RNA–Protein interactions for RNA: ENST00000431183.6

SMPD4-205, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,614 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-205ENST00000431183 RBM46Q8TBY0 533 aaKnown RBP12.5□□□□□ -0.41
SMPD4-205ENST00000431183 LENG1Q96BZ8 264 aaPredicted RBP12.5□□□□□ -0.41
SMPD4-205ENST00000431183 NT5C3AQ9H0P0 336 aa12.5□□□□□ -0.41
SMPD4-205ENST00000431183 KCNF1Q9H3M0 494 aa12.5□□□□□ -0.41
SMPD4-205ENST00000431183 CYP39A1Q9NYL5 469 aa12.5□□□□□ -0.41
SMPD4-205ENST00000431183 NRDCO43847 1150 aa12.49□□□□□ -0.41
SMPD4-205ENST00000431183 SLITRK3O94933 977 aa12.49□□□□□ -0.41
SMPD4-205ENST00000431183 CCND2P30279 289 aa12.49□□□□□ -0.41
SMPD4-205ENST00000431183 KRT31Q15323 416 aa12.49□□□□□ -0.41
SMPD4-205ENST00000431183 SPATA1Q5VX52 437 aa12.49□□□□□ -0.41
SMPD4-205ENST00000431183 FAM178BQ8IXR5 827 aa12.49□□□□□ -0.41
SMPD4-205ENST00000431183 KIAA0895Q8NCT3 520 aa12.49□□□□□ -0.41
SMPD4-205ENST00000431183 IPO4Q8TEX9 1081 aaKnown RBP12.49□□□□□ -0.41
SMPD4-205ENST00000431183 MMP19Q99542 508 aa12.49□□□□□ -0.41
SMPD4-205ENST00000431183 MAST2Q6P0Q8 1798 aa12.49□□□□□ -0.41
SMPD4-205ENST00000431183 OSBPP22059 807 aa12.49□□□□□ -0.41
SMPD4-205ENST00000431183 MYOCDQ8IZQ8 938 aa12.49□□□□□ -0.41
SMPD4-205ENST00000431183 TRAPPC12Q8WVT3 735 aa12.49□□□□□ -0.41
SMPD4-205ENST00000431183 TMEM143Q96AN5 459 aa12.49□□□□□ -0.41
SMPD4-205ENST00000431183 K7ENM7 598 aa12.49□□□□□ -0.41
SMPD4-205ENST00000431183 SLC16A4O15374 487 aa12.49□□□□□ -0.41
SMPD4-205ENST00000431183 SPATA31C1P0DKV0 1188 aa12.49□□□□□ -0.41
SMPD4-205ENST00000431183 CYP11B2P19099 503 aa12.49□□□□□ -0.41
SMPD4-205ENST00000431183 FXR2P51116 673 aaKnown RBP eCLIP12.49□□□□□ -0.41
SMPD4-205ENST00000431183 IRX5P78411 483 aaPredicted RBP12.49□□□□□ -0.41
SMPD4-205ENST00000431183 PTPROQ16827 1216 aa12.49□□□□□ -0.41
SMPD4-205ENST00000431183 CCDC127Q96BQ5 260 aa12.49□□□□□ -0.41
SMPD4-205ENST00000431183 CNOT6LQ96LI5 555 aaKnown RBP12.49□□□□□ -0.41
SMPD4-205ENST00000431183 TCHPQ9BT92 498 aa12.49□□□□□ -0.41
SMPD4-205ENST00000431183 KCNMB3Q9NPA1 279 aa12.49□□□□□ -0.41
SMPD4-205ENST00000431183 KBTBD4Q9NVX7 518 aa12.49□□□□□ -0.41
SMPD4-205ENST00000431183 BTBD19C9JJ37 291 aa12.48□□□□□ -0.41
SMPD4-205ENST00000431183 GGPS1O95749 300 aa12.48□□□□□ -0.41
SMPD4-205ENST00000431183 USP8P40818 1118 aa12.48□□□□□ -0.41
SMPD4-205ENST00000431183 TAF1CQ15572 869 aaPredicted RBP12.48□□□□□ -0.41
SMPD4-205ENST00000431183 PADI6Q6TGC4 694 aa12.48□□□□□ -0.41
SMPD4-205ENST00000431183 ZIC5Q96T25 663 aa12.48□□□□□ -0.41
SMPD4-205ENST00000431183 IGLV3-22A0A075B6J6 115 aa12.48□□□□□ -0.41
SMPD4-205ENST00000431183 USP27XA6NNY8 438 aa12.48□□□□□ -0.41
SMPD4-205ENST00000431183 STXBP2Q15833 593 aa12.48□□□□□ -0.41
SMPD4-205ENST00000431183 P2RX5Q93086 422 aa12.48□□□□□ -0.41
SMPD4-205ENST00000431183 FAM20AQ96MK3 541 aa12.48□□□□□ -0.41
SMPD4-205ENST00000431183 TSG101Q99816 390 aa12.48□□□□□ -0.41
SMPD4-205ENST00000431183 LZTFL1Q9NQ48 299 aa12.48□□□□□ -0.41
SMPD4-205ENST00000431183 TRPC6Q9Y210 931 aa12.48□□□□□ -0.41
SMPD4-205ENST00000431183 TPM1P09493 284 aa12.48□□□□□ -0.41
SMPD4-205ENST00000431183 CASP14P31944 242 aa12.48□□□□□ -0.41
SMPD4-205ENST00000431183 OSTNP61366 133 aa12.48□□□□□ -0.41
SMPD4-205ENST00000431183 GNPTABQ3T906 1256 aa12.48□□□□□ -0.41
SMPD4-205ENST00000431183 SEZ6Q53EL9 994 aa12.48□□□□□ -0.41
SMPD4-205ENST00000431183 PYM1Q9BRP8 204 aaKnown RBP12.48□□□□□ -0.41
SMPD4-205ENST00000431183 TFR2Q9UP52 801 aa12.48□□□□□ -0.41
SMPD4-205ENST00000431183 LRRIQ4A6NIV6 560 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 CBFA2T2O43439 604 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 SRGAP2CP0DJJ0 459 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 GTF2F1P35269 517 aaKnown RBP eCLIP12.47□□□□□ -0.417e-8■■□□□ 11.7
SMPD4-205ENST00000431183 TMEM62Q0P6H9 643 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 ADAM9Q13443 819 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 PDIA5Q14554 519 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 MTF1Q14872 753 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 TSR1Q2NL82 804 aaKnown RBP12.47□□□□□ -0.41
SMPD4-205ENST00000431183 LRRC71Q8N4P6 559 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 SEPT11Q9NVA2 429 aaKnown RBP12.47□□□□□ -0.41
SMPD4-205ENST00000431183 TSKSQ9UJT2 592 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 CAVIN2O95810 425 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 CCNE2O96020 404 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 GJB1P08034 283 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 NR2F2P24468 414 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 SARSP49591 514 aaKnown RBP12.47□□□□□ -0.41
SMPD4-205ENST00000431183 PPATQ06203 517 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 TUBGCP2Q9BSJ2 902 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 RBPJLQ9UBG7 517 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 QSER1Q2KHR3 1735 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 LAMB1P07942 1786 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 KDM3AQ9Y4C1 1321 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 KLRC4O43908 158 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 HIP1RO75146 1068 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 SP2Q02086 613 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.47□□□□□ -0.41
SMPD4-205ENST00000431183 ZNF112Q9UJU3 913 aa12.47□□□□□ -0.41
SMPD4-205ENST00000431183 V9GYY5 206 aaPredicted RBP12.47□□□□□ -0.41
SMPD4-205ENST00000431183 SPDYE5A6NIY4 337 aa12.46□□□□□ -0.41
SMPD4-205ENST00000431183 RPA1P27694 616 aa12.46□□□□□ -0.41
SMPD4-205ENST00000431183 YWHABP31946 246 aaKnown RBP12.46□□□□□ -0.41
SMPD4-205ENST00000431183 NAP1L1P55209 391 aaKnown RBP12.46□□□□□ -0.41
SMPD4-205ENST00000431183 RBL2Q08999 1139 aa12.46□□□□□ -0.41
SMPD4-205ENST00000431183 SYCP1Q15431 976 aa12.46□□□□□ -0.41
SMPD4-205ENST00000431183 SH3RF1Q7Z6J0 888 aa12.46□□□□□ -0.41
SMPD4-205ENST00000431183 ENOX1Q8TC92 643 aaKnown RBP12.46□□□□□ -0.41
SMPD4-205ENST00000431183 BRI3BPQ8WY22 251 aa12.46□□□□□ -0.41
SMPD4-205ENST00000431183 SEMA6BQ9H3T3 888 aa12.46□□□□□ -0.41
SMPD4-205ENST00000431183 JPH1Q9HDC5 661 aaPredicted RBP12.46□□□□□ -0.41
SMPD4-205ENST00000431183 COPB1P53618 953 aaKnown RBP12.46□□□□□ -0.42
SMPD4-205ENST00000431183 ARSHQ5FYA8 562 aa12.46□□□□□ -0.42
SMPD4-205ENST00000431183 LMBRD2Q68DH5 695 aaPredicted RBP12.46□□□□□ -0.42
SMPD4-205ENST00000431183 CYP4F22Q6NT55 531 aa12.46□□□□□ -0.42
SMPD4-205ENST00000431183 RINT1Q6NUQ1 792 aa12.46□□□□□ -0.42
SMPD4-205ENST00000431183 UNC13DQ70J99 1090 aa12.46□□□□□ -0.42
SMPD4-205ENST00000431183 CACNA2D4Q7Z3S7 1137 aa12.46□□□□□ -0.42
SMPD4-205ENST00000431183 ADSSL1Q8N142 457 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms