RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 PLA2G4CQ9UP65 541 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 K7ELQ4 463 aaPredicted RBP4.89□□□□□ -1.63
LRRK2-204ENST00000430804 SPTLC2O15270 562 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 HSPA6P17066 643 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 NASPP49321 788 aaPredicted RBP4.89□□□□□ -1.63
LRRK2-204ENST00000430804 NMIQ13287 307 aaPredicted RBP4.89□□□□□ -1.63
LRRK2-204ENST00000430804 MTMR1Q13613 665 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 TMEM132DQ14C87 1099 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 RPS6KA2Q15349 733 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 TMED2Q15363 201 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 TMEM164Q5U3C3 297 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 NEK8Q86SG6 692 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 SMC5Q8IY18 1101 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 TRIM11Q96F44 468 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 PPP1R16BQ96T49 567 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 GLIS2Q9BZE0 524 aaPredicted RBP4.89□□□□□ -1.63
LRRK2-204ENST00000430804 EXO5Q9H790 373 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 METTL14Q9HCE5 456 aaKnown RBP4.89□□□□□ -1.63
LRRK2-204ENST00000430804 SAE1Q9UBE0 346 aaPredicted RBP4.89□□□□□ -1.63
LRRK2-204ENST00000430804 LAD1O00515 517 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 TACC1O75410 805 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 FOSL2P15408 326 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 SDHBP21912 280 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 EFNA5P52803 228 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 EVCP57679 992 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 EIF4A1P60842 406 aaKnown RBP4.89□□□□□ -1.63
LRRK2-204ENST00000430804 RASSF7Q02833 373 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 TTC38Q5R3I4 469 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 TMTC4Q5T4D3 741 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 PRR23BQ6ZRT6 265 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 TMTC1Q8IUR5 882 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 SPATA18Q8TC71 538 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 MRFAP1L1Q96HT8 127 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 USP26Q9BXU7 913 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 MAGEB5Q9BZ81 275 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 OLA1Q9NTK5 396 aaKnown RBP4.89□□□□□ -1.63
LRRK2-204ENST00000430804 RAB20Q9NX57 234 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 FEZ2Q9UHY8 353 aaPredicted RBP4.89□□□□□ -1.63
LRRK2-204ENST00000430804 BAG5Q9UL15 447 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 RBM8AQ9Y5S9 174 aaKnown RBP4.89□□□□□ -1.63
LRRK2-204ENST00000430804 TMEM265A0A087WTH1 108 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 NEURL1BA8MQ27 555 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 ESRRBO95718 433 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 OCM2P0CE71 109 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 OCMP0CE72 109 aaPredicted RBP4.89□□□□□ -1.63
LRRK2-204ENST00000430804 ABCB4P21439 1286 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 PSMA3P25788 255 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 PCSK1P29120 753 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 SOX5P35711 763 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 GRIK1P39086 918 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 SKP1P63208 163 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 PTK2Q05397 1052 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 DCAF4L1Q3SXM0 396 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 SPECC1LQ69YQ0 1117 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 FERMT3Q86UX7 667 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 GPBP1Q86WP2 473 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 GPR20Q99678 358 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 NDEL1Q9GZM8 345 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 TLE6Q9H808 572 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 ATG3Q9NT62 314 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 SEPT10Q9P0V9 454 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 SERPINA10Q9UK55 444 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 FBXO10Q9UK96 956 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 CD4P01730 458 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 ALDH2P05091 517 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 CDC37Q16543 378 aaPredicted RBP4.89□□□□□ -1.63
LRRK2-204ENST00000430804 ZNF667Q5HYK9 610 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 Q6ZUG5 572 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 EFCAB3Q8N7B9 438 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 CDCA5Q96FF9 252 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 PGBD1Q96JS3 809 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 ZNF558Q96NG5 402 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 EIF3CQ99613 913 aaKnown RBP4.89□□□□□ -1.63
LRRK2-204ENST00000430804 SEPT5Q99719 369 aaPredicted RBP4.89□□□□□ -1.63
LRRK2-204ENST00000430804 HAUS8Q9BT25 410 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 INTS2Q9H0H0 1204 aaKnown RBP4.89□□□□□ -1.63
LRRK2-204ENST00000430804 C11orf49Q9H6J7 331 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 DDX56Q9NY93 547 aaKnown RBP4.89□□□□□ -1.63
LRRK2-204ENST00000430804 SELENONQ9NZV5 590 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 UXTQ9UBK9 157 aaPredicted RBP4.89□□□□□ -1.63
LRRK2-204ENST00000430804 STAP1Q9ULZ2 295 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.89□□□□□ -1.63
LRRK2-204ENST00000430804 METP08581 1390 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 RPAP1Q9BWH6 1393 aaPredicted RBP4.89□□□□□ -1.63
LRRK2-204ENST00000430804 ATP7BP35670 1465 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 IQSEC2Q5JU85 1478 aa4.89□□□□□ -1.63
LRRK2-204ENST00000430804 EMSYQ7Z589 1322 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 EIF2AK4Q9P2K8 1649 aaKnown RBP4.88□□□□□ -1.63
LRRK2-204ENST00000430804 MLYCDO95822 493 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 DLATP10515 647 aaKnown RBP4.88□□□□□ -1.63
LRRK2-204ENST00000430804 SGCGQ13326 291 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 ZNF827Q17R98 1081 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 BROXQ5VW32 411 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 TDRD10Q5VZ19 366 aaKnown RBP4.88□□□□□ -1.63
LRRK2-204ENST00000430804 COL23A1Q86Y22 540 aaPredicted RBP4.88□□□□□ -1.63
LRRK2-204ENST00000430804 IFT43Q96FT9 208 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 ZSWIM4Q9H7M6 989 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 CWC15Q9P013 229 aaKnown RBP4.88□□□□□ -1.63
LRRK2-204ENST00000430804 KIF21AQ7Z4S6 1674 aa4.88□□□□□ -1.63
LRRK2-204ENST00000430804 IGSF9BQ9UPX0 1349 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms