RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 PIK3CDO00329 1044 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 RAD21O60216 631 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 RPS6KA5O75582 802 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 MMP10P09238 476 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 NR2F2P24468 414 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 HSPA1LP34931 641 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 TNNT3P45378 269 aaPredicted RBP17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 APBA1Q02410 837 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 RAD51AP2Q09MP3 1159 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 KCNH2Q12809 1159 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 KNOP1Q1ED39 458 aaKnown RBP17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 SFR1Q86XK3 245 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 GOLGA5Q8TBA6 731 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 LRRC1Q9BTT6 524 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 POLR3CQ9BUI4 534 aaPredicted RBP17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 PCDHGC5Q9Y5F6 944 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 SPDYE3A6NKU9 549 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 PDXKO00764 312 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 MSH4O15457 936 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 NCK2O43639 380 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 ECE2O60344 883 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 ENTPD3O75355 529 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 TNFRSF8P28908 595 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 SNAP25P60880 206 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 JAG1P78504 1218 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 PABPC4Q13310 644 aaKnown RBP eCLIP17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 EZH2Q15910 746 aaKnown RBP17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 HDAC7Q8WUI4 952 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 TRIM34Q9BYJ4 488 aa17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 DMGDHQ9UI17 866 aaKnown RBP17.69■□□□□ 0.42
HLA-DQB2-231ENST00000435145 MYH10P35580 1976 aa17.68■□□□□ 0.42
HLA-DQB2-231ENST00000435145 A0A087X0T9 212 aa17.68■□□□□ 0.42
HLA-DQB2-231ENST00000435145 BTNL10A8MVZ5 291 aa17.68■□□□□ 0.42
HLA-DQB2-231ENST00000435145 FAM228BP0C875 321 aa17.68■□□□□ 0.42
HLA-DQB2-231ENST00000435145 ACTN2P35609 894 aa17.68■□□□□ 0.42
HLA-DQB2-231ENST00000435145 GSPT2Q8IYD1 628 aaKnown RBP17.68■□□□□ 0.42
HLA-DQB2-231ENST00000435145 TBC1D5Q92609 795 aa17.68■□□□□ 0.42
HLA-DQB2-231ENST00000435145 HDAC9Q9UKV0 1011 aa17.68■□□□□ 0.42
HLA-DQB2-231ENST00000435145 AGPSO00116 658 aa17.67■□□□□ 0.42
HLA-DQB2-231ENST00000435145 MEIS1O00470 390 aa17.67■□□□□ 0.42
HLA-DQB2-231ENST00000435145 BUB1O43683 1085 aa17.67■□□□□ 0.42
HLA-DQB2-231ENST00000435145 RNF40O75150 1001 aa17.67■□□□□ 0.42
HLA-DQB2-231ENST00000435145 GDF11O95390 407 aa17.67■□□□□ 0.42
HLA-DQB2-231ENST00000435145 BMP3P12645 472 aa17.67■□□□□ 0.42
HLA-DQB2-231ENST00000435145 RAPGEF1Q13905 1077 aa17.67■□□□□ 0.42
HLA-DQB2-231ENST00000435145 ASIC2Q16515 512 aa17.67■□□□□ 0.42
HLA-DQB2-231ENST00000435145 ZSCAN26Q16670 478 aa17.67■□□□□ 0.42
HLA-DQB2-231ENST00000435145 ARMCX3Q9UH62 379 aaPredicted RBP17.67■□□□□ 0.42
HLA-DQB2-231ENST00000435145 KLRC1P26715 233 aa17.67■□□□□ 0.42
HLA-DQB2-231ENST00000435145 CXCR5P32302 372 aa17.67■□□□□ 0.42
HLA-DQB2-231ENST00000435145 PAFAH1B1P43034 410 aa17.67■□□□□ 0.42
HLA-DQB2-231ENST00000435145 RBM5P52756 815 aaKnown RBP eCLIP17.67■□□□□ 0.42
HLA-DQB2-231ENST00000435145 KLHL30Q0D2K2 578 aa17.67■□□□□ 0.42
HLA-DQB2-231ENST00000435145 USH1GQ495M9 461 aa17.67■□□□□ 0.42
HLA-DQB2-231ENST00000435145 GLE1Q53GS7 698 aaKnown RBP17.67■□□□□ 0.42
HLA-DQB2-231ENST00000435145 STYK1Q6J9G0 422 aa17.67■□□□□ 0.42
HLA-DQB2-231ENST00000435145 IRF2BP2Q7Z5L9 587 aa17.67■□□□□ 0.42
HLA-DQB2-231ENST00000435145 TYW1Q9NV66 732 aaKnown RBP17.67■□□□□ 0.42
HLA-DQB2-231ENST00000435145 FBXL5Q9UKA1 691 aa17.67■□□□□ 0.42
HLA-DQB2-231ENST00000435145 KIF13BQ9NQT8 1826 aa17.67■□□□□ 0.42
HLA-DQB2-231ENST00000435145 IGLV3-22A0A075B6J6 115 aa17.66■□□□□ 0.42
HLA-DQB2-231ENST00000435145 SLC16A3O15427 465 aaKnown RBP17.66■□□□□ 0.42
HLA-DQB2-231ENST00000435145 CALUO43852 315 aaPredicted RBP17.66■□□□□ 0.42
HLA-DQB2-231ENST00000435145 EYA4O95677 639 aa17.66■□□□□ 0.42
HLA-DQB2-231ENST00000435145 AFPP02771 609 aaKnown RBP17.66■□□□□ 0.42
HLA-DQB2-231ENST00000435145 MYBP10242 640 aa17.66■□□□□ 0.42
HLA-DQB2-231ENST00000435145 RRP1BQ14684 758 aaKnown RBP17.66■□□□□ 0.42
HLA-DQB2-231ENST00000435145 CCDC181Q5TID7 509 aa17.66■□□□□ 0.42
HLA-DQB2-231ENST00000435145 FAM133AQ8N9E0 248 aa17.66■□□□□ 0.42
HLA-DQB2-231ENST00000435145 ZHX3Q9H4I2 956 aa17.66■□□□□ 0.42
HLA-DQB2-231ENST00000435145 SMARCAL1Q9NZC9 954 aa17.66■□□□□ 0.42
HLA-DQB2-231ENST00000435145 ASTN1O14525 1302 aa17.66■□□□□ 0.42
HLA-DQB2-231ENST00000435145 ATP8B3O60423 1300 aa17.66■□□□□ 0.42
HLA-DQB2-231ENST00000435145 A0A1W2PRG0 241 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 PHACTR2O75167 634 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 PALMO75781 387 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 GH2P01242 217 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 C10orf76Q5T2E6 689 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 MEI1Q5TIA1 1274 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 FLAD1Q8NFF5 587 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 ZNF622Q969S3 477 aaKnown RBP eCLIP17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 PSMB7Q99436 277 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 EIF2AK1Q9BQI3 630 aaKnown RBP17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 RUSC1Q9BVN2 902 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 FAM204AQ9H8W3 233 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 OLFML3Q9NRN5 406 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 RBM12Q9NTZ6 932 aaKnown RBP17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 EHD2Q9NZN4 543 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 STIM2Q9P246 746 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 NENFQ9UMX5 172 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 EP400Q96L91 3159 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 GRID2IPA4D2P6 1211 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 EML1O00423 815 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 AKAP3O75969 853 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 UCHL3P15374 230 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 PON1P27169 355 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 ANXA13P27216 316 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 PRKCIP41743 596 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 EPS15P42566 896 aa17.65■□□□□ 0.42
HLA-DQB2-231ENST00000435145 EPHA7Q15375 998 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms