RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 LAMC2Q13753 1193 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 MFSD10Q14728 455 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 CSPP1Q1MSJ5 1256 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 KIAA0753Q2KHM9 967 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 TRIM71Q2Q1W2 868 aaKnown RBP12.43□□□□□ -0.42
HMGCL-204ENST00000436439 KLHL40Q2TBA0 621 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 CELF3Q5SZQ8 465 aaKnown RBP12.43□□□□□ -0.42
HMGCL-204ENST00000436439 TYW1BQ6NUM6 668 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 TRAF7Q6Q0C0 670 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 LRRC8DQ7L1W4 858 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 HEATR3Q7Z4Q2 680 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 VSIG10LQ86VR7 867 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 FCHSD1Q86WN1 690 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 HERC6Q8IVU3 1022 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 MICALL1Q8N3F8 863 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 AFAP1L1Q8TED9 768 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 PIBF1Q8WXW3 757 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 TNFRSF25Q93038 417 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 ZNF396Q96N95 335 aaPredicted RBP12.43□□□□□ -0.42
HMGCL-204ENST00000436439 SCAND2PQ9GZW5 306 aaPredicted RBP12.43□□□□□ -0.42
HMGCL-204ENST00000436439 MAP3K20Q9NYL2 800 aaKnown RBP12.43□□□□□ -0.42
HMGCL-204ENST00000436439 TRANK1O15050 2925 aa12.43□□□□□ -0.42
HMGCL-204ENST00000436439 XIRP2A4UGR9 3374 aa12.42□□□□□ -0.42
HMGCL-204ENST00000436439 SIP14410 1827 aa12.42□□□□□ -0.42
HMGCL-204ENST00000436439 FSD2A1L4K1 749 aa12.42□□□□□ -0.42
HMGCL-204ENST00000436439 SELPP16109 830 aa12.42□□□□□ -0.42
HMGCL-204ENST00000436439 UBA1P22314 1058 aaKnown RBP12.42□□□□□ -0.42
HMGCL-204ENST00000436439 NAPAP54920 295 aa12.42□□□□□ -0.42
HMGCL-204ENST00000436439 WDR5P61964 334 aaKnown RBP12.42□□□□□ -0.42
HMGCL-204ENST00000436439 DEFB103AP81534 67 aa12.42□□□□□ -0.42
HMGCL-204ENST00000436439 TAP1Q03518 808 aa12.42□□□□□ -0.42
HMGCL-204ENST00000436439 GNL2Q13823 731 aaKnown RBP12.42□□□□□ -0.42
HMGCL-204ENST00000436439 BLIDQ8IZY5 108 aa12.42□□□□□ -0.42
HMGCL-204ENST00000436439 SAMD3Q8N6K7 520 aa12.42□□□□□ -0.42
HMGCL-204ENST00000436439 CCDC155Q8N6L0 562 aa12.42□□□□□ -0.42
HMGCL-204ENST00000436439 C7orf31Q8N865 590 aa12.42□□□□□ -0.42
HMGCL-204ENST00000436439 PHOSPHO2Q8TCD6 241 aa12.42□□□□□ -0.42
HMGCL-204ENST00000436439 BICD2Q8TD16 824 aa12.42□□□□□ -0.42
HMGCL-204ENST00000436439 ATXN2LQ8WWM7 1075 aaKnown RBP12.42□□□□□ -0.42
HMGCL-204ENST00000436439 ASB2Q96Q27 587 aa12.42□□□□□ -0.42
HMGCL-204ENST00000436439 KATNAL1Q9BW62 490 aa12.42□□□□□ -0.42
HMGCL-204ENST00000436439 GLT8D2Q9H1C3 349 aa12.42□□□□□ -0.42
HMGCL-204ENST00000436439 C6orf50Q9HD87 102 aa12.42□□□□□ -0.42
HMGCL-204ENST00000436439 PRRC2BQ5JSZ5 2229 aaKnown RBP12.41□□□□□ -0.42
HMGCL-204ENST00000436439 LCHNA4D1U4 455 aa12.41□□□□□ -0.42
HMGCL-204ENST00000436439 GOLGA6L3A6NEY3 463 aa12.41□□□□□ -0.42
HMGCL-204ENST00000436439 GCOM1H8Y6P7 765 aaPredicted RBP12.41□□□□□ -0.42
HMGCL-204ENST00000436439 BAIAP3O94812 1187 aa12.41□□□□□ -0.42
HMGCL-204ENST00000436439 CXCL10P02778 98 aa12.41□□□□□ -0.42
HMGCL-204ENST00000436439 POLR2MP0CAP2 368 aa12.41□□□□□ -0.42
HMGCL-204ENST00000436439 CCND2P30279 289 aa12.41□□□□□ -0.42
HMGCL-204ENST00000436439 MRPS9P82933 396 aaKnown RBP12.41□□□□□ -0.42
HMGCL-204ENST00000436439 NR5A1Q13285 461 aa12.41□□□□□ -0.42
HMGCL-204ENST00000436439 PTK7Q13308 1070 aa12.41□□□□□ -0.42
HMGCL-204ENST00000436439 MBTPS1Q14703 1052 aa12.41□□□□□ -0.42
HMGCL-204ENST00000436439 RILPL1Q5EBL4 403 aa12.41□□□□□ -0.42
HMGCL-204ENST00000436439 ZNF618Q5T7W0 954 aa12.41□□□□□ -0.42
HMGCL-204ENST00000436439 FAM173BQ6P4H8 233 aa12.41□□□□□ -0.42
HMGCL-204ENST00000436439 OXER1Q8TDS5 423 aa12.41□□□□□ -0.42
HMGCL-204ENST00000436439 SPATA33Q96N06 139 aa12.41□□□□□ -0.42
HMGCL-204ENST00000436439 C16orf70Q9BSU1 422 aa12.41□□□□□ -0.42
HMGCL-204ENST00000436439 LMBRD1Q9NUN5 540 aa12.41□□□□□ -0.42
HMGCL-204ENST00000436439 TELO2Q9Y4R8 837 aa12.41□□□□□ -0.42
HMGCL-204ENST00000436439 MTCH2Q9Y6C9 303 aa12.41□□□□□ -0.42
HMGCL-204ENST00000436439 FRMPD4Q14CM0 1322 aa12.4□□□□□ -0.42
HMGCL-204ENST00000436439 SMCO2A6NFE2 343 aa12.4□□□□□ -0.42
HMGCL-204ENST00000436439 YEATS4O95619 227 aa12.4□□□□□ -0.42
HMGCL-204ENST00000436439 TRAPPC10P48553 1259 aa12.4□□□□□ -0.42
HMGCL-204ENST00000436439 SEMA3FQ13275 785 aa12.4□□□□□ -0.42
HMGCL-204ENST00000436439 CNKSR3Q6P9H4 555 aa12.4□□□□□ -0.42
HMGCL-204ENST00000436439 KCNV1Q6PIU1 500 aa12.4□□□□□ -0.42
HMGCL-204ENST00000436439 ARNTL2Q8WYA1 636 aa12.4□□□□□ -0.42
HMGCL-204ENST00000436439 GZF1Q9H116 711 aaPredicted RBP12.4□□□□□ -0.42
HMGCL-204ENST00000436439 RIC8AQ9NPQ8 531 aa12.4□□□□□ -0.42
HMGCL-204ENST00000436439 RTEL1Q9NZ71 1219 aa12.4□□□□□ -0.42
HMGCL-204ENST00000436439 MORC2Q9Y6X9 1032 aaPredicted RBP12.4□□□□□ -0.42
HMGCL-204ENST00000436439 TNFRSF10AO00220 468 aa12.39□□□□□ -0.43
HMGCL-204ENST00000436439 TLL1O43897 1013 aa12.39□□□□□ -0.43
HMGCL-204ENST00000436439 PPFIA4O75335 1185 aa12.39□□□□□ -0.43
HMGCL-204ENST00000436439 TGFB3P10600 412 aa12.39□□□□□ -0.43
HMGCL-204ENST00000436439 POU3F3P20264 500 aaPredicted RBP12.39□□□□□ -0.43
HMGCL-204ENST00000436439 KCNJ6P48051 423 aa12.39□□□□□ -0.43
HMGCL-204ENST00000436439 NASPP49321 788 aaPredicted RBP12.39□□□□□ -0.43
HMGCL-204ENST00000436439 CLK2P49760 499 aaKnown RBP12.39□□□□□ -0.43
HMGCL-204ENST00000436439 MRPS5P82675 430 aaKnown RBP12.39□□□□□ -0.43
HMGCL-204ENST00000436439 TFF2Q03403 129 aa12.39□□□□□ -0.43
HMGCL-204ENST00000436439 FOXD4L6Q3SYB3 417 aaPredicted RBP12.39□□□□□ -0.43
HMGCL-204ENST00000436439 MCTP2Q6DN12 878 aa12.39□□□□□ -0.43
HMGCL-204ENST00000436439 FOXD4L3Q6VB84 417 aaPredicted RBP12.39□□□□□ -0.43
HMGCL-204ENST00000436439 CHAMP1Q96JM3 812 aa12.39□□□□□ -0.43
HMGCL-204ENST00000436439 USP28Q96RU2 1077 aa12.39□□□□□ -0.43
HMGCL-204ENST00000436439 MLXIPQ9HAP2 919 aa12.39□□□□□ -0.43
HMGCL-204ENST00000436439 RCOR1Q9UKL0 485 aa12.39□□□□□ -0.43
HMGCL-204ENST00000436439 PCDHA6Q9UN73 950 aa12.39□□□□□ -0.43
HMGCL-204ENST00000436439 PCDHA8Q9Y5H6 950 aa12.39□□□□□ -0.43
HMGCL-204ENST00000436439 NLRC5Q86WI3 1866 aa12.38□□□□□ -0.43
HMGCL-204ENST00000436439 KAT6AQ92794 2004 aa12.38□□□□□ -0.43
HMGCL-204ENST00000436439 LPXNO60711 386 aa12.38□□□□□ -0.43
HMGCL-204ENST00000436439 MBD3O95983 291 aa12.38□□□□□ -0.43
HMGCL-204ENST00000436439 LGALS2P05162 132 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms