RNA–Protein interactions for RNA: ENST00000428130.6

RDH11-202, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2 BASIC

Gene RDH11, Length 1,064 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-202ENST00000428130 CYFIP1Q7L576 1253 aa11.94□□□□□ -0.5
RDH11-202ENST00000428130 ASCL5Q7RTU5 278 aa11.94□□□□□ -0.5
RDH11-202ENST00000428130 RBM23Q86U06 439 aaKnown RBP11.94□□□□□ -0.5
RDH11-202ENST00000428130 IQCA1Q86XH1 822 aa11.94□□□□□ -0.5
RDH11-202ENST00000428130 STAG2Q8N3U4 1231 aa11.94□□□□□ -0.5
RDH11-202ENST00000428130 ENAHQ8N8S7 591 aaPredicted RBP11.94□□□□□ -0.5
RDH11-202ENST00000428130 SUSD6Q92537 303 aa11.94□□□□□ -0.5
RDH11-202ENST00000428130 RCAN3Q9UKA8 241 aa11.94□□□□□ -0.5
RDH11-202ENST00000428130 ZNF215Q9UL58 517 aaPredicted RBP11.94□□□□□ -0.5
RDH11-202ENST00000428130 PCDHGC5Q9Y5F6 944 aa11.94□□□□□ -0.5
RDH11-202ENST00000428130 FRMPD4Q14CM0 1322 aa11.93□□□□□ -0.5
RDH11-202ENST00000428130 PRR23AA6NEV1 266 aa11.93□□□□□ -0.5
RDH11-202ENST00000428130 TRIM6-TRIM34B2RNG4 842 aa11.93□□□□□ -0.5
RDH11-202ENST00000428130 SPATA31C2B4DYI2 1134 aa11.93□□□□□ -0.5
RDH11-202ENST00000428130 ZBTB5O15062 677 aa11.93□□□□□ -0.5
RDH11-202ENST00000428130 NUBP1P53384 320 aa11.93□□□□□ -0.5
RDH11-202ENST00000428130 RBM10P98175 930 aaKnown RBP11.93□□□□□ -0.5
RDH11-202ENST00000428130 NMIQ13287 307 aaPredicted RBP11.93□□□□□ -0.5
RDH11-202ENST00000428130 NEDD9Q14511 834 aa11.93□□□□□ -0.5
RDH11-202ENST00000428130 GNPTABQ3T906 1256 aa11.93□□□□□ -0.5
RDH11-202ENST00000428130 UTP14CQ5TAP6 766 aaKnown RBP11.93□□□□□ -0.5
RDH11-202ENST00000428130 TAF2Q6P1X5 1199 aa11.93□□□□□ -0.5
RDH11-202ENST00000428130 TSHZ1Q6ZSZ6 1077 aa11.93□□□□□ -0.5
RDH11-202ENST00000428130 ATP8B4Q8TF62 1192 aa11.93□□□□□ -0.5
RDH11-202ENST00000428130 INPP4AQ96PE3 977 aaPredicted RBP11.93□□□□□ -0.5
RDH11-202ENST00000428130 ZSCAN10Q96SZ4 725 aaPredicted RBP11.93□□□□□ -0.5
RDH11-202ENST00000428130 PCDHA1Q9Y5I3 950 aa11.93□□□□□ -0.5
RDH11-202ENST00000428130 B4E1Z4 1266 aa11.92□□□□□ -0.5
RDH11-202ENST00000428130 ZNF213O14771 459 aa11.92□□□□□ -0.5
RDH11-202ENST00000428130 GALR2O43603 387 aaPredicted RBP11.92□□□□□ -0.5
RDH11-202ENST00000428130 STAM2O75886 525 aa11.92□□□□□ -0.5
RDH11-202ENST00000428130 NBL1P41271 181 aa11.92□□□□□ -0.5
RDH11-202ENST00000428130 PAN2Q504Q3 1202 aaKnown RBP11.92□□□□□ -0.5
RDH11-202ENST00000428130 RTN4RL1Q86UN2 441 aaPredicted RBP11.92□□□□□ -0.5
RDH11-202ENST00000428130 FCHSD1Q86WN1 690 aa11.92□□□□□ -0.5
RDH11-202ENST00000428130 TICAM2Q86XR7 235 aa11.92□□□□□ -0.5
RDH11-202ENST00000428130 VN1R2Q8NFZ6 395 aa11.92□□□□□ -0.5
RDH11-202ENST00000428130 RIPOR3Q96MK2 946 aa11.92□□□□□ -0.5
RDH11-202ENST00000428130 TLE6Q9H808 572 aa11.92□□□□□ -0.5
RDH11-202ENST00000428130 AGO3Q9H9G7 860 aaKnown RBP11.92□□□□□ -0.5
RDH11-202ENST00000428130 PCDHB15Q9Y5E8 787 aa11.92□□□□□ -0.5
RDH11-202ENST00000428130 CDY2AQ9Y6F7 541 aa11.92□□□□□ -0.5
RDH11-202ENST00000428130 GVINP1Q7Z2Y8 2422 aa11.91□□□□□ -0.5
RDH11-202ENST00000428130 KLRF2D3W0D1 207 aa11.91□□□□□ -0.5
RDH11-202ENST00000428130 GCOM1H8Y6P7 765 aaPredicted RBP11.91□□□□□ -0.5
RDH11-202ENST00000428130 PER2O15055 1255 aa11.91□□□□□ -0.5
RDH11-202ENST00000428130 FIBPO43427 364 aa11.91□□□□□ -0.5
RDH11-202ENST00000428130 POLR2MP0CAP2 368 aa11.91□□□□□ -0.5
RDH11-202ENST00000428130 CD52P31358 61 aa11.91□□□□□ -0.5
RDH11-202ENST00000428130 ERMP1Q7Z2K6 904 aa11.91□□□□□ -0.5
RDH11-202ENST00000428130 RSPH3Q86UC2 560 aa11.91□□□□□ -0.5
RDH11-202ENST00000428130 NPAS4Q8IUM7 802 aa11.91□□□□□ -0.5
RDH11-202ENST00000428130 DNAJB3Q8WWF6 145 aa11.91□□□□□ -0.5
RDH11-202ENST00000428130 ZSWIM5Q9P217 1185 aa11.91□□□□□ -0.5
RDH11-202ENST00000428130 MAD2L2Q9UI95 211 aa11.91□□□□□ -0.5
RDH11-202ENST00000428130 TUBE1Q9UJT0 475 aa11.91□□□□□ -0.5
RDH11-202ENST00000428130 MBLAC1A4D2B0 266 aaPredicted RBP11.9□□□□□ -0.5
RDH11-202ENST00000428130 PPFIA3O75145 1194 aa11.9□□□□□ -0.5
RDH11-202ENST00000428130 GATMP50440 423 aa11.9□□□□□ -0.5
RDH11-202ENST00000428130 PDE1AP54750 535 aa11.9□□□□□ -0.5
RDH11-202ENST00000428130 MRPS6P82932 125 aaKnown RBP11.9□□□□□ -0.5
RDH11-202ENST00000428130 SP4Q02446 784 aa11.9□□□□□ -0.5
RDH11-202ENST00000428130 PPFIA1Q13136 1202 aa11.9□□□□□ -0.5
RDH11-202ENST00000428130 KCNC3Q14003 757 aa11.9□□□□□ -0.5
RDH11-202ENST00000428130 GRIK4Q16099 956 aa11.9□□□□□ -0.5
RDH11-202ENST00000428130 DUSP6Q16828 381 aa11.9□□□□□ -0.5
RDH11-202ENST00000428130 SLC35G1Q2M3R5 365 aa11.9□□□□□ -0.5
RDH11-202ENST00000428130 MARCH8Q5T0T0 291 aa11.9□□□□□ -0.5
RDH11-202ENST00000428130 HOMER1Q86YM7 354 aa11.9□□□□□ -0.5
RDH11-202ENST00000428130 EVPLQ92817 2033 aa11.9□□□□□ -0.5
RDH11-202ENST00000428130 NEK1Q96PY6 1258 aa11.9□□□□□ -0.5
RDH11-202ENST00000428130 SENP7Q9BQF6 1050 aa11.9□□□□□ -0.5
RDH11-202ENST00000428130 FTHL17Q9BXU8 183 aa11.9□□□□□ -0.5
RDH11-202ENST00000428130 RTEL1Q9NZ71 1219 aa11.9□□□□□ -0.5
RDH11-202ENST00000428130 TRPC6Q9Y210 931 aa11.9□□□□□ -0.5
RDH11-202ENST00000428130 DENND4AQ7Z401 1863 aa11.89□□□□□ -0.51
RDH11-202ENST00000428130 FSD2A1L4K1 749 aa11.89□□□□□ -0.51
RDH11-202ENST00000428130 PALM3A6NDB9 673 aaPredicted RBP11.89□□□□□ -0.51
RDH11-202ENST00000428130 STAG3L1P0CL83 205 aa11.89□□□□□ -0.51
RDH11-202ENST00000428130 SCG2P13521 617 aa11.89□□□□□ -0.51
RDH11-202ENST00000428130 TCF7P36402 384 aaPredicted RBP11.89□□□□□ -0.51
RDH11-202ENST00000428130 UBE3AQ05086 875 aa11.89□□□□□ -0.51
RDH11-202ENST00000428130 TMEM184AQ6ZMB5 413 aa11.89□□□□□ -0.51
RDH11-202ENST00000428130 TMEM105Q8N8V8 129 aa11.89□□□□□ -0.51
RDH11-202ENST00000428130 PIGSQ96S52 555 aa11.89□□□□□ -0.51
RDH11-202ENST00000428130 CDCA3Q99618 268 aaPredicted RBP11.89□□□□□ -0.51
RDH11-202ENST00000428130 S1PR5Q9H228 398 aa11.89□□□□□ -0.51
RDH11-202ENST00000428130 SQORQ9Y6N5 450 aa11.89□□□□□ -0.51
RDH11-202ENST00000428130 MFAP1P55081 439 aaKnown RBP11.88□□□□□ -0.51
RDH11-202ENST00000428130 ERVFC1P60507 584 aa11.88□□□□□ -0.51
RDH11-202ENST00000428130 TRAF1Q13077 416 aa11.88□□□□□ -0.51
RDH11-202ENST00000428130 SEC23AQ15436 765 aa11.88□□□□□ -0.51
RDH11-202ENST00000428130 IFIT1BQ5T764 474 aaKnown RBP11.88□□□□□ -0.51
RDH11-202ENST00000428130 ZBTB33Q86T24 672 aa11.88□□□□□ -0.51
RDH11-202ENST00000428130 MICAL1Q8TDZ2 1067 aa11.88□□□□□ -0.51
RDH11-202ENST00000428130 ZBTB10Q96DT7 871 aa11.88□□□□□ -0.51
RDH11-202ENST00000428130 RIOX1Q9H6W3 641 aa11.88□□□□□ -0.51
RDH11-202ENST00000428130 ERAP1Q9NZ08 941 aa11.88□□□□□ -0.51
RDH11-202ENST00000428130 PADI3Q9ULW8 664 aa11.88□□□□□ -0.51
RDH11-202ENST00000428130 IGSF9BQ9UPX0 1349 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms