RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 FKBP9P1Q75LS8 142 aa6.86□□□□□ -1.31
PFDN4-202ENST00000441080 GPATCH3Q96I76 525 aa6.86□□□□□ -1.31
PFDN4-202ENST00000441080 SIGLEC10Q96LC7 697 aa6.86□□□□□ -1.31
PFDN4-202ENST00000441080 IFT22Q9H7X7 185 aa6.86□□□□□ -1.31
PFDN4-202ENST00000441080 PCDH18Q9HCL0 1135 aa6.86□□□□□ -1.31
PFDN4-202ENST00000441080 PCDH12Q9NPG4 1184 aa6.86□□□□□ -1.31
PFDN4-202ENST00000441080 ACSS2Q9NR19 701 aa6.86□□□□□ -1.31
PFDN4-202ENST00000441080 HSPBP1Q9NZL4 362 aa6.86□□□□□ -1.31
PFDN4-202ENST00000441080 TCAF2A6NFQ2 919 aa6.85□□□□□ -1.31
PFDN4-202ENST00000441080 FOXP2O15409 715 aa6.85□□□□□ -1.31
PFDN4-202ENST00000441080 MED14OSP0DP75 135 aa6.85□□□□□ -1.31
PFDN4-202ENST00000441080 SLC9A1P19634 815 aa6.85□□□□□ -1.31
PFDN4-202ENST00000441080 LSSP48449 732 aa6.85□□□□□ -1.31
PFDN4-202ENST00000441080 HERVK_113P62684 666 aa6.85□□□□□ -1.31
PFDN4-202ENST00000441080 AMPD3Q01432 767 aa6.85□□□□□ -1.31
PFDN4-202ENST00000441080 CD276Q5ZPR3 534 aa6.85□□□□□ -1.31
PFDN4-202ENST00000441080 VASNQ6EMK4 673 aa6.85□□□□□ -1.31
PFDN4-202ENST00000441080 TMC5Q6UXY8 1006 aa6.85□□□□□ -1.31
PFDN4-202ENST00000441080 ATG14Q6ZNE5 492 aa6.85□□□□□ -1.31
PFDN4-202ENST00000441080 C11orf74Q86VG3 221 aa6.85□□□□□ -1.31
PFDN4-202ENST00000441080 POU5F2Q8N7G0 328 aa6.85□□□□□ -1.31
PFDN4-202ENST00000441080 EFHBQ8N7U6 833 aa6.85□□□□□ -1.31
PFDN4-202ENST00000441080 ATL2Q8NHH9 583 aa6.85□□□□□ -1.31
PFDN4-202ENST00000441080 SPTLC3Q9NUV7 552 aa6.85□□□□□ -1.31
PFDN4-202ENST00000441080 RBPJLQ9UBG7 517 aa6.85□□□□□ -1.31
PFDN4-202ENST00000441080 MCM8Q9UJA3 840 aa6.85□□□□□ -1.31
PFDN4-202ENST00000441080 SPO11Q9Y5K1 396 aa6.85□□□□□ -1.31
PFDN4-202ENST00000441080 NEMP1O14524 444 aa6.84□□□□□ -1.31
PFDN4-202ENST00000441080 ZEB2O60315 1214 aa6.84□□□□□ -1.31
PFDN4-202ENST00000441080 BRINP1O60477 761 aa6.84□□□□□ -1.31
PFDN4-202ENST00000441080 MMEP08473 750 aa6.84□□□□□ -1.31
PFDN4-202ENST00000441080 POU3F3P20264 500 aaPredicted RBP6.84□□□□□ -1.31
PFDN4-202ENST00000441080 SDHAP31040 664 aa6.84□□□□□ -1.31
PFDN4-202ENST00000441080 DBPQ10586 325 aaPredicted RBP6.84□□□□□ -1.31
PFDN4-202ENST00000441080 CATSPEREQ5SY80 951 aa6.84□□□□□ -1.31
PFDN4-202ENST00000441080 PASD1Q8IV76 773 aa6.84□□□□□ -1.31
PFDN4-202ENST00000441080 FMNL2Q96PY5 1086 aa6.84□□□□□ -1.31
PFDN4-202ENST00000441080 ELF4Q99607 663 aaPredicted RBP6.84□□□□□ -1.31
PFDN4-202ENST00000441080 SYT3Q9BQG1 590 aa6.84□□□□□ -1.31
PFDN4-202ENST00000441080 GORASP1Q9BQQ3 440 aa6.84□□□□□ -1.31
PFDN4-202ENST00000441080 BRINP2Q9C0B6 783 aa6.84□□□□□ -1.31
PFDN4-202ENST00000441080 TOMM22Q9NS69 142 aa6.84□□□□□ -1.31
PFDN4-202ENST00000441080 ARHGAP28Q9P2N2 729 aa6.84□□□□□ -1.31
PFDN4-202ENST00000441080 APOBEC2Q9Y235 224 aaKnown RBP6.84□□□□□ -1.31
PFDN4-202ENST00000441080 ATP8A1Q9Y2Q0 1164 aa6.84□□□□□ -1.31
PFDN4-202ENST00000441080 RASSF10A6NK89 507 aa6.83□□□□□ -1.32
PFDN4-202ENST00000441080 EYA4O95677 639 aa6.83□□□□□ -1.32
PFDN4-202ENST00000441080 TSPAN15O95858 294 aa6.83□□□□□ -1.32
PFDN4-202ENST00000441080 CYP17A1P05093 508 aa6.83□□□□□ -1.32
PFDN4-202ENST00000441080 ENO2P09104 434 aaPredicted RBP6.83□□□□□ -1.32
PFDN4-202ENST00000441080 C1QTNF9P0C862 333 aa6.83□□□□□ -1.32
PFDN4-202ENST00000441080 AOAHP28039 575 aa6.83□□□□□ -1.32
PFDN4-202ENST00000441080 ID4P47928 161 aa6.83□□□□□ -1.32
PFDN4-202ENST00000441080 FNTBP49356 437 aa6.83□□□□□ -1.32
PFDN4-202ENST00000441080 STAT4Q14765 748 aa6.83□□□□□ -1.32
PFDN4-202ENST00000441080 ATP13A4Q4VNC1 1196 aa6.83□□□□□ -1.32
PFDN4-202ENST00000441080 LIPIQ6XZB0 460 aa6.83□□□□□ -1.32
PFDN4-202ENST00000441080 PROSER1Q86XN7 944 aa6.83□□□□□ -1.32
PFDN4-202ENST00000441080 DDX42Q86XP3 938 aaKnown RBP eCLIP6.83□□□□□ -1.32
PFDN4-202ENST00000441080 TMEFF1Q8IYR6 380 aa6.83□□□□□ -1.32
PFDN4-202ENST00000441080 HIPK4Q8NE63 616 aa6.83□□□□□ -1.32
PFDN4-202ENST00000441080 BHLHE22Q8NFJ8 381 aaPredicted RBP6.83□□□□□ -1.32
PFDN4-202ENST00000441080 ASB15Q8WXK1 588 aa6.83□□□□□ -1.32
PFDN4-202ENST00000441080 SCYL1Q96KG9 808 aa6.83□□□□□ -1.32
PFDN4-202ENST00000441080 GBP4Q96PP9 640 aa6.83□□□□□ -1.32
PFDN4-202ENST00000441080 TMEM209Q96SK2 561 aa6.83□□□□□ -1.32
PFDN4-202ENST00000441080 EMC7Q9NPA0 242 aa6.83□□□□□ -1.32
PFDN4-202ENST00000441080 CNOT6Q9ULM6 557 aaKnown RBP6.83□□□□□ -1.32
PFDN4-202ENST00000441080 PMF1-BGLAPU3KQ54 211 aa6.83□□□□□ -1.32
PFDN4-202ENST00000441080 hCG_2014768A0A024R1R8 64 aa6.82□□□□□ -1.32
PFDN4-202ENST00000441080 ZNF839A8K0R7 811 aa6.82□□□□□ -1.32
PFDN4-202ENST00000441080 KRT1P04264 644 aa6.82□□□□□ -1.32
PFDN4-202ENST00000441080 PI3P19957 117 aa6.82□□□□□ -1.32
PFDN4-202ENST00000441080 ITGA1P56199 1179 aa6.82□□□□□ -1.32
PFDN4-202ENST00000441080 PFKPQ01813 784 aa6.82□□□□□ -1.32
PFDN4-202ENST00000441080 SSPNQ14714 243 aa6.82□□□□□ -1.32
PFDN4-202ENST00000441080 PKN1Q16512 942 aa6.82□□□□□ -1.32
PFDN4-202ENST00000441080 STK32CQ86UX6 486 aa6.82□□□□□ -1.32
PFDN4-202ENST00000441080 FAM129CQ86XR2 697 aa6.82□□□□□ -1.32
PFDN4-202ENST00000441080 ERCC4Q92889 916 aaPredicted RBP6.82□□□□□ -1.32
PFDN4-202ENST00000441080 NOX5Q96PH1 765 aa6.82□□□□□ -1.32
PFDN4-202ENST00000441080 C11orf84Q9BUA3 381 aaPredicted RBP6.82□□□□□ -1.32
PFDN4-202ENST00000441080 SLC39A2Q9NP94 309 aa6.82□□□□□ -1.32
PFDN4-202ENST00000441080 CD320Q9NPF0 282 aa6.82□□□□□ -1.32
PFDN4-202ENST00000441080 DLL4Q9NR61 685 aa6.82□□□□□ -1.32
PFDN4-202ENST00000441080 SMG5Q9UPR3 1016 aaKnown RBP6.82□□□□□ -1.32
PFDN4-202ENST00000441080 WASF3Q9UPY6 502 aa6.82□□□□□ -1.32
PFDN4-202ENST00000441080 NOP58Q9Y2X3 529 aaKnown RBP6.82□□□□□ -1.32
PFDN4-202ENST00000441080 RFXAPO00287 272 aa6.81□□□□□ -1.32
PFDN4-202ENST00000441080 TGM5O43548 720 aa6.81□□□□□ -1.32
PFDN4-202ENST00000441080 PTGS1P23219 599 aa6.81□□□□□ -1.32
PFDN4-202ENST00000441080 PTX3P26022 381 aaPredicted RBP6.81□□□□□ -1.32
PFDN4-202ENST00000441080 MC4RP32245 332 aa6.81□□□□□ -1.32
PFDN4-202ENST00000441080 TMPRSS15P98073 1019 aa6.81□□□□□ -1.32
PFDN4-202ENST00000441080 SKIDA1Q1XH10 827 aa6.81□□□□□ -1.32
PFDN4-202ENST00000441080 CNKSR3Q6P9H4 555 aa6.81□□□□□ -1.32
PFDN4-202ENST00000441080 DTX3Q8N9I9 347 aa6.81□□□□□ -1.32
PFDN4-202ENST00000441080 KYQ8NBH2 561 aa6.81□□□□□ -1.32
PFDN4-202ENST00000441080 WDR66Q8TBY9 1149 aa6.81□□□□□ -1.32
PFDN4-202ENST00000441080 ZBTB8AQ96BR9 441 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms