□□□□ 0.31
CSNK1E-210ENST00000442216 UNC45AQ9H3U1 944 aa16.96■□□□□ 0.31
CSNK1E-210ENST00000442216 SETD4Q9NVD3 440 aa16.96■□□□□ 0.31
CSNK1E-210ENST00000442216 IGSF9BQ9UPX0 1349 aa16.96■□□□□ 0.3
CSNK1E-210ENST00000442216 COL1A2P08123 1366 aa16.95■□□□□ 0.3
CSNK1E-210ENST00000442216 POTEB3A0JP26 581 aa16.95■□□□□ 0.3
CSNK1E-210ENST00000442216 KIF28PB7ZC32 967 aa16.95■□□□□ 0.3
CSNK1E-210ENST00000442216 MARCH6O60337 910 aa16.95■□□□□ 0.3
CSNK1E-210ENST00000442216 NEMFO60524 1076 aa16.95■□□□□ 0.3
CSNK1E-210ENST00000442216 CAND2O75155 1236 aa16.95■□□□□ 0.3
CSNK1E-210ENST00000442216 RPLP2P05387 115 aaKnown RBP16.95■□□□□ 0.3
CSNK1E-210ENST00000442216 MARK3P27448 753 aa16.95■□□□□ 0.3
CSNK1E-210ENST00000442216 RFC2P35250 354 aa16.95■□□□□ 0.3
CSNK1E-210ENST00000442216 GRIK4Q16099 956 aa16.95■□□□□ 0.3
CSNK1E-210ENST00000442216 PDXDC2PQ6P474 469 aa16.95■□□□□ 0.3
CSNK1E-210ENST00000442216 POTEBQ6S5H4 581 aa16.95■□□□□ 0.3
CSNK1E-210ENST00000442216 MIER3Q7Z3K6 550 aa16.95■□□□□ 0.3
CSNK1E-210ENST00000442216 ATP8B4Q8TF62 1192 aa16.95■□□□□ 0.3
CSNK1E-210ENST00000442216 LMBR1Q8WVP7 490 aa16.95■□□□□ 0.3
CSNK1E-210ENST00000442216 BBXQ8WY36 941 aaPredicted RBP16.95■□□□□ 0.3
CSNK1E-210ENST00000442216 VAV3Q9UKW4 847 aa16.95■□□□□ 0.3
CSNK1E-210ENST00000442216 UMODL1Q5DID0 1318 aa16.95■□□□□ 0.3
CSNK1E-210ENST00000442216 MBLAC1A4D2B0 266 aaPredicted RBP16.94■□□□□ 0.3
CSNK1E-210ENST00000442216 TREHO43280 583 aa16.94■□□□□ 0.3
CSNK1E-210ENST00000442216 PFKMP08237 780 aa16.94■□□□□ 0.3
CSNK1E-210ENST00000442216 INSRRP14616 1297 aa16.94■□□□□ 0.3
CSNK1E-210ENST00000442216 ZNF200P98182 395 aaPredicted RBP16.94■□□□□ 0.3
CSNK1E-210ENST00000442216 CALCRLQ16602 461 aa16.94■□□□□ 0.3
CSNK1E-210ENST00000442216 TRIM71Q2Q1W2 868 aaKnown RBP16.94■□□□□ 0.3
CSNK1E-210ENST00000442216 TAF2Q6P1X5 1199 aa16.94■□□□□ 0.3
CSNK1E-210ENST00000442216 TDHQ8IZJ6 230 aa16.94■□□□□ 0.3
CSNK1E-210ENST00000442216 DHX38Q92620 1227 aaKnown RBP16.94■□□□□ 0.3
CSNK1E-210ENST00000442216 GJA10Q969M2 543 aa16.94■□□□□ 0.3
CSNK1E-210ENST00000442216 FAM167AQ96KS9 214 aa16.94■□□□□ 0.3
CSNK1E-210ENST00000442216 MTMR9Q96QG7 549 aa16.94■□□□□ 0.3
CSNK1E-210ENST00000442216 WNT8AQ9H1J5 351 aa16.94■□□□□ 0.3
CSNK1E-210ENST00000442216 GABBR1Q9UBS5 961 aa16.94■□□□□ 0.3
CSNK1E-210ENST00000442216 TRPC6Q9Y210 931 aa16.94■□□□□ 0.3
CSNK1E-210ENST00000442216 WNT7AO00755 349 aa16.93■□□□□ 0.3
CSNK1E-210ENST00000442216 CHMP2AO43633 222 aa16.93■□□□□ 0.3
CSNK1E-210ENST00000442216 IQCF3P0C7M6 154 aa16.93■□□□□ 0.3
CSNK1E-210ENST00000442216 CKBP12277 381 aa16.93■□□□□ 0.3
CSNK1E-210ENST00000442216 CSF2RAP15509 400 aa16.93■□□□□ 0.3
CSNK1E-210ENST00000442216 SELPP16109 830 aa16.93■□□□□ 0.3
CSNK1E-210ENST00000442216 ATP4AP20648 1035 aa16.93■□□□□ 0.3
CSNK1E-210ENST00000442216 ZNF484Q5JVG2 852 aa16.93■□□□□ 0.3
CSNK1E-210ENST00000442216 TTC38Q5R3I4 469 aa16.93■□□□□ 0.3
CSNK1E-210ENST00000442216 MCTP1Q6DN14 999 aa16.93■□□□□ 0.3
CSNK1E-210ENST00000442216 RPAINQ86UA6 219 aa16.93■□□□□ 0.3
CSNK1E-210ENST00000442216 RPUSD2Q8IZ73 545 aaKnown RBP16.93■□□□□ 0.3
CSNK1E-210ENST00000442216 IL23AQ9NPF7 189 aa16.93■□□□□ 0.3
CSNK1E-210ENST00000442216 TUBE1Q9UJT0 475 aa16.93■□□□□ 0.3
CSNK1E-210ENST00000442216 PCDHA12Q9UN75 941 aa16.93■□□□□ 0.3
CSNK1E-210ENST00000442216 DKC1O60832 514 aaKnown RBP eCLIP16.92■□□□□ 0.3
CSNK1E-210ENST00000442216 MCM7P33993 719 aa16.92■□□□□ 0.3
CSNK1E-210ENST00000442216 CCL23P55773 120 aa16.92■□□□□ 0.3
CSNK1E-210ENST00000442216 SPIRE1Q08AE8 756 aa16.92■□□□□ 0.3
CSNK1E-210ENST00000442216 EPHA7Q15375 998 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms