RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 VAT1LQ9HCJ6 419 aa9.36□□□□□ -0.91
CSTF1-203ENST00000428552 PCDHB15Q9Y5E8 787 aa9.36□□□□□ -0.91
CSTF1-203ENST00000428552 MBLAC1A4D2B0 266 aaPredicted RBP9.35□□□□□ -0.91
CSTF1-203ENST00000428552 GALR2O43603 387 aaPredicted RBP9.35□□□□□ -0.91
CSTF1-203ENST00000428552 KDM4AO75164 1064 aa9.35□□□□□ -0.91
CSTF1-203ENST00000428552 ARP10275 920 aa9.35□□□□□ -0.91
CSTF1-203ENST00000428552 CCND2P30279 289 aa9.35□□□□□ -0.91
CSTF1-203ENST00000428552 NBL1P41271 181 aa9.35□□□□□ -0.91
CSTF1-203ENST00000428552 NMIQ13287 307 aaPredicted RBP9.35□□□□□ -0.91
CSTF1-203ENST00000428552 NAALADL2Q58DX5 795 aa9.35□□□□□ -0.91
CSTF1-203ENST00000428552 CMTR2Q8IYT2 770 aaKnown RBP9.35□□□□□ -0.91
CSTF1-203ENST00000428552 TMEM105Q8N8V8 129 aa9.35□□□□□ -0.91
CSTF1-203ENST00000428552 ESR2Q92731 530 aa9.35□□□□□ -0.91
CSTF1-203ENST00000428552 EVI5LQ96CN4 794 aa9.35□□□□□ -0.91
CSTF1-203ENST00000428552 ZBTB10Q96DT7 871 aa9.35□□□□□ -0.91
CSTF1-203ENST00000428552 RIPOR3Q96MK2 946 aa9.35□□□□□ -0.91
CSTF1-203ENST00000428552 MAP3K20Q9NYL2 800 aaKnown RBP9.35□□□□□ -0.91
CSTF1-203ENST00000428552 DMXL1Q9Y485 3027 aa9.34□□□□□ -0.91
CSTF1-203ENST00000428552 WDR87Q6ZQQ6 2873 aa9.34□□□□□ -0.91
CSTF1-203ENST00000428552 NRCAMQ92823 1304 aa9.34□□□□□ -0.91
CSTF1-203ENST00000428552 PER2O15055 1255 aa9.34□□□□□ -0.91
CSTF1-203ENST00000428552 ZBTB5O15062 677 aa9.34□□□□□ -0.91
CSTF1-203ENST00000428552 PARP1P09874 1014 aaKnown RBP9.34□□□□□ -0.91
CSTF1-203ENST00000428552 GNAT1P11488 350 aa9.34□□□□□ -0.91
CSTF1-203ENST00000428552 CD52P31358 61 aa9.34□□□□□ -0.91
CSTF1-203ENST00000428552 NUBP1P53384 320 aa9.34□□□□□ -0.91
CSTF1-203ENST00000428552 PAN2Q504Q3 1202 aaKnown RBP9.34□□□□□ -0.91
CSTF1-203ENST00000428552 SYCE2Q6PIF2 218 aa9.34□□□□□ -0.91
CSTF1-203ENST00000428552 TSHZ1Q6ZSZ6 1077 aa9.34□□□□□ -0.91
CSTF1-203ENST00000428552 ZSCAN10Q96SZ4 725 aaPredicted RBP9.34□□□□□ -0.91
CSTF1-203ENST00000428552 IRF2BPLQ9H1B7 796 aa9.34□□□□□ -0.91
CSTF1-203ENST00000428552 TMX1Q9H3N1 280 aa9.34□□□□□ -0.91
CSTF1-203ENST00000428552 SMOC2Q9H3U7 446 aa9.34□□□□□ -0.91
CSTF1-203ENST00000428552 KAT14Q9H8E8 782 aa9.34□□□□□ -0.91
CSTF1-203ENST00000428552 HCSTQ9UBK5 93 aa9.34□□□□□ -0.91
CSTF1-203ENST00000428552 MAD2L2Q9UI95 211 aa9.34□□□□□ -0.91
CSTF1-203ENST00000428552 CDH22Q9UJ99 828 aa9.34□□□□□ -0.91
CSTF1-203ENST00000428552 TRPC6Q9Y210 931 aa9.34□□□□□ -0.91
CSTF1-203ENST00000428552 PCDHA1Q9Y5I3 950 aa9.34□□□□□ -0.91
CSTF1-203ENST00000428552 CDY2AQ9Y6F7 541 aa9.34□□□□□ -0.91
CSTF1-203ENST00000428552 ZNF292O60281 2723 aa9.33□□□□□ -0.92
CSTF1-203ENST00000428552 ZFHX4Q86UP3 3567 aa9.33□□□□□ -0.92
CSTF1-203ENST00000428552 PALM3A6NDB9 673 aaPredicted RBP9.33□□□□□ -0.92
CSTF1-203ENST00000428552 B4E1Z4 1266 aa9.33□□□□□ -0.92
CSTF1-203ENST00000428552 NOP56O00567 594 aaKnown RBP9.33□□□□□ -0.92
CSTF1-203ENST00000428552 FSCN2O14926 492 aa9.33□□□□□ -0.92
CSTF1-203ENST00000428552 DHX16O60231 1041 aaKnown RBP9.33□□□□□ -0.92
CSTF1-203ENST00000428552 ERVFC1P60507 584 aa9.33□□□□□ -0.92
CSTF1-203ENST00000428552 NEDD9Q14511 834 aa9.33□□□□□ -0.92
CSTF1-203ENST00000428552 DUSP6Q16828 381 aa9.33□□□□□ -0.92
CSTF1-203ENST00000428552 UTP14CQ5TAP6 766 aaKnown RBP9.33□□□□□ -0.92
CSTF1-203ENST00000428552 TAF2Q6P1X5 1199 aa9.33□□□□□ -0.92
CSTF1-203ENST00000428552 TMEM184AQ6ZMB5 413 aa9.33□□□□□ -0.92
CSTF1-203ENST00000428552 ERMP1Q7Z2K6 904 aa9.33□□□□□ -0.92
CSTF1-203ENST00000428552 FCHSD1Q86WN1 690 aa9.33□□□□□ -0.92
CSTF1-203ENST00000428552 NPAS4Q8IUM7 802 aa9.33□□□□□ -0.92
CSTF1-203ENST00000428552 SAMD3Q8N6K7 520 aa9.33□□□□□ -0.92
CSTF1-203ENST00000428552 DNAJB3Q8WWF6 145 aa9.33□□□□□ -0.92
CSTF1-203ENST00000428552 PPP2R3CQ969Q6 453 aa9.33□□□□□ -0.92
CSTF1-203ENST00000428552 ZMYND15Q9H091 742 aa9.33□□□□□ -0.92
CSTF1-203ENST00000428552 RNF41Q9H4P4 317 aaPredicted RBP9.33□□□□□ -0.92
CSTF1-203ENST00000428552 TLE6Q9H808 572 aa9.33□□□□□ -0.92
CSTF1-203ENST00000428552 RTEL1Q9NZ71 1219 aa9.33□□□□□ -0.92
CSTF1-203ENST00000428552 ZSWIM5Q9P217 1185 aa9.33□□□□□ -0.92
CSTF1-203ENST00000428552 RCAN3Q9UKA8 241 aa9.33□□□□□ -0.92
CSTF1-203ENST00000428552 GVINP1Q7Z2Y8 2422 aa9.33□□□□□ -0.92
CSTF1-203ENST00000428552 RIF1Q5UIP0 2472 aaKnown RBP9.32□□□□□ -0.92
CSTF1-203ENST00000428552 GSTTP1A0A1W2PQM5 241 aa9.32□□□□□ -0.92
CSTF1-203ENST00000428552 KLRF2D3W0D1 207 aa9.32□□□□□ -0.92
CSTF1-203ENST00000428552 GCOM1H8Y6P7 765 aaPredicted RBP9.32□□□□□ -0.92
CSTF1-203ENST00000428552 FIBPO43427 364 aa9.32□□□□□ -0.92
CSTF1-203ENST00000428552 CYTH3O43739 400 aa9.32□□□□□ -0.92
CSTF1-203ENST00000428552 BRD1O95696 1058 aa9.32□□□□□ -0.92
CSTF1-203ENST00000428552 HMGB1P09429 215 aaKnown RBP9.32□□□□□ -0.92
CSTF1-203ENST00000428552 POLR2MP0CAP2 368 aa9.32□□□□□ -0.92
CSTF1-203ENST00000428552 PDE1AP54750 535 aa9.32□□□□□ -0.92
CSTF1-203ENST00000428552 MRPS6P82932 125 aaKnown RBP9.32□□□□□ -0.92
CSTF1-203ENST00000428552 SP4Q02446 784 aa9.32□□□□□ -0.92
CSTF1-203ENST00000428552 SEC23AQ15436 765 aa9.32□□□□□ -0.92
CSTF1-203ENST00000428552 GRIK4Q16099 956 aa9.32□□□□□ -0.92
CSTF1-203ENST00000428552 FRMD5Q7Z6J6 570 aa9.32□□□□□ -0.92
CSTF1-203ENST00000428552 IQCA1Q86XH1 822 aa9.32□□□□□ -0.92
CSTF1-203ENST00000428552 KREMEN2Q8NCW0 462 aa9.32□□□□□ -0.92
CSTF1-203ENST00000428552 PIGSQ96S52 555 aa9.32□□□□□ -0.92
CSTF1-203ENST00000428552 SENP7Q9BQF6 1050 aa9.32□□□□□ -0.92
CSTF1-203ENST00000428552 RIOX1Q9H6W3 641 aa9.32□□□□□ -0.92
CSTF1-203ENST00000428552 TUBE1Q9UJT0 475 aa9.32□□□□□ -0.92
CSTF1-203ENST00000428552 ZNF215Q9UL58 517 aaPredicted RBP9.32□□□□□ -0.92
CSTF1-203ENST00000428552 PADI3Q9ULW8 664 aa9.32□□□□□ -0.92
CSTF1-203ENST00000428552 PTPRZ1P23471 2315 aaPredicted RBP9.32□□□□□ -0.92
CSTF1-203ENST00000428552 FNDC1Q4ZHG4 1894 aaPredicted RBP9.32□□□□□ -0.92
CSTF1-203ENST00000428552 FAM186AA6NE01 2351 aa9.31□□□□□ -0.92
CSTF1-203ENST00000428552 TRIM6-TRIM34B2RNG4 842 aa9.31□□□□□ -0.92
CSTF1-203ENST00000428552 ZNF213O14771 459 aa9.31□□□□□ -0.92
CSTF1-203ENST00000428552 MGEA5O60502 916 aa9.31□□□□□ -0.92
CSTF1-203ENST00000428552 ATP9AO75110 1047 aa9.31□□□□□ -0.92
CSTF1-203ENST00000428552 PPFIA3O75145 1194 aa9.31□□□□□ -0.92
CSTF1-203ENST00000428552 STAM2O75886 525 aa9.31□□□□□ -0.92
CSTF1-203ENST00000428552 SCG2P13521 617 aa9.31□□□□□ -0.92
CSTF1-203ENST00000428552 KCNA2P16389 499 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms