RNA–Protein interactions for RNA: ENST00000431690.5

SNED1-207, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-207ENST00000431690 LRRC8DQ7L1W4 858 aa17.73■□□□□ 0.43
SNED1-207ENST00000431690 PLPPR4Q7Z2D5 763 aa17.73■□□□□ 0.43
SNED1-207ENST00000431690 SMAP1Q8IYB5 467 aaPredicted RBP17.73■□□□□ 0.43
SNED1-207ENST00000431690 AFAP1L1Q8TED9 768 aa17.73■□□□□ 0.43
SNED1-207ENST00000431690 LMBR1Q8WVP7 490 aa17.73■□□□□ 0.43
SNED1-207ENST00000431690 DHX38Q92620 1227 aaKnown RBP17.73■□□□□ 0.43
SNED1-207ENST00000431690 GJA10Q969M2 543 aa17.73■□□□□ 0.43
SNED1-207ENST00000431690 TMX3Q96JJ7 454 aa17.73■□□□□ 0.43
SNED1-207ENST00000431690 NAP1L4Q99733 375 aaKnown RBP17.73■□□□□ 0.43
SNED1-207ENST00000431690 TEKT3Q9BXF9 490 aa17.73■□□□□ 0.43
SNED1-207ENST00000431690 FTOQ9C0B1 505 aaKnown RBP eCLIP17.73■□□□□ 0.43
SNED1-207ENST00000431690 ZNF302Q9NR11 478 aa17.73■□□□□ 0.43
SNED1-207ENST00000431690 SOX1O00570 391 aaPredicted RBP17.72■□□□□ 0.43
SNED1-207ENST00000431690 CHMP2AO43633 222 aa17.72■□□□□ 0.43
SNED1-207ENST00000431690 CD2BP2O95400 341 aaKnown RBP17.72■□□□□ 0.43
SNED1-207ENST00000431690 PSAPP07602 524 aa17.72■□□□□ 0.43
SNED1-207ENST00000431690 CKBP12277 381 aa17.72■□□□□ 0.43
SNED1-207ENST00000431690 SELPP16109 830 aa17.72■□□□□ 0.43
SNED1-207ENST00000431690 RFC2P35250 354 aa17.72■□□□□ 0.43
SNED1-207ENST00000431690 THPOP40225 353 aa17.72■□□□□ 0.43
SNED1-207ENST00000431690 GRIK4Q16099 956 aa17.72■□□□□ 0.43
SNED1-207ENST00000431690 EARS2Q5JPH6 523 aaKnown RBP17.72■□□□□ 0.43
SNED1-207ENST00000431690 PDXDC2PQ6P474 469 aa17.72■□□□□ 0.43
SNED1-207ENST00000431690 C16orf59Q7L2K0 433 aa17.72■□□□□ 0.43
SNED1-207ENST00000431690 SERINC5Q86VE9 423 aa17.72■□□□□ 0.43
SNED1-207ENST00000431690 CKAP2LQ8IYA6 745 aa17.72■□□□□ 0.43
SNED1-207ENST00000431690 SLC5A5Q92911 643 aa17.72■□□□□ 0.43
SNED1-207ENST00000431690 RIT2Q99578 217 aa17.72■□□□□ 0.43
SNED1-207ENST00000431690 PCDHA10Q9Y5I2 948 aa17.72■□□□□ 0.43
SNED1-207ENST00000431690 FAM205CA6NFA0 338 aa17.71■□□□□ 0.43
SNED1-207ENST00000431690 WDR64B1ANS9 1081 aa17.71■□□□□ 0.43
SNED1-207ENST00000431690 SLC37A4O43826 429 aa17.71■□□□□ 0.43
SNED1-207ENST00000431690 PFKMP08237 780 aa17.71■□□□□ 0.43
SNED1-207ENST00000431690 GCFC2P16383 781 aaKnown RBP17.71■□□□□ 0.43
SNED1-207ENST00000431690 HOXC8P31273 242 aa17.71■□□□□ 0.43
SNED1-207ENST00000431690 SLC26A2P50443 739 aa17.71■□□□□ 0.43
SNED1-207ENST00000431690 GNL2Q13823 731 aaKnown RBP17.71■□□□□ 0.43
SNED1-207ENST00000431690 PLCB4Q15147 1175 aa17.71■□□□□ 0.43
SNED1-207ENST00000431690 PPP4R3AQ6IN85 833 aa17.71■□□□□ 0.43
SNED1-207ENST00000431690 OTOP2Q7RTS6 562 aa17.71■□□□□ 0.43
SNED1-207ENST00000431690 TRMT1LQ7Z2T5 733 aaKnown RBP17.71■□□□□ 0.43
SNED1-207ENST00000431690 CCDC60Q8IWA6 550 aaPredicted RBP17.71■□□□□ 0.43
SNED1-207ENST00000431690 WNT8BQ93098 351 aa17.71■□□□□ 0.43
SNED1-207ENST00000431690 LRCH3Q96II8 777 aa17.71■□□□□ 0.43
SNED1-207ENST00000431690 MBOAT7Q96N66 472 aa17.71■□□□□ 0.43
SNED1-207ENST00000431690 MTIF3Q9H2K0 278 aaKnown RBP17.71■□□□□ 0.43
SNED1-207ENST00000431690 IGKV6D-21A0A0A0MT36 114 aa17.7■□□□□ 0.42
SNED1-207ENST00000431690 POTEB3A0JP26 581 aa17.7■□□□□ 0.42
SNED1-207ENST00000431690 RRN3P2A6NIE6 340 aa17.7■□□□□ 0.42
SNED1-207ENST00000431690 INSRRP14616 1297 aa17.7■□□□□ 0.42
SNED1-207ENST00000431690 ZNF618Q5T7W0 954 aa17.7■□□□□ 0.42
SNED1-207ENST00000431690 POTEBQ6S5H4 581 aa17.7■□□□□ 0.42
SNED1-207ENST00000431690 TNFRSF25Q93038 417 aa17.7■□□□□ 0.42
SNED1-207ENST00000431690 UNC45AQ9H3U1 944 aa17.7■□□□□ 0.42
SNED1-207ENST00000431690 DISC1Q9NRI5 854 aa17.7■□□□□ 0.42
SNED1-207ENST00000431690 GABBR1Q9UBS5 961 aa17.7■□□□□ 0.42
SNED1-207ENST00000431690 TUBE1Q9UJT0 475 aa17.7■□□□□ 0.42
SNED1-207ENST00000431690 KIF3AQ9Y496 699 aa17.7■□□□□ 0.42
SNED1-207ENST00000431690 TRIOBPQ9H2D6 2365 aa17.7■□□□□ 0.42
SNED1-207ENST00000431690 ZBBXA8MT70 800 aa17.69■□□□□ 0.42
SNED1-207ENST00000431690 PARNO95453 639 aaKnown RBP17.69■□□□□ 0.42
SNED1-207ENST00000431690 ACTN1P12814 892 aa17.69■□□□□ 0.42
SNED1-207ENST00000431690 SFNP31947 248 aa17.69■□□□□ 0.42
SNED1-207ENST00000431690 JAK3P52333 1124 aa17.69■□□□□ 0.42
SNED1-207ENST00000431690 RBL2Q08999 1139 aa17.69■□□□□ 0.42
SNED1-207ENST00000431690 TRIM71Q2Q1W2 868 aaKnown RBP17.69■□□□□ 0.42
SNED1-207ENST00000431690 MIER3Q7Z3K6 550 aa17.69■□□□□ 0.42
SNED1-207ENST00000431690 FBXO18Q8NFZ0 1043 aa17.69■□□□□ 0.42
SNED1-207ENST00000431690 ETNPPLQ8TBG4 499 aa17.69■□□□□ 0.42
SNED1-207ENST00000431690 RSPH10B2B2RC85 870 aa17.68■□□□□ 0.42
SNED1-207ENST00000431690 HBP1O60381 514 aa17.68■□□□□ 0.42
SNED1-207ENST00000431690 PSMD10O75832 226 aa17.68■□□□□ 0.42
SNED1-207ENST00000431690 BAG4O95429 457 aaKnown RBP17.68■□□□□ 0.42
SNED1-207ENST00000431690 CTSHP09668 335 aa17.68■□□□□ 0.42
SNED1-207ENST00000431690 RSPH10BP0C881 870 aa17.68■□□□□ 0.42
SNED1-207ENST00000431690 ATP2B1P20020 1258 aa17.68■□□□□ 0.42
SNED1-207ENST00000431690 ADAM17P78536 824 aa17.68■□□□□ 0.42
SNED1-207ENST00000431690 TAF2Q6P1X5 1199 aa17.68■□□□□ 0.42
SNED1-207ENST00000431690 RSPH3Q86UC2 560 aa17.68■□□□□ 0.42
SNED1-207ENST00000431690 ATP8B4Q8TF62 1192 aa17.68■□□□□ 0.42
SNED1-207ENST00000431690 HERVK_113Q902F9 699 aa17.68■□□□□ 0.42
SNED1-207ENST00000431690 FAM20AQ96MK3 541 aa17.68■□□□□ 0.42
SNED1-207ENST00000431690 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.67■□□□□ 0.42
SNED1-207ENST00000431690 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.67■□□□□ 0.42
SNED1-207ENST00000431690 MARCH8Q5T0T0 291 aa17.67■□□□□ 0.42
SNED1-207ENST00000431690 RUFY4Q6ZNE9 571 aa17.67■□□□□ 0.42
SNED1-207ENST00000431690 POTEDQ86YR6 584 aa17.67■□□□□ 0.42
SNED1-207ENST00000431690 TRAPPC12Q8WVT3 735 aa17.67■□□□□ 0.42
SNED1-207ENST00000431690 FOXP1Q9H334 677 aaPredicted RBP17.67■□□□□ 0.42
SNED1-207ENST00000431690 SMC3Q9UQE7 1217 aa17.67■□□□□ 0.42
SNED1-207ENST00000431690 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.67■□□□□ 0.42
SNED1-207ENST00000431690 MAFBQ9Y5Q3 323 aaPredicted RBP17.67■□□□□ 0.42
SNED1-207ENST00000431690 TBX3O15119 743 aa17.66■□□□□ 0.42
SNED1-207ENST00000431690 NBNO60934 754 aa17.66■□□□□ 0.42
SNED1-207ENST00000431690 CAND2O75155 1236 aa17.66■□□□□ 0.42
SNED1-207ENST00000431690 ATP4AP20648 1035 aa17.66■□□□□ 0.42
SNED1-207ENST00000431690 GJB2P29033 226 aa17.66■□□□□ 0.42
SNED1-207ENST00000431690 ZNF484Q5JVG2 852 aa17.66■□□□□ 0.42
SNED1-207ENST00000431690 SLFN12Q8IYM2 578 aa17.66■□□□□ 0.42
SNED1-207ENST00000431690 RDM1Q8NG50 284 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms