RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 GLG1Q92896 1179 aa21.8■■□□□ 1.08
COL9A2-204ENST00000427563 SLKQ9H2G2 1235 aaPredicted RBP21.8■■□□□ 1.08
COL9A2-204ENST00000427563 GJB4Q9NTQ9 266 aa21.8■■□□□ 1.08
COL9A2-204ENST00000427563 PCDHA4Q9UN74 947 aa21.8■■□□□ 1.08
COL9A2-204ENST00000427563 MBLAC1A4D2B0 266 aaPredicted RBP21.79■■□□□ 1.08
COL9A2-204ENST00000427563 RSPH10B2B2RC85 870 aa21.79■■□□□ 1.08
COL9A2-204ENST00000427563 PARNO95453 639 aaKnown RBP21.79■■□□□ 1.08
COL9A2-204ENST00000427563 RSPH10BP0C881 870 aa21.79■■□□□ 1.08
COL9A2-204ENST00000427563 ACTN1P12814 892 aa21.79■■□□□ 1.08
COL9A2-204ENST00000427563 WDR5P61964 334 aaKnown RBP21.79■■□□□ 1.08
COL9A2-204ENST00000427563 DEFB103AP81534 67 aa21.79■■□□□ 1.08
COL9A2-204ENST00000427563 PPFIA1Q13136 1202 aa21.79■■□□□ 1.08
COL9A2-204ENST00000427563 PLCB4Q15147 1175 aa21.79■■□□□ 1.08
COL9A2-204ENST00000427563 RAB30Q15771 203 aa21.79■■□□□ 1.08
COL9A2-204ENST00000427563 GRIK4Q16099 956 aa21.79■■□□□ 1.08
COL9A2-204ENST00000427563 TMCO2Q7Z6W1 182 aaPredicted RBP21.79■■□□□ 1.08
COL9A2-204ENST00000427563 NECAB1Q8N987 351 aa21.79■■□□□ 1.08
COL9A2-204ENST00000427563 DAGLBQ8NCG7 672 aa21.79■■□□□ 1.08
COL9A2-204ENST00000427563 KCNJ14Q9UNX9 436 aa21.79■■□□□ 1.08
COL9A2-204ENST00000427563 STK36Q9NRP7 1315 aa21.79■■□□□ 1.08
COL9A2-204ENST00000427563 PRUNE2Q8WUY3 3088 aa21.78■■□□□ 1.08
COL9A2-204ENST00000427563 IPO5O00410 1097 aaKnown RBP21.78■■□□□ 1.08
COL9A2-204ENST00000427563 BAIAP3O94812 1187 aa21.78■■□□□ 1.08
COL9A2-204ENST00000427563 CTSHP09668 335 aa21.78■■□□□ 1.08
COL9A2-204ENST00000427563 GNAT1P11488 350 aa21.78■■□□□ 1.08
COL9A2-204ENST00000427563 FDPSP14324 419 aaKnown RBP21.78■■□□□ 1.08
COL9A2-204ENST00000427563 PRR16Q569H4 304 aa21.78■■□□□ 1.08
COL9A2-204ENST00000427563 CCDC60Q8IWA6 550 aaPredicted RBP21.78■■□□□ 1.08
COL9A2-204ENST00000427563 BLIDQ8IZY5 108 aa21.78■■□□□ 1.08
COL9A2-204ENST00000427563 ZNF577Q9BSK1 485 aa21.78■■□□□ 1.08
COL9A2-204ENST00000427563 LOXHD1Q8IVV2 1947 aa21.78■■□□□ 1.08
COL9A2-204ENST00000427563 MYH9P35579 1960 aaKnown RBP21.78■■□□□ 1.08
COL9A2-204ENST00000427563 INSRRP14616 1297 aa21.77■■□□□ 1.08
COL9A2-204ENST00000427563 ATP4AP20648 1035 aa21.77■■□□□ 1.08
COL9A2-204ENST00000427563 STAT5BP51692 787 aa21.77■■□□□ 1.08
COL9A2-204ENST00000427563 MGAT3Q09327 533 aa21.77■■□□□ 1.08
COL9A2-204ENST00000427563 FAM26DQ5JW98 314 aa21.77■■□□□ 1.08
COL9A2-204ENST00000427563 PLPPR4Q7Z2D5 763 aa21.77■■□□□ 1.08
COL9A2-204ENST00000427563 DBF4BQ8NFT6 615 aa21.77■■□□□ 1.08
COL9A2-204ENST00000427563 PHOSPHO2Q8TCD6 241 aa21.77■■□□□ 1.08
COL9A2-204ENST00000427563 TBCKQ8TEA7 893 aa21.77■■□□□ 1.08
COL9A2-204ENST00000427563 TRAPPC12Q8WVT3 735 aa21.77■■□□□ 1.08
COL9A2-204ENST00000427563 SLC9A7Q96T83 725 aa21.77■■□□□ 1.08
COL9A2-204ENST00000427563 PHF20Q9BVI0 1012 aa21.77■■□□□ 1.08
COL9A2-204ENST00000427563 MSRAQ9UJ68 235 aa21.77■■□□□ 1.08
COL9A2-204ENST00000427563 PCDHA11Q9Y5I1 949 aa21.77■■□□□ 1.08
COL9A2-204ENST00000427563 A0A0C4DFX4 3053 aa21.77■■□□□ 1.08
COL9A2-204ENST00000427563 MSH4O15457 936 aa21.76■■□□□ 1.07
COL9A2-204ENST00000427563 CAND2O75155 1236 aa21.76■■□□□ 1.07
COL9A2-204ENST00000427563 CHRNA1P02708 482 aa21.76■■□□□ 1.07
COL9A2-204ENST00000427563 NEK4P51957 841 aa21.76■■□□□ 1.07
COL9A2-204ENST00000427563 SETQ01105 290 aaPredicted RBP21.76■■□□□ 1.07
COL9A2-204ENST00000427563 PLEKHG4Q58EX7 1191 aa21.76■■□□□ 1.07
COL9A2-204ENST00000427563 CPLX2Q6PUV4 134 aaKnown RBP21.76■■□□□ 1.07
COL9A2-204ENST00000427563 RPAINQ86UA6 219 aa21.76■■□□□ 1.07
COL9A2-204ENST00000427563 HERC6Q8IVU3 1022 aa21.76■■□□□ 1.07
COL9A2-204ENST00000427563 GTF3C6Q969F1 213 aa21.76■■□□□ 1.07
COL9A2-204ENST00000427563 GJA10Q969M2 543 aa21.76■■□□□ 1.07
COL9A2-204ENST00000427563 KIF2CQ99661 725 aa21.76■■□□□ 1.07
COL9A2-204ENST00000427563 TUBE1Q9UJT0 475 aa21.76■■□□□ 1.07
COL9A2-204ENST00000427563 UNC80Q8N2C7 3258 aa21.75■■□□□ 1.07
COL9A2-204ENST00000427563 TDP2O95551 362 aa21.75■■□□□ 1.07
COL9A2-204ENST00000427563 USP11P51784 963 aa21.75■■□□□ 1.07
COL9A2-204ENST00000427563 IGBP1P78318 339 aa21.75■■□□□ 1.07
COL9A2-204ENST00000427563 ANKRD1Q15327 319 aa21.75■■□□□ 1.07
COL9A2-204ENST00000427563 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.75■■□□□ 1.07
COL9A2-204ENST00000427563 SPRED2Q7Z698 418 aa21.75■■□□□ 1.07
COL9A2-204ENST00000427563 PRDM12Q9H4Q4 367 aa21.75■■□□□ 1.07
COL9A2-204ENST00000427563 AZI2Q9H6S1 392 aa21.75■■□□□ 1.07
COL9A2-204ENST00000427563 EVPLQ92817 2033 aa21.75■■□□□ 1.07
COL9A2-204ENST00000427563 CDKL5O76039 1030 aa21.74■■□□□ 1.07
COL9A2-204ENST00000427563 CA3P07451 260 aa21.74■■□□□ 1.07
COL9A2-204ENST00000427563 ADGRE1Q14246 886 aa21.74■■□□□ 1.07
COL9A2-204ENST00000427563 FAM177A1Q8N128 213 aaPredicted RBP21.74■■□□□ 1.07
COL9A2-204ENST00000427563 OXER1Q8TDS5 423 aa21.74■■□□□ 1.07
COL9A2-204ENST00000427563 DNAJB3Q8WWF6 145 aa21.74■■□□□ 1.07
COL9A2-204ENST00000427563 MBOAT7Q96N66 472 aa21.74■■□□□ 1.07
COL9A2-204ENST00000427563 ABHD14A-ACY1A0A1B0GW23 586 aa21.73■■□□□ 1.07
COL9A2-204ENST00000427563 ZBTB42B2RXF5 422 aa21.73■■□□□ 1.07
COL9A2-204ENST00000427563 FOSL2P15408 326 aa21.73■■□□□ 1.07
COL9A2-204ENST00000427563 EARS2Q5JPH6 523 aaKnown RBP21.73■■□□□ 1.07
COL9A2-204ENST00000427563 ZNF746Q6NUN9 644 aaPredicted RBP21.73■■□□□ 1.07
COL9A2-204ENST00000427563 SWSAP1Q6NVH7 229 aa21.73■■□□□ 1.07
COL9A2-204ENST00000427563 NSUN7Q8NE18 718 aaKnown RBP21.73■■□□□ 1.07
COL9A2-204ENST00000427563 SLC5A5Q92911 643 aa21.73■■□□□ 1.07
COL9A2-204ENST00000427563 SLC28A3Q9HAS3 691 aa21.73■■□□□ 1.07
COL9A2-204ENST00000427563 TBC1D22BQ9NU19 505 aa21.73■■□□□ 1.07
COL9A2-204ENST00000427563 ORC3Q9UBD5 711 aaPredicted RBP21.73■■□□□ 1.07
COL9A2-204ENST00000427563 TRPC6Q9Y210 931 aa21.73■■□□□ 1.07
COL9A2-204ENST00000427563 CYP3A7-CYP3A51PA0A087WV96 503 aa21.72■■□□□ 1.07
COL9A2-204ENST00000427563 POTEB3A0JP26 581 aa21.72■■□□□ 1.07
COL9A2-204ENST00000427563 LCHNA4D1U4 455 aa21.72■■□□□ 1.07
COL9A2-204ENST00000427563 JAK2O60674 1132 aa21.72■■□□□ 1.07
COL9A2-204ENST00000427563 CYP3A7P24462 503 aa21.72■■□□□ 1.07
COL9A2-204ENST00000427563 KCNJ6P48051 423 aa21.72■■□□□ 1.07
COL9A2-204ENST00000427563 IKBKEQ14164 716 aa21.72■■□□□ 1.07
COL9A2-204ENST00000427563 Q4G0T1 1027 aa21.72■■□□□ 1.07
COL9A2-204ENST00000427563 GALNT17Q6IS24 598 aa21.72■■□□□ 1.07
COL9A2-204ENST00000427563 TAF2Q6P1X5 1199 aa21.72■■□□□ 1.07
COL9A2-204ENST00000427563 POTEBQ6S5H4 581 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms