RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 MAP3K14Q99558 947 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 GPR20Q99678 358 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 SPZ1Q9BXG8 430 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 RNPEPQ9H4A4 650 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 SETD4Q9NVD3 440 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 CYP46A1Q9Y6A2 500 aa10.55□□□□□ -0.72
AC011228.1-201ENST00000439027 hCG_1642624A0A1W2PR95 340 aa10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 SH2B2O14492 632 aaPredicted RBP10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 HMGB1P09429 215 aaKnown RBP10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 GNAT1P11488 350 aa10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 BMP1P13497 986 aa10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 RXRAP19793 462 aa10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 RPS6KB1P23443 525 aa10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 KCNQ1P51787 676 aa10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 ARHGAP4P98171 946 aa10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 SEMA3FQ13275 785 aa10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 XRRA1Q6P2D8 792 aa10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 RUFY3Q7L099 469 aa10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 TRIM50Q86XT4 487 aa10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 ZNF687Q8N1G0 1237 aa10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 CMTR1Q8N1G2 835 aaKnown RBP10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 CCDC82Q8N4S0 544 aa10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 SRBD1Q8N5C6 995 aaKnown RBP10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 SEPT8Q92599 483 aa10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 LRRC2Q9BYS8 371 aa10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 PSTPIP2Q9H939 334 aa10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 PDRG1Q9NUG6 133 aa10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 ZNF215Q9UL58 517 aaPredicted RBP10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 COG5Q9UP83 839 aa10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 MYO7AQ13402 2215 aa10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 FRMPD4Q14CM0 1322 aa10.54□□□□□ -0.72
AC011228.1-201ENST00000439027 LINC01553A4QN01 128 aa10.53□□□□□ -0.72
AC011228.1-201ENST00000439027 MEIS2O14770 477 aa10.53□□□□□ -0.72
AC011228.1-201ENST00000439027 LPXNO60711 386 aa10.53□□□□□ -0.72
AC011228.1-201ENST00000439027 UPP2O95045 317 aa10.53□□□□□ -0.72
AC011228.1-201ENST00000439027 CALM1P0DP23 149 aa10.53□□□□□ -0.72
AC011228.1-201ENST00000439027 CALM2P0DP24 149 aa10.53□□□□□ -0.72
AC011228.1-201ENST00000439027 CALM3P0DP25 149 aa10.53□□□□□ -0.72
AC011228.1-201ENST00000439027 SMARCA1P28370 1054 aa10.53□□□□□ -0.72
AC011228.1-201ENST00000439027 ERVK-21P61565 698 aa10.53□□□□□ -0.72
AC011228.1-201ENST00000439027 PCNX4Q63HM2 1172 aa10.53□□□□□ -0.72
AC011228.1-201ENST00000439027 DHX32Q7L7V1 743 aaKnown RBP10.53□□□□□ -0.72
AC011228.1-201ENST00000439027 GIMAP8Q8ND71 665 aaPredicted RBP10.53□□□□□ -0.72
AC011228.1-201ENST00000439027 HLA-CQ95604 372 aa10.53□□□□□ -0.72
AC011228.1-201ENST00000439027 TMEM87BQ96K49 555 aa10.53□□□□□ -0.72
AC011228.1-201ENST00000439027 TCEANC2Q96MN5 208 aa10.53□□□□□ -0.72
AC011228.1-201ENST00000439027 MTA3Q9BTC8 594 aa10.53□□□□□ -0.72
AC011228.1-201ENST00000439027 PKD2L1Q9P0L9 805 aa10.53□□□□□ -0.72
AC011228.1-201ENST00000439027 TELO2Q9Y4R8 837 aa10.53□□□□□ -0.72
AC011228.1-201ENST00000439027 INSL6Q9Y581 213 aa10.53□□□□□ -0.72
AC011228.1-201ENST00000439027 SLC12A7Q9Y666 1083 aa10.53□□□□□ -0.72
AC011228.1-201ENST00000439027 KAT6AQ92794 2004 aa10.53□□□□□ -0.72
AC011228.1-201ENST00000439027 REV3LO60673 3130 aa10.52□□□□□ -0.72
AC011228.1-201ENST00000439027 PIK3CDO00329 1044 aa10.52□□□□□ -0.73
AC011228.1-201ENST00000439027 CD2BP2O95400 341 aaKnown RBP10.52□□□□□ -0.73
AC011228.1-201ENST00000439027 FGD1P98174 961 aa10.52□□□□□ -0.73
AC011228.1-201ENST00000439027 EXOSC10Q01780 885 aaKnown RBP10.52□□□□□ -0.73
AC011228.1-201ENST00000439027 UBE2SQ16763 222 aa10.52□□□□□ -0.73
AC011228.1-201ENST00000439027 PLEKHG4Q58EX7 1191 aa10.52□□□□□ -0.73
AC011228.1-201ENST00000439027 SYNE3Q6ZMZ3 975 aa10.52□□□□□ -0.73
AC011228.1-201ENST00000439027 HEATR3Q7Z4Q2 680 aa10.52□□□□□ -0.73
AC011228.1-201ENST00000439027 SPNS2Q8IVW8 549 aa10.52□□□□□ -0.73
AC011228.1-201ENST00000439027 YME1L1Q96TA2 773 aa10.52□□□□□ -0.73
AC011228.1-201ENST00000439027 SENP7Q9BQF6 1050 aa10.52□□□□□ -0.73
AC011228.1-201ENST00000439027 LARP6Q9BRS8 491 aaKnown RBP10.52□□□□□ -0.73
AC011228.1-201ENST00000439027 SUGCTQ9HAC7 445 aa10.52□□□□□ -0.73
AC011228.1-201ENST00000439027 LMCD1Q9NZU5 365 aa10.52□□□□□ -0.73
AC011228.1-201ENST00000439027 LHX6Q9UPM6 363 aa10.52□□□□□ -0.73
AC011228.1-201ENST00000439027 SPDYE3A6NKU9 549 aa10.51□□□□□ -0.73
AC011228.1-201ENST00000439027 ATP9AO75110 1047 aa10.51□□□□□ -0.73
AC011228.1-201ENST00000439027 CAND2O75155 1236 aa10.51□□□□□ -0.73
AC011228.1-201ENST00000439027 MARK3P27448 753 aa10.51□□□□□ -0.73
AC011228.1-201ENST00000439027 HOXC8P31273 242 aa10.51□□□□□ -0.73
AC011228.1-201ENST00000439027 TCF7P36402 384 aaPredicted RBP10.51□□□□□ -0.73
AC011228.1-201ENST00000439027 LIFRP42702 1097 aa10.51□□□□□ -0.73
AC011228.1-201ENST00000439027 AK2P54819 239 aa10.51□□□□□ -0.73
AC011228.1-201ENST00000439027 PPFIA1Q13136 1202 aa10.51□□□□□ -0.73
AC011228.1-201ENST00000439027 Q6ZUG5 572 aa10.51□□□□□ -0.73
AC011228.1-201ENST00000439027 MICU3Q86XE3 530 aa10.51□□□□□ -0.73
AC011228.1-201ENST00000439027 FANCBQ8NB91 859 aa10.51□□□□□ -0.73
AC011228.1-201ENST00000439027 LMBR1Q8WVP7 490 aa10.51□□□□□ -0.73
AC011228.1-201ENST00000439027 SEPT1Q8WYJ6 367 aa10.51□□□□□ -0.73
AC011228.1-201ENST00000439027 GLG1Q92896 1179 aa10.51□□□□□ -0.73
AC011228.1-201ENST00000439027 SNX21Q969T3 373 aa10.51□□□□□ -0.73
AC011228.1-201ENST00000439027 GPRASP2Q96D09 838 aa10.51□□□□□ -0.73
AC011228.1-201ENST00000439027 CDHR1Q96JP9 859 aa10.51□□□□□ -0.73
AC011228.1-201ENST00000439027 C17orf80Q9BSJ5 609 aa10.51□□□□□ -0.73
AC011228.1-201ENST00000439027 OSBPL7Q9BZF2 842 aa10.51□□□□□ -0.73
AC011228.1-201ENST00000439027 EHMT1Q9H9B1 1298 aa10.51□□□□□ -0.73
AC011228.1-201ENST00000439027 PTPRSQ13332 1948 aa10.5□□□□□ -0.73
AC011228.1-201ENST00000439027 KCNA2P16389 499 aa10.5□□□□□ -0.73
AC011228.1-201ENST00000439027 ITGB5P18084 799 aa10.5□□□□□ -0.73
AC011228.1-201ENST00000439027 COL9A1P20849 921 aa10.5□□□□□ -0.73
AC011228.1-201ENST00000439027 IGBP1P78318 339 aa10.5□□□□□ -0.73
AC011228.1-201ENST00000439027 BECN1Q14457 450 aa10.5□□□□□ -0.73
AC011228.1-201ENST00000439027 TMTC3Q6ZXV5 915 aa10.5□□□□□ -0.73
AC011228.1-201ENST00000439027 RSPH3Q86UC2 560 aa10.5□□□□□ -0.73
AC011228.1-201ENST00000439027 HSCBQ8IWL3 235 aa10.5□□□□□ -0.73
AC011228.1-201ENST00000439027 SPRYD3Q8NCJ5 442 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms