RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 LXNQ9BS40 222 aa29.63■■■□□ 2.33
TMEM248-205ENST00000433271 MAGEF1Q9HAY2 307 aa29.63■■■□□ 2.33
TMEM248-205ENST00000433271 BLOC1S4Q9NUP1 217 aa29.63■■■□□ 2.33
TMEM248-205ENST00000433271 HOOK1Q9UJC3 728 aaKnown RBP29.63■■■□□ 2.33
TMEM248-205ENST00000433271 ARHGAP1Q07960 439 aa29.62■■■□□ 2.33
TMEM248-205ENST00000433271 BANK1Q8NDB2 785 aa29.62■■■□□ 2.33
TMEM248-205ENST00000433271 RAET1EQ8TD07 263 aa29.62■■■□□ 2.33
TMEM248-205ENST00000433271 SEPT1Q8WYJ6 367 aa29.62■■■□□ 2.33
TMEM248-205ENST00000433271 SPATA33Q96N06 139 aa29.62■■■□□ 2.33
TMEM248-205ENST00000433271 ZSWIM4Q9H7M6 989 aa29.62■■■□□ 2.33
TMEM248-205ENST00000433271 SUPT20HL2P0C7V6 817 aa29.61■■■□□ 2.33
TMEM248-205ENST00000433271 KCNK18Q7Z418 384 aa29.61■■■□□ 2.33
TMEM248-205ENST00000433271 SH3RF1Q7Z6J0 888 aa29.61■■■□□ 2.33
TMEM248-205ENST00000433271 PXYLP1Q8TE99 480 aa29.61■■■□□ 2.33
TMEM248-205ENST00000433271 PAGE5Q96GU1 130 aa29.61■■■□□ 2.33
TMEM248-205ENST00000433271 DNM3Q9UQ16 869 aa29.61■■■□□ 2.33
TMEM248-205ENST00000433271 GSTTP1A0A1W2PQM5 241 aa29.6■■■□□ 2.33
TMEM248-205ENST00000433271 ADCY3O60266 1144 aa29.6■■■□□ 2.33
TMEM248-205ENST00000433271 LETM1O95202 739 aaPredicted RBP29.6■■■□□ 2.33
TMEM248-205ENST00000433271 PSMC5P62195 406 aa29.6■■■□□ 2.33
TMEM248-205ENST00000433271 MDM2Q00987 491 aaPredicted RBP29.6■■■□□ 2.33
TMEM248-205ENST00000433271 HSDL1Q3SXM5 330 aa29.6■■■□□ 2.33
TMEM248-205ENST00000433271 RAD54LQ92698 747 aa29.6■■■□□ 2.33
TMEM248-205ENST00000433271 GPR20Q99678 358 aa29.6■■■□□ 2.33
TMEM248-205ENST00000433271 ANP32EQ9BTT0 268 aa29.6■■■□□ 2.33
TMEM248-205ENST00000433271 KBTBD4Q9NVX7 518 aa29.6■■■□□ 2.33
TMEM248-205ENST00000433271 WRAP73Q9P2S5 460 aaPredicted RBP29.6■■■□□ 2.33
TMEM248-205ENST00000433271 FAM184BQ9ULE4 1060 aa29.6■■■□□ 2.33
TMEM248-205ENST00000433271 NOP56O00567 594 aaKnown RBP29.6■■■□□ 2.33
TMEM248-205ENST00000433271 LYPLA2O95372 231 aa29.6■■■□□ 2.33
TMEM248-205ENST00000433271 CYBAP13498 195 aa29.6■■■□□ 2.33
TMEM248-205ENST00000433271 ELNP15502 786 aa29.6■■■□□ 2.33
TMEM248-205ENST00000433271 ZSCAN23Q3MJ62 389 aa29.6■■■□□ 2.33
TMEM248-205ENST00000433271 GJC2Q5T442 439 aaPredicted RBP29.6■■■□□ 2.33
TMEM248-205ENST00000433271 LARP4BQ92615 738 aaKnown RBP29.6■■■□□ 2.33
TMEM248-205ENST00000433271 NACC1Q96RE7 527 aa29.6■■■□□ 2.33
TMEM248-205ENST00000433271 GZF1Q9H116 711 aaPredicted RBP29.6■■■□□ 2.33
TMEM248-205ENST00000433271 IGKV6D-21A0A0A0MT36 114 aa29.59■■■□□ 2.33
TMEM248-205ENST00000433271 SWSAP1Q6NVH7 229 aa29.59■■■□□ 2.33
TMEM248-205ENST00000433271 RBM43Q6ZSC3 357 aaKnown RBP29.59■■■□□ 2.33
TMEM248-205ENST00000433271 C4orf19Q8IY42 314 aa29.59■■■□□ 2.33
TMEM248-205ENST00000433271 ATP6V0A1Q93050 837 aa29.59■■■□□ 2.33
TMEM248-205ENST00000433271 GABBR1Q9UBS5 961 aa29.59■■■□□ 2.33
TMEM248-205ENST00000433271 E9PMD0 336 aa29.58■■■□□ 2.33
TMEM248-205ENST00000433271 ADCY6O43306 1168 aa29.58■■■□□ 2.33
TMEM248-205ENST00000433271 DKC1O60832 514 aaKnown RBP eCLIP29.58■■■□□ 2.33
TMEM248-205ENST00000433271 AFMP43652 599 aa29.58■■■□□ 2.33
TMEM248-205ENST00000433271 PSMC6P62333 389 aa29.58■■■□□ 2.33
TMEM248-205ENST00000433271 POSTNQ15063 836 aa29.58■■■□□ 2.33
TMEM248-205ENST00000433271 SV2BQ7L1I2 683 aa29.58■■■□□ 2.33
TMEM248-205ENST00000433271 TRPV1Q8NER1 839 aa29.58■■■□□ 2.33
TMEM248-205ENST00000433271 MTRQ99707 1265 aa29.58■■■□□ 2.33
TMEM248-205ENST00000433271 GNEQ9Y223 722 aaKnown RBP29.58■■■□□ 2.33
TMEM248-205ENST00000433271 TRIM17Q9Y577 477 aa29.58■■■□□ 2.33
TMEM248-205ENST00000433271 FOXN1O15353 648 aa29.57■■■□□ 2.32
TMEM248-205ENST00000433271 HMGCRP04035 888 aa29.57■■■□□ 2.32
TMEM248-205ENST00000433271 PTGS1P23219 599 aa29.57■■■□□ 2.32
TMEM248-205ENST00000433271 TCF7P36402 384 aaPredicted RBP29.57■■■□□ 2.32
TMEM248-205ENST00000433271 UGCGQ16739 394 aa29.57■■■□□ 2.32
TMEM248-205ENST00000433271 CCDC60Q8IWA6 550 aaPredicted RBP29.57■■■□□ 2.32
TMEM248-205ENST00000433271 GRAMD1CQ8IYS0 662 aa29.57■■■□□ 2.32
TMEM248-205ENST00000433271 PPTC7Q8NI37 304 aa29.57■■■□□ 2.32
TMEM248-205ENST00000433271 BACH1O14867 736 aa29.56■■■□□ 2.32
TMEM248-205ENST00000433271 AKR1A1P14550 325 aa29.56■■■□□ 2.32
TMEM248-205ENST00000433271 AMPD3Q01432 767 aa29.56■■■□□ 2.32
TMEM248-205ENST00000433271 CACNB2Q08289 660 aaPredicted RBP29.56■■■□□ 2.32
TMEM248-205ENST00000433271 MCM6Q14566 821 aa29.56■■■□□ 2.32
TMEM248-205ENST00000433271 ZNF302Q9NR11 478 aa29.56■■■□□ 2.32
TMEM248-205ENST00000433271 Q9Y3F1 56 aa29.56■■■□□ 2.32
TMEM248-205ENST00000433271 MAFBQ9Y5Q3 323 aaPredicted RBP29.56■■■□□ 2.32
TMEM248-205ENST00000433271 EYA4O95677 639 aa29.56■■■□□ 2.32
TMEM248-205ENST00000433271 PLA2G4BP0C869 781 aa29.56■■■□□ 2.32
TMEM248-205ENST00000433271 XRCC6P12956 609 aaKnown RBP eCLIP29.56■■■□□ 2.32
TMEM248-205ENST00000433271 TRIM32Q13049 653 aa29.56■■■□□ 2.32
TMEM248-205ENST00000433271 PNOCQ13519 176 aa29.56■■■□□ 2.32
TMEM248-205ENST00000433271 CKAP2LQ8IYA6 745 aa29.56■■■□□ 2.32
TMEM248-205ENST00000433271 PIGOQ8TEQ8 1089 aa29.56■■■□□ 2.32
TMEM248-205ENST00000433271 STAMQ92783 540 aa29.56■■■□□ 2.32
TMEM248-205ENST00000433271 IGSF9BQ9UPX0 1349 aa29.55■■■□□ 2.32
TMEM248-205ENST00000433271 A0A087WWV3 80 aa29.55■■■□□ 2.32
TMEM248-205ENST00000433271 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP29.55■■■□□ 2.32
TMEM248-205ENST00000433271 MYL1P05976 194 aa29.55■■■□□ 2.32
TMEM248-205ENST00000433271 FAM160B1Q5W0V3 765 aa29.55■■■□□ 2.32
TMEM248-205ENST00000433271 SLAIN1Q8ND83 568 aa29.55■■■□□ 2.32
TMEM248-205ENST00000433271 OR6J1Q8NGC5 347 aa29.55■■■□□ 2.32
TMEM248-205ENST00000433271 AFAP1L1Q8TED9 768 aa29.55■■■□□ 2.32
TMEM248-205ENST00000433271 AFG1LQ8WV93 481 aa29.55■■■□□ 2.32
TMEM248-205ENST00000433271 LGR5O75473 907 aa29.54■■■□□ 2.32
TMEM248-205ENST00000433271 PRKAR2AP13861 404 aaKnown RBP29.54■■■□□ 2.32
TMEM248-205ENST00000433271 SYT2Q8N9I0 419 aaPredicted RBP29.54■■■□□ 2.32
TMEM248-205ENST00000433271 PCYT2Q99447 389 aa29.54■■■□□ 2.32
TMEM248-205ENST00000433271 LRRC27Q9C0I9 530 aa29.54■■■□□ 2.32
TMEM248-205ENST00000433271 KIAA1468Q9P260 1216 aa29.54■■■□□ 2.32
TMEM248-205ENST00000433271 ZBTB39O15060 712 aa29.53■■■□□ 2.32
TMEM248-205ENST00000433271 DYNC1LI2O43237 492 aaPredicted RBP29.53■■■□□ 2.32
TMEM248-205ENST00000433271 GTPBP6O43824 516 aaPredicted RBP29.53■■■□□ 2.32
TMEM248-205ENST00000433271 ZNF862O60290 1169 aa29.53■■■□□ 2.32
TMEM248-205ENST00000433271 STAT5BP51692 787 aa29.53■■■□□ 2.32
TMEM248-205ENST00000433271 SLC12A3P55017 1021 aa29.53■■■□□ 2.32
TMEM248-205ENST00000433271 DHX8Q14562 1220 aaKnown RBP29.53■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms