RNA–Protein interactions for RNA: ENST00000435781.5

GTF3A-203, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-203ENST00000435781 BACH1O14867 736 aa23.7■■□□□ 1.38
GTF3A-203ENST00000435781 PSMD10O75832 226 aa23.7■■□□□ 1.38
GTF3A-203ENST00000435781 PTK7Q13308 1070 aa23.7■■□□□ 1.38
GTF3A-203ENST00000435781 PPIGQ13427 754 aaKnown RBP eCLIP23.7■■□□□ 1.38
GTF3A-203ENST00000435781 CCDC60Q8IWA6 550 aaPredicted RBP23.7■■□□□ 1.38
GTF3A-203ENST00000435781 CAGE1Q8TC20 777 aa23.7■■□□□ 1.38
GTF3A-203ENST00000435781 ATP6V0A1Q93050 837 aa23.7■■□□□ 1.38
GTF3A-203ENST00000435781 NRCAMQ92823 1304 aa23.69■■□□□ 1.38
GTF3A-203ENST00000435781 GNAT1P11488 350 aa23.69■■□□□ 1.38
GTF3A-203ENST00000435781 RBL2Q08999 1139 aa23.69■■□□□ 1.38
GTF3A-203ENST00000435781 PPFIA1Q13136 1202 aa23.69■■□□□ 1.38
GTF3A-203ENST00000435781 FAM160B1Q5W0V3 765 aa23.69■■□□□ 1.38
GTF3A-203ENST00000435781 SERINC5Q86VE9 423 aa23.69■■□□□ 1.38
GTF3A-203ENST00000435781 CCDC155Q8N6L0 562 aa23.69■■□□□ 1.38
GTF3A-203ENST00000435781 AFAP1L1Q8TED9 768 aa23.69■■□□□ 1.38
GTF3A-203ENST00000435781 LMBR1Q8WVP7 490 aa23.69■■□□□ 1.38
GTF3A-203ENST00000435781 WNT8BQ93098 351 aa23.69■■□□□ 1.38
GTF3A-203ENST00000435781 SCLYQ96I15 445 aa23.69■■□□□ 1.38
GTF3A-203ENST00000435781 FOXP1Q9H334 677 aaPredicted RBP23.69■■□□□ 1.38
GTF3A-203ENST00000435781 KCNMB3Q9NPA1 279 aa23.69■■□□□ 1.38
GTF3A-203ENST00000435781 WDR64B1ANS9 1081 aa23.68■■□□□ 1.38
GTF3A-203ENST00000435781 TREHO43280 583 aa23.68■■□□□ 1.38
GTF3A-203ENST00000435781 PSAPP07602 524 aa23.68■■□□□ 1.38
GTF3A-203ENST00000435781 GJB2P29033 226 aa23.68■■□□□ 1.38
GTF3A-203ENST00000435781 ADAM17P78536 824 aa23.68■■□□□ 1.38
GTF3A-203ENST00000435781 PLCB4Q15147 1175 aa23.68■■□□□ 1.38
GTF3A-203ENST00000435781 SHHQ15465 462 aa23.68■■□□□ 1.38
GTF3A-203ENST00000435781 TRIM71Q2Q1W2 868 aaKnown RBP23.68■■□□□ 1.38
GTF3A-203ENST00000435781 C9orf50Q5SZB4 431 aa23.68■■□□□ 1.38
GTF3A-203ENST00000435781 SWSAP1Q6NVH7 229 aa23.68■■□□□ 1.38
GTF3A-203ENST00000435781 RETREG2Q8NC44 543 aa23.68■■□□□ 1.38
GTF3A-203ENST00000435781 UNC45AQ9H3U1 944 aa23.68■■□□□ 1.38
GTF3A-203ENST00000435781 ZNF302Q9NR11 478 aa23.68■■□□□ 1.38
GTF3A-203ENST00000435781 PCDHA10Q9Y5I2 948 aa23.68■■□□□ 1.38
GTF3A-203ENST00000435781 WNT7AO00755 349 aa23.67■■□□□ 1.38
GTF3A-203ENST00000435781 CHMP2AO43633 222 aa23.67■■□□□ 1.38
GTF3A-203ENST00000435781 SLC26A2P50443 739 aa23.67■■□□□ 1.38
GTF3A-203ENST00000435781 CUL4AQ13619 759 aa23.67■■□□□ 1.38
GTF3A-203ENST00000435781 GRIK4Q16099 956 aa23.67■■□□□ 1.38
GTF3A-203ENST00000435781 PDXDC2PQ6P474 469 aa23.67■■□□□ 1.38
GTF3A-203ENST00000435781 B3GNT9Q6UX72 402 aa23.67■■□□□ 1.38
GTF3A-203ENST00000435781 POTEDQ86YR6 584 aa23.67■■□□□ 1.38
GTF3A-203ENST00000435781 FAM20AQ96MK3 541 aa23.67■■□□□ 1.38
GTF3A-203ENST00000435781 IL23AQ9NPF7 189 aa23.67■■□□□ 1.38
GTF3A-203ENST00000435781 DISC1Q9NRI5 854 aa23.67■■□□□ 1.38
GTF3A-203ENST00000435781 SMC3Q9UQE7 1217 aa23.67■■□□□ 1.38
GTF3A-203ENST00000435781 TRPC6Q9Y210 931 aa23.67■■□□□ 1.38
GTF3A-203ENST00000435781 SAMM50Q9Y512 469 aa23.67■■□□□ 1.38
GTF3A-203ENST00000435781 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.67■■□□□ 1.38
GTF3A-203ENST00000435781 LOXHD1Q8IVV2 1947 aa23.67■■□□□ 1.38
GTF3A-203ENST00000435781 TBX3O15119 743 aa23.66■■□□□ 1.38
GTF3A-203ENST00000435781 IQCF3P0C7M6 154 aa23.66■■□□□ 1.38
GTF3A-203ENST00000435781 CKBP12277 381 aa23.66■■□□□ 1.38
GTF3A-203ENST00000435781 INSRRP14616 1297 aa23.66■■□□□ 1.38
GTF3A-203ENST00000435781 SFNP31947 248 aa23.66■■□□□ 1.38
GTF3A-203ENST00000435781 JAK3P52333 1124 aa23.66■■□□□ 1.38
GTF3A-203ENST00000435781 C16orf59Q7L2K0 433 aa23.66■■□□□ 1.38
GTF3A-203ENST00000435781 HAS1Q92839 578 aa23.66■■□□□ 1.38
GTF3A-203ENST00000435781 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.66■■□□□ 1.38
GTF3A-203ENST00000435781 MAFBQ9Y5Q3 323 aaPredicted RBP23.66■■□□□ 1.38
GTF3A-203ENST00000435781 SIP14410 1827 aa23.66■■□□□ 1.38
GTF3A-203ENST00000435781 IGSF9BQ9UPX0 1349 aa23.65■■□□□ 1.38
GTF3A-203ENST00000435781 POTEB3A0JP26 581 aa23.65■■□□□ 1.38
GTF3A-203ENST00000435781 KIF28PB7ZC32 967 aa23.65■■□□□ 1.38
GTF3A-203ENST00000435781 ACRP10323 421 aa23.65■■□□□ 1.38
GTF3A-203ENST00000435781 SELPP16109 830 aa23.65■■□□□ 1.38
GTF3A-203ENST00000435781 GNL2Q13823 731 aaKnown RBP23.65■■□□□ 1.38
GTF3A-203ENST00000435781 POTEBQ6S5H4 581 aa23.65■■□□□ 1.38
GTF3A-203ENST00000435781 NOSTRINQ8IVI9 506 aa23.65■■□□□ 1.38
GTF3A-203ENST00000435781 VWCEQ96DN2 955 aa23.65■■□□□ 1.38
GTF3A-203ENST00000435781 GABBR1Q9UBS5 961 aa23.65■■□□□ 1.38
GTF3A-203ENST00000435781 ATP4AP20648 1035 aa23.64■■□□□ 1.37
GTF3A-203ENST00000435781 TMEM240Q5SV17 173 aa23.64■■□□□ 1.37
GTF3A-203ENST00000435781 MARCH8Q5T0T0 291 aa23.64■■□□□ 1.37
GTF3A-203ENST00000435781 LRRC8DQ7L1W4 858 aa23.64■■□□□ 1.37
GTF3A-203ENST00000435781 MIER3Q7Z3K6 550 aa23.64■■□□□ 1.37
GTF3A-203ENST00000435781 RDM1Q8NG50 284 aa23.64■■□□□ 1.37
GTF3A-203ENST00000435781 ATP8B4Q8TF62 1192 aa23.64■■□□□ 1.37
GTF3A-203ENST00000435781 TNPO1Q92973 898 aaKnown RBP23.64■■□□□ 1.37
GTF3A-203ENST00000435781 TUBE1Q9UJT0 475 aa23.64■■□□□ 1.37
GTF3A-203ENST00000435781 VAV3Q9UKW4 847 aa23.64■■□□□ 1.37
GTF3A-203ENST00000435781 MBLAC1A4D2B0 266 aaPredicted RBP23.63■■□□□ 1.37
GTF3A-203ENST00000435781 RRN3P2A6NIE6 340 aa23.63■■□□□ 1.37
GTF3A-203ENST00000435781 ATP2B1P20020 1258 aa23.63■■□□□ 1.37
GTF3A-203ENST00000435781 U2AF2P26368 475 aaKnown RBP eCLIP23.63■■□□□ 1.37
GTF3A-203ENST00000435781 RFC2P35250 354 aa23.63■■□□□ 1.37
GTF3A-203ENST00000435781 THPOP40225 353 aa23.63■■□□□ 1.37
GTF3A-203ENST00000435781 IGBP1P78318 339 aa23.63■■□□□ 1.37
GTF3A-203ENST00000435781 PPP2R5CQ13362 524 aa23.63■■□□□ 1.37
GTF3A-203ENST00000435781 ZNF618Q5T7W0 954 aa23.63■■□□□ 1.37
GTF3A-203ENST00000435781 PSRC1Q6PGN9 363 aaPredicted RBP23.63■■□□□ 1.37
GTF3A-203ENST00000435781 TRAF7Q6Q0C0 670 aa23.63■■□□□ 1.37
GTF3A-203ENST00000435781 RPUSD2Q8IZ73 545 aaKnown RBP23.63■■□□□ 1.37
GTF3A-203ENST00000435781 MARCH6O60337 910 aa23.62■■□□□ 1.37
GTF3A-203ENST00000435781 HBP1O60381 514 aa23.62■■□□□ 1.37
GTF3A-203ENST00000435781 NEMFO60524 1076 aa23.62■■□□□ 1.37
GTF3A-203ENST00000435781 FXR1P51114 621 aaKnown RBP eCLIP23.62■■□□□ 1.37
GTF3A-203ENST00000435781 UGCGQ16739 394 aa23.62■■□□□ 1.37
GTF3A-203ENST00000435781 LRIT3Q3SXY7 679 aa23.62■■□□□ 1.37
GTF3A-203ENST00000435781 RUFY4Q6ZNE9 571 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms