RNA–Protein interactions for RNA: ENST00000428534.1

GLI3-202, Transcript of GLI family zinc finger 3, humanhuman

TSL 4

Gene GLI3, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI3-202ENST00000428534 MIER3Q7Z3K6 550 aa26.43■■□□□ 1.82
GLI3-202ENST00000428534 CCDC155Q8N6L0 562 aa26.43■■□□□ 1.82
GLI3-202ENST00000428534 PRDM5Q9NQX1 630 aaPredicted RBP26.43■■□□□ 1.82
GLI3-202ENST00000428534 PDLIM7Q9NR12 457 aa26.43■■□□□ 1.82
GLI3-202ENST00000428534 FOXD4L1Q9NU39 408 aa26.43■■□□□ 1.82
GLI3-202ENST00000428534 PCDHA12Q9UN75 941 aa26.43■■□□□ 1.82
GLI3-202ENST00000428534 LAMA2P24043 3122 aaKnown RBP26.43■■□□□ 1.82
GLI3-202ENST00000428534 C17orf102A2RUQ5 167 aa26.42■■□□□ 1.82
GLI3-202ENST00000428534 LAD1O00515 517 aa26.42■■□□□ 1.82
GLI3-202ENST00000428534 B4GALT4O60513 344 aa26.42■■□□□ 1.82
GLI3-202ENST00000428534 PTGISQ16647 500 aa26.42■■□□□ 1.82
GLI3-202ENST00000428534 SWSAP1Q6NVH7 229 aa26.42■■□□□ 1.82
GLI3-202ENST00000428534 UIMC1Q96RL1 719 aa26.42■■□□□ 1.82
GLI3-202ENST00000428534 LBHD1Q9BQE6 289 aaPredicted RBP26.42■■□□□ 1.82
GLI3-202ENST00000428534 UNC45AQ9H3U1 944 aa26.42■■□□□ 1.82
GLI3-202ENST00000428534 RRN3P2A6NIE6 340 aa26.41■■□□□ 1.82
GLI3-202ENST00000428534 SMIM10L2AP0DMW4 78 aa26.41■■□□□ 1.82
GLI3-202ENST00000428534 SMIM10L2BP0DMW5 78 aa26.41■■□□□ 1.82
GLI3-202ENST00000428534 RAG1P15918 1043 aa26.41■■□□□ 1.82
GLI3-202ENST00000428534 BMP8BP34820 402 aa26.41■■□□□ 1.82
GLI3-202ENST00000428534 PDXDC2PQ6P474 469 aa26.41■■□□□ 1.82
GLI3-202ENST00000428534 B3GNT9Q6UX72 402 aa26.41■■□□□ 1.82
GLI3-202ENST00000428534 TRIM50Q86XT4 487 aa26.41■■□□□ 1.82
GLI3-202ENST00000428534 HAS1Q92839 578 aa26.41■■□□□ 1.82
GLI3-202ENST00000428534 ATP6V0A1Q93050 837 aa26.41■■□□□ 1.82
GLI3-202ENST00000428534 FAM167AQ96KS9 214 aa26.41■■□□□ 1.82
GLI3-202ENST00000428534 TELO2Q9Y4R8 837 aa26.41■■□□□ 1.82
GLI3-202ENST00000428534 MAFBQ9Y5Q3 323 aaPredicted RBP26.41■■□□□ 1.82
GLI3-202ENST00000428534 DOCK5Q9H7D0 1870 aa26.4■■□□□ 1.82
GLI3-202ENST00000428534 CHMP2AO43633 222 aa26.4■■□□□ 1.82
GLI3-202ENST00000428534 STX6O43752 255 aa26.4■■□□□ 1.82
GLI3-202ENST00000428534 ZNF174Q15697 407 aa26.4■■□□□ 1.82
GLI3-202ENST00000428534 MTMR9Q96QG7 549 aa26.4■■□□□ 1.82
GLI3-202ENST00000428534 PCYT2Q99447 389 aa26.4■■□□□ 1.82
GLI3-202ENST00000428534 TRPV6Q9H1D0 765 aa26.4■■□□□ 1.82
GLI3-202ENST00000428534 ZSCAN16Q9H4T2 348 aaPredicted RBP26.4■■□□□ 1.82
GLI3-202ENST00000428534 TBX21Q9UL17 535 aa26.4■■□□□ 1.82
GLI3-202ENST00000428534 POTEB3A0JP26 581 aa26.39■■□□□ 1.82
GLI3-202ENST00000428534 HBP1O60381 514 aa26.39■■□□□ 1.82
GLI3-202ENST00000428534 TIMP1P01033 207 aa26.39■■□□□ 1.82
GLI3-202ENST00000428534 RPLP2P05387 115 aaKnown RBP26.39■■□□□ 1.82
GLI3-202ENST00000428534 MAGEA10P43363 369 aaPredicted RBP26.39■■□□□ 1.82
GLI3-202ENST00000428534 BFSP2Q13515 415 aa26.39■■□□□ 1.82
GLI3-202ENST00000428534 TMEM266Q2M3C6 531 aa26.39■■□□□ 1.82
GLI3-202ENST00000428534 GDF6Q6KF10 455 aaPredicted RBP26.39■■□□□ 1.82
GLI3-202ENST00000428534 POTEBQ6S5H4 581 aa26.39■■□□□ 1.82
GLI3-202ENST00000428534 CCDC60Q8IWA6 550 aaPredicted RBP26.39■■□□□ 1.82
GLI3-202ENST00000428534 CKAP2LQ8IYA6 745 aa26.39■■□□□ 1.82
GLI3-202ENST00000428534 CAGE1Q8TC20 777 aa26.39■■□□□ 1.82
GLI3-202ENST00000428534 RNPEPQ9H4A4 650 aa26.39■■□□□ 1.82
GLI3-202ENST00000428534 TTC12Q9H892 705 aaPredicted RBP26.39■■□□□ 1.82
GLI3-202ENST00000428534 NRBP2Q9NSY0 501 aa26.39■■□□□ 1.82
GLI3-202ENST00000428534 TRMT13Q9NUP7 481 aaKnown RBP26.39■■□□□ 1.82
GLI3-202ENST00000428534 GABBR1Q9UBS5 961 aa26.39■■□□□ 1.82
GLI3-202ENST00000428534 TRPC6Q9Y210 931 aa26.39■■□□□ 1.82
GLI3-202ENST00000428534 BMP15O95972 392 aa26.38■■□□□ 1.81
GLI3-202ENST00000428534 OR52Z1P0C646 297 aa26.38■■□□□ 1.81
GLI3-202ENST00000428534 HOXC8P31273 242 aa26.38■■□□□ 1.81
GLI3-202ENST00000428534 TXKP42681 527 aa26.38■■□□□ 1.81
GLI3-202ENST00000428534 PPFIA1Q13136 1202 aa26.38■■□□□ 1.81
GLI3-202ENST00000428534 PTK7Q13308 1070 aa26.38■■□□□ 1.81
GLI3-202ENST00000428534 ATP8B4Q8TF62 1192 aa26.38■■□□□ 1.81
GLI3-202ENST00000428534 BBXQ8WY36 941 aaPredicted RBP26.38■■□□□ 1.81
GLI3-202ENST00000428534 RAB34Q9BZG1 259 aa26.38■■□□□ 1.81
GLI3-202ENST00000428534 VAV3Q9UKW4 847 aa26.38■■□□□ 1.81
GLI3-202ENST00000428534 CEP131Q9UPN4 1083 aa26.38■■□□□ 1.81
GLI3-202ENST00000428534 STK24Q9Y6E0 443 aa26.38■■□□□ 1.81
GLI3-202ENST00000428534 A0A0C4DFX4 3053 aa26.37■■□□□ 1.81
GLI3-202ENST00000428534 MARK3P27448 753 aa26.37■■□□□ 1.81
GLI3-202ENST00000428534 PLCB4Q15147 1175 aa26.37■■□□□ 1.81
GLI3-202ENST00000428534 EPHA7Q15375 998 aa26.37■■□□□ 1.81
GLI3-202ENST00000428534 RETREG2Q8NC44 543 aa26.37■■□□□ 1.81
GLI3-202ENST00000428534 NEK9Q8TD19 979 aa26.37■■□□□ 1.81
GLI3-202ENST00000428534 GJA10Q969M2 543 aa26.37■■□□□ 1.81
GLI3-202ENST00000428534 HIPK3Q9H422 1215 aa26.37■■□□□ 1.81
GLI3-202ENST00000428534 COL1A2P08123 1366 aa26.36■■□□□ 1.81
GLI3-202ENST00000428534 TRIM43BA6NCK2 446 aa26.36■■□□□ 1.81
GLI3-202ENST00000428534 PITPNM1O00562 1244 aa26.36■■□□□ 1.81
GLI3-202ENST00000428534 P4HBP07237 508 aaKnown RBP26.36■■□□□ 1.81
GLI3-202ENST00000428534 TOB1P50616 345 aaPredicted RBP26.36■■□□□ 1.81
GLI3-202ENST00000428534 ZNF484Q5JVG2 852 aa26.36■■□□□ 1.81
GLI3-202ENST00000428534 TMEM199Q8N511 208 aa26.36■■□□□ 1.81
GLI3-202ENST00000428534 TRIM43Q96BQ3 446 aaPredicted RBP26.36■■□□□ 1.81
GLI3-202ENST00000428534 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.36■■□□□ 1.81
GLI3-202ENST00000428534 SETD4Q9NVD3 440 aa26.36■■□□□ 1.81
GLI3-202ENST00000428534 IGSF9BQ9UPX0 1349 aa26.36■■□□□ 1.81
GLI3-202ENST00000428534 WNT7AO00755 349 aa26.35■■□□□ 1.81
GLI3-202ENST00000428534 PARNO95453 639 aaKnown RBP26.35■■□□□ 1.81
GLI3-202ENST00000428534 PRPHP41219 470 aa26.35■■□□□ 1.81
GLI3-202ENST00000428534 PSMC5P62195 406 aa26.35■■□□□ 1.81
GLI3-202ENST00000428534 GRIK4Q16099 956 aa26.35■■□□□ 1.81
GLI3-202ENST00000428534 NCAPH2Q6IBW4 605 aa26.35■■□□□ 1.81
GLI3-202ENST00000428534 TAF2Q6P1X5 1199 aa26.35■■□□□ 1.81
GLI3-202ENST00000428534 SH3RF1Q7Z6J0 888 aa26.35■■□□□ 1.81
GLI3-202ENST00000428534 MTMR6Q9Y217 621 aa26.35■■□□□ 1.81
GLI3-202ENST00000428534 PCDHB6Q9Y5E3 794 aa26.35■■□□□ 1.81
GLI3-202ENST00000428534 CAND2O75155 1236 aa26.34■■□□□ 1.81
GLI3-202ENST00000428534 INSRRP14616 1297 aa26.34■■□□□ 1.81
GLI3-202ENST00000428534 QARSP47897 775 aaKnown RBP26.34■■□□□ 1.81
GLI3-202ENST00000428534 PTGDRQ13258 359 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms