RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 WASHC2AQ641Q2 1341 aa4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 MBD5Q9P267 1494 aa4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 ABCC2Q92887 1545 aa4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 ARHGEF5Q12774 1597 aa4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 CHD1O14646 1710 aa4.6□□□□□ -1.67
HMGB3P11-201ENST00000440127 TCRBV5S2A0A599 114 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 UHRF1BP1LA0JNW5 1464 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 KLF4O43474 513 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 TADA3O75528 432 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 CHGBP05060 677 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 GNAT1P11488 350 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 GRK2P25098 689 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 GRK3P35626 688 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 STAT5AP42229 794 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 GPR85P60893 370 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 CYP4F3Q08477 520 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 CDC42BPAQ5VT25 1732 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 EFCAB2Q5VUJ9 269 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 NSMFQ6X4W1 530 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 CCDC141Q6ZP82 1450 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 PLEKHH2Q8IVE3 1493 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 TEX14Q8IWB6 1497 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 IFNL3Q8IZI9 196 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 MICAL1Q8TDZ2 1067 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 TMEM168Q9H0V1 697 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 PIF1Q9H611 641 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 BARX1Q9HBU1 254 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 KIF15Q9NS87 1388 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 HSPBP1Q9NZL4 362 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 ASH2LQ9UBL3 628 aa4.59□□□□□ -1.67
HMGB3P11-201ENST00000440127 CROCC2H7BZ55 1655 aa4.58□□□□□ -1.68
HMGB3P11-201ENST00000440127 CCDC7Q96M83 1385 aa4.58□□□□□ -1.68
HMGB3P11-201ENST00000440127 ZNF536O15090 1300 aa4.58□□□□□ -1.68
HMGB3P11-201ENST00000440127 FAM47E-STBD1D6RA91 191 aa4.58□□□□□ -1.68
HMGB3P11-201ENST00000440127 AQP7O14520 342 aa4.58□□□□□ -1.68
HMGB3P11-201ENST00000440127 PRODHO43272 600 aa4.58□□□□□ -1.68
HMGB3P11-201ENST00000440127 FBXO21O94952 628 aa4.58□□□□□ -1.68
HMGB3P11-201ENST00000440127 PLATP00750 562 aa4.58□□□□□ -1.68
HMGB3P11-201ENST00000440127 PABPC1P11940 636 aaKnown RBP4.58□□□□□ -1.68
HMGB3P11-201ENST00000440127 SF1Q15637 639 aaKnown RBP4.58□□□□□ -1.68
HMGB3P11-201ENST00000440127 CR1LQ2VPA4 569 aa4.58□□□□□ -1.68
HMGB3P11-201ENST00000440127 STYK1Q6J9G0 422 aa4.58□□□□□ -1.68
HMGB3P11-201ENST00000440127 TEPPQ6URK8 271 aa4.58□□□□□ -1.68
HMGB3P11-201ENST00000440127 GLB1LQ6UWU2 654 aa4.58□□□□□ -1.68
HMGB3P11-201ENST00000440127 EP400NLQ6ZTU2 488 aa4.58□□□□□ -1.68
HMGB3P11-201ENST00000440127 MAMDC2Q7Z304 686 aaPredicted RBP4.58□□□□□ -1.68
HMGB3P11-201ENST00000440127 DDX1Q92499 740 aaKnown RBP4.58□□□□□ -1.68
HMGB3P11-201ENST00000440127 GPR20Q99678 358 aa4.58□□□□□ -1.68
HMGB3P11-201ENST00000440127 CDC6Q99741 560 aa4.58□□□□□ -1.68
HMGB3P11-201ENST00000440127 TBX22Q9Y458 520 aa4.58□□□□□ -1.68
HMGB3P11-201ENST00000440127 ADAMTS20P59510 1910 aa4.58□□□□□ -1.68
HMGB3P11-201ENST00000440127 ERCC6L2Q5T890 1561 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 SAMD9LQ8IVG5 1584 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 ARHGAP5Q13017 1502 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 CLASP1Q7Z460 1538 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 KDM5DQ9BY66 1539 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 PLCH2O75038 1416 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 CNTLNQ9NXG0 1405 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 GSTA4O15217 222 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 DLX3O60479 287 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 ITGB3P05106 788 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 LCP1P13796 627 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 ZNF28P17035 718 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 SUMO1P63165 101 aaKnown RBP4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 ZNF568Q3ZCX4 644 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 MTERF2Q49AM1 385 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 ZC3H12BQ5HYM0 836 aaKnown RBP4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 LBX2Q6XYB7 198 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 ZNF662Q6ZS27 426 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 OTOP3Q7RTS5 596 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 FERMT3Q86UX7 667 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 KLHL36Q8N4N3 616 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 FAM26EQ8N5C1 309 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 CELF2-AS1Q8N7Q2 184 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 SAMD11Q96NU1 681 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 DLL4Q9NR61 685 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 SMPD4Q9NXE4 827 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 SIRPGQ9P1W8 387 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 TMA7Q9Y2S6 64 aaKnown RBP4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 PREX2Q70Z35 1606 aa4.57□□□□□ -1.68
HMGB3P11-201ENST00000440127 UHRF1BP1Q6BDS2 1440 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 SPATA31E1Q6ZUB1 1445 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 KIF7Q2M1P5 1343 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 ARID4BQ4LE39 1312 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 TLDC2A0PJX2 215 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 DDX3XO00571 662 aaKnown RBP eCLIP4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 PPM1GO15355 546 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 PDPK1O15530 556 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 LAMTOR5O43504 91 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 PRICKLE3O43900 615 aaPredicted RBP4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 CAPNS1P04632 268 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 ADAM9Q13443 819 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 RASGRF1Q13972 1273 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 PRR31Q5SQ13 230 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 SOGA3Q5TF21 947 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 MCTP2Q6DN12 878 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 TRMT10BQ6PF06 316 aaKnown RBP4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 SCUBE1Q8IWY4 988 aa4.56□□□□□ -1.68
HMGB3P11-201ENST00000440127 IFNL2Q8IZJ0 200 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms