RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 LAD1O00515 517 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 EPHB6O15197 1021 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 BUB1O43683 1085 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 GBP2P32456 591 aaPredicted RBP13.04□□□□□ -0.32
LTBR-203ENST00000441074 RHBDL3P58872 404 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 CUL1Q13616 776 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 TRADDQ15628 312 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 C11orf91Q3C1V1 193 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 VWA3BQ502W6 1294 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 GKAP1Q5VSY0 366 aaPredicted RBP13.04□□□□□ -0.32
LTBR-203ENST00000441074 USP17L1Q7RTZ2 530 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 CCDC84Q86UT8 332 aaPredicted RBP13.04□□□□□ -0.32
LTBR-203ENST00000441074 BLIDQ8IZY5 108 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 RAPGEF5Q92565 580 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 HVCN1Q96D96 273 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 EEF2KMTQ96G04 330 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 CCSER1Q9C0I3 900 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 COA1Q9GZY4 146 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 TMX4Q9H1E5 349 aaPredicted RBP13.04□□□□□ -0.32
LTBR-203ENST00000441074 ARPP21Q9UBL0 812 aaPredicted RBP13.04□□□□□ -0.32
LTBR-203ENST00000441074 BCS1LQ9Y276 419 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 DAGLAQ9Y4D2 1042 aa13.04□□□□□ -0.32
LTBR-203ENST00000441074 LRRC53A6NM62 1247 aa13.03□□□□□ -0.32
LTBR-203ENST00000441074 RBAK-RBAKDNI3L0D1 243 aa13.03□□□□□ -0.32
LTBR-203ENST00000441074 PPIP5K2O43314 1243 aa13.03□□□□□ -0.32
LTBR-203ENST00000441074 RAD51CO43502 376 aa13.03□□□□□ -0.32
LTBR-203ENST00000441074 BAG3O95817 575 aa13.03□□□□□ -0.32
LTBR-203ENST00000441074 ELF3P78545 371 aaPredicted RBP13.03□□□□□ -0.32
LTBR-203ENST00000441074 ZNF844Q08AG5 666 aa13.03□□□□□ -0.32
LTBR-203ENST00000441074 ZKSCAN8Q15776 578 aaPredicted RBP13.03□□□□□ -0.32
LTBR-203ENST00000441074 C12orf60Q5U649 245 aa13.03□□□□□ -0.32
LTBR-203ENST00000441074 GALNT17Q6IS24 598 aa13.03□□□□□ -0.32
LTBR-203ENST00000441074 DTHD1Q6ZMT9 781 aa13.03□□□□□ -0.32
LTBR-203ENST00000441074 RRAGAQ7L523 313 aa13.03□□□□□ -0.32
LTBR-203ENST00000441074 RSRC1Q96IZ7 334 aaKnown RBP13.03□□□□□ -0.32
LTBR-203ENST00000441074 INPP4AQ96PE3 977 aaPredicted RBP13.03□□□□□ -0.32
LTBR-203ENST00000441074 EDEM3Q9BZQ6 932 aa13.03□□□□□ -0.32
LTBR-203ENST00000441074 BATF3Q9NR55 127 aa13.03□□□□□ -0.32
LTBR-203ENST00000441074 FAM207AQ9NSI2 230 aaPredicted RBP13.03□□□□□ -0.32
LTBR-203ENST00000441074 PCDHA4Q9UN74 947 aa13.03□□□□□ -0.32
LTBR-203ENST00000441074 MAST2Q6P0Q8 1798 aa13.03□□□□□ -0.32
LTBR-203ENST00000441074 TSPY2A6NKD2 308 aa13.02□□□□□ -0.32
LTBR-203ENST00000441074 ATP6V1G2O95670 118 aa13.02□□□□□ -0.32
LTBR-203ENST00000441074 TMOD1P28289 359 aa13.02□□□□□ -0.32
LTBR-203ENST00000441074 UBA7P41226 1012 aa13.02□□□□□ -0.32
LTBR-203ENST00000441074 SLC1A4P43007 532 aa13.02□□□□□ -0.32
LTBR-203ENST00000441074 GFPT1Q06210 699 aaPredicted RBP13.02□□□□□ -0.32
LTBR-203ENST00000441074 NAA25Q14CX7 972 aa13.02□□□□□ -0.32
LTBR-203ENST00000441074 UAP1Q16222 522 aaPredicted RBP13.02□□□□□ -0.32
LTBR-203ENST00000441074 SBK1Q52WX2 424 aa13.02□□□□□ -0.32
LTBR-203ENST00000441074 COBLL1Q53SF7 1204 aa13.02□□□□□ -0.32
LTBR-203ENST00000441074 DALRD3Q5D0E6 543 aaKnown RBP13.02□□□□□ -0.32
LTBR-203ENST00000441074 BAP1Q92560 729 aa13.02□□□□□ -0.32
LTBR-203ENST00000441074 NDST4Q9H3R1 872 aa13.02□□□□□ -0.32
LTBR-203ENST00000441074 MMRN2Q9H8L6 949 aa13.02□□□□□ -0.32
LTBR-203ENST00000441074 NOD2Q9HC29 1040 aa13.02□□□□□ -0.32
LTBR-203ENST00000441074 TMEM59LQ9UK28 342 aa13.02□□□□□ -0.32
LTBR-203ENST00000441074 KIAA1551Q9HCM1 1747 aa13.02□□□□□ -0.33
LTBR-203ENST00000441074 GPR75-ASB3A0A0A6YYF3 556 aa13.02□□□□□ -0.33
LTBR-203ENST00000441074 OPLAHO14841 1288 aa13.02□□□□□ -0.33
LTBR-203ENST00000441074 PALMO75781 387 aa13.02□□□□□ -0.33
LTBR-203ENST00000441074 GNAQP50148 359 aa13.02□□□□□ -0.33
LTBR-203ENST00000441074 GSTO1P78417 241 aa13.02□□□□□ -0.33
LTBR-203ENST00000441074 TFAP4Q01664 338 aa13.02□□□□□ -0.33
LTBR-203ENST00000441074 PDE4DQ08499 809 aa13.02□□□□□ -0.33
LTBR-203ENST00000441074 ODF2Q5BJF6 829 aa13.02□□□□□ -0.33
LTBR-203ENST00000441074 MEI1Q5TIA1 1274 aa13.02□□□□□ -0.33
LTBR-203ENST00000441074 PDXDC1Q6P996 788 aa13.02□□□□□ -0.33
LTBR-203ENST00000441074 CRELD2Q6UXH1 353 aaPredicted RBP13.02□□□□□ -0.33
LTBR-203ENST00000441074 USP38Q8NB14 1042 aa13.02□□□□□ -0.33
LTBR-203ENST00000441074 DAGLBQ8NCG7 672 aa13.02□□□□□ -0.33
LTBR-203ENST00000441074 C7orf43Q8WVR3 580 aa13.02□□□□□ -0.33
LTBR-203ENST00000441074 CUL5Q93034 780 aa13.02□□□□□ -0.33
LTBR-203ENST00000441074 DDX4Q9NQI0 724 aaKnown RBP13.02□□□□□ -0.33
LTBR-203ENST00000441074 IL17RBQ9NRM6 502 aa13.02□□□□□ -0.33
LTBR-203ENST00000441074 CES2O00748 559 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 NKRFO15226 690 aaKnown RBP eCLIP13.01□□□□□ -0.33
LTBR-203ENST00000441074 ECM2O94769 699 aaPredicted RBP13.01□□□□□ -0.33
LTBR-203ENST00000441074 DRD4P21917 467 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 BRD2P25440 801 aaKnown RBP13.01□□□□□ -0.33
LTBR-203ENST00000441074 ECHS1P30084 290 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 CTNNA1P35221 906 aaKnown RBP13.01□□□□□ -0.33
LTBR-203ENST00000441074 PRPHP41219 470 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 ERVK-9P63128 1117 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 GRIK3Q13003 919 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 STK4Q13043 487 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 MTMR3Q13615 1198 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 HLTFQ14527 1009 aaKnown RBP eCLIP13.01□□□□□ -0.33
LTBR-203ENST00000441074 NAB2Q15742 525 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 ARHGAP27Q6ZUM4 889 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 TMC4Q7Z404 712 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 CPLX4Q7Z7G2 160 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 EBF2Q9HAK2 575 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 LUC7LQ9NQ29 371 aaKnown RBP13.01□□□□□ -0.33
LTBR-203ENST00000441074 CNOT8Q9UFF9 292 aaKnown RBP13.01□□□□□ -0.33
LTBR-203ENST00000441074 SWAP70Q9UH65 585 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 ABCB11O95342 1321 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 FLT1P17948 1338 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 CCDC194A0A1B0GVG4 234 aa13.01□□□□□ -0.33
LTBR-203ENST00000441074 CCT8L1PA6NM43 557 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms