RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 MDM2Q00987 491 aaPredicted RBP28.38■■■□□ 2.13
HERPUD2-205ENST00000427455 ORC2Q13416 577 aaPredicted RBP28.38■■■□□ 2.13
HERPUD2-205ENST00000427455 B3GNT9Q6UX72 402 aa28.38■■■□□ 2.13
HERPUD2-205ENST00000427455 SLFN12Q8IYM2 578 aa28.38■■■□□ 2.13
HERPUD2-205ENST00000427455 RDM1Q8NG50 284 aa28.38■■■□□ 2.13
HERPUD2-205ENST00000427455 HAS1Q92839 578 aa28.38■■■□□ 2.13
HERPUD2-205ENST00000427455 CTAGE1Q96RT6 745 aa28.38■■■□□ 2.13
HERPUD2-205ENST00000427455 NOC4LQ9BVI4 516 aaKnown RBP28.38■■■□□ 2.13
HERPUD2-205ENST00000427455 PPP1R12CQ9BZL4 782 aa28.38■■■□□ 2.13
HERPUD2-205ENST00000427455 ZNF302Q9NR11 478 aa28.38■■■□□ 2.13
HERPUD2-205ENST00000427455 DISC1Q9NRI5 854 aa28.38■■■□□ 2.13
HERPUD2-205ENST00000427455 BAG4O95429 457 aaKnown RBP28.37■■■□□ 2.13
HERPUD2-205ENST00000427455 GNAT1P11488 350 aa28.37■■■□□ 2.13
HERPUD2-205ENST00000427455 ATP2B1P20020 1258 aa28.37■■■□□ 2.13
HERPUD2-205ENST00000427455 CALCRLQ16602 461 aa28.37■■■□□ 2.13
HERPUD2-205ENST00000427455 CHRDL2Q6WN34 429 aa28.37■■■□□ 2.13
HERPUD2-205ENST00000427455 BADQ92934 168 aa28.37■■■□□ 2.13
HERPUD2-205ENST00000427455 NRCAMQ92823 1304 aa28.37■■■□□ 2.13
HERPUD2-205ENST00000427455 PPFIA1Q13136 1202 aa28.36■■■□□ 2.13
HERPUD2-205ENST00000427455 PPP2R5CQ13362 524 aa28.36■■■□□ 2.13
HERPUD2-205ENST00000427455 HIC1Q14526 733 aa28.36■■■□□ 2.13
HERPUD2-205ENST00000427455 SWSAP1Q6NVH7 229 aa28.36■■■□□ 2.13
HERPUD2-205ENST00000427455 PDXDC2PQ6P474 469 aa28.36■■■□□ 2.13
HERPUD2-205ENST00000427455 MIER3Q7Z3K6 550 aa28.36■■■□□ 2.13
HERPUD2-205ENST00000427455 TNPO1Q92973 898 aaKnown RBP28.36■■■□□ 2.13
HERPUD2-205ENST00000427455 VAV3Q9UKW4 847 aa28.36■■■□□ 2.13
HERPUD2-205ENST00000427455 TRPC6Q9Y210 931 aa28.36■■■□□ 2.13
HERPUD2-205ENST00000427455 IGSF9BQ9UPX0 1349 aa28.36■■■□□ 2.13
HERPUD2-205ENST00000427455 RANBP2P49792 3224 aaKnown RBP28.35■■■□□ 2.13
HERPUD2-205ENST00000427455 MCM7P33993 719 aa28.35■■■□□ 2.13
HERPUD2-205ENST00000427455 PTK7Q13308 1070 aa28.35■■■□□ 2.13
HERPUD2-205ENST00000427455 PLCB4Q15147 1175 aa28.35■■■□□ 2.13
HERPUD2-205ENST00000427455 TTC38Q5R3I4 469 aa28.35■■■□□ 2.13
HERPUD2-205ENST00000427455 MFSD5Q6N075 450 aa28.35■■■□□ 2.13
HERPUD2-205ENST00000427455 CCDC155Q8N6L0 562 aa28.35■■■□□ 2.13
HERPUD2-205ENST00000427455 LMBR1Q8WVP7 490 aa28.35■■■□□ 2.13
HERPUD2-205ENST00000427455 ATP6V0A1Q93050 837 aa28.35■■■□□ 2.13
HERPUD2-205ENST00000427455 SETD4Q9NVD3 440 aa28.35■■■□□ 2.13
HERPUD2-205ENST00000427455 MAFBQ9Y5Q3 323 aaPredicted RBP28.35■■■□□ 2.13
HERPUD2-205ENST00000427455 PITPNM1O00562 1244 aa28.34■■■□□ 2.13
HERPUD2-205ENST00000427455 ZNF200P98182 395 aaPredicted RBP28.34■■■□□ 2.13
HERPUD2-205ENST00000427455 BFSP2Q13515 415 aa28.34■■■□□ 2.13
HERPUD2-205ENST00000427455 CAGE1Q8TC20 777 aa28.34■■■□□ 2.13
HERPUD2-205ENST00000427455 PRO3102Q9H379 93 aa28.34■■■□□ 2.13
HERPUD2-205ENST00000427455 FOXD4L1Q9NU39 408 aa28.34■■■□□ 2.13
HERPUD2-205ENST00000427455 GABBR1Q9UBS5 961 aa28.34■■■□□ 2.13
HERPUD2-205ENST00000427455 UMODL1Q5DID0 1318 aa28.34■■■□□ 2.13
HERPUD2-205ENST00000427455 TANC1Q9C0D5 1861 aa28.34■■■□□ 2.13
HERPUD2-205ENST00000427455 WDR81Q562E7 1941 aa28.33■■■□□ 2.13
HERPUD2-205ENST00000427455 MYH9P35579 1960 aaKnown RBP28.33■■■□□ 2.13
HERPUD2-205ENST00000427455 POTEB3A0JP26 581 aa28.33■■■□□ 2.13
HERPUD2-205ENST00000427455 CYP2C18P33260 490 aa28.33■■■□□ 2.13
HERPUD2-205ENST00000427455 BMP8BP34820 402 aa28.33■■■□□ 2.13
HERPUD2-205ENST00000427455 GRIK4Q16099 956 aa28.33■■■□□ 2.13
HERPUD2-205ENST00000427455 POTEBQ6S5H4 581 aa28.33■■■□□ 2.13
HERPUD2-205ENST00000427455 SERINC5Q86VE9 423 aa28.33■■■□□ 2.13
HERPUD2-205ENST00000427455 ATP8B4Q8TF62 1192 aa28.33■■■□□ 2.13
HERPUD2-205ENST00000427455 TRIP12Q14669 1992 aaPredicted RBP28.33■■■□□ 2.13
HERPUD2-205ENST00000427455 KAT6AQ92794 2004 aa28.32■■■□□ 2.12
HERPUD2-205ENST00000427455 VPS37CA5D8V6 355 aaPredicted RBP28.32■■■□□ 2.12
HERPUD2-205ENST00000427455 TREHO43280 583 aa28.32■■■□□ 2.12
HERPUD2-205ENST00000427455 HSP90AA1P07900 732 aaKnown RBP28.32■■■□□ 2.12
HERPUD2-205ENST00000427455 ADAM17P78536 824 aa28.32■■■□□ 2.12
HERPUD2-205ENST00000427455 FPGSQ05932 587 aa28.32■■■□□ 2.12
HERPUD2-205ENST00000427455 RBL2Q08999 1139 aa28.32■■■□□ 2.12
HERPUD2-205ENST00000427455 TMEM199Q8N511 208 aa28.32■■■□□ 2.12
HERPUD2-205ENST00000427455 DHX38Q92620 1227 aaKnown RBP28.32■■■□□ 2.12
HERPUD2-205ENST00000427455 MTMR9Q96QG7 549 aa28.32■■■□□ 2.12
HERPUD2-205ENST00000427455 WNT8AQ9H1J5 351 aa28.32■■■□□ 2.12
HERPUD2-205ENST00000427455 RRN3P2A6NIE6 340 aa28.31■■■□□ 2.12
HERPUD2-205ENST00000427455 INSRRP14616 1297 aa28.31■■■□□ 2.12
HERPUD2-205ENST00000427455 TOB1P50616 345 aaPredicted RBP28.31■■■□□ 2.12
HERPUD2-205ENST00000427455 ZNF174Q15697 407 aa28.31■■■□□ 2.12
HERPUD2-205ENST00000427455 RILPL1Q5EBL4 403 aa28.31■■■□□ 2.12
HERPUD2-205ENST00000427455 CKAP2LQ8IYA6 745 aa28.31■■■□□ 2.12
HERPUD2-205ENST00000427455 FAM167AQ96KS9 214 aa28.31■■■□□ 2.12
HERPUD2-205ENST00000427455 UBE2OQ9C0C9 1292 aaKnown RBP28.31■■■□□ 2.12
HERPUD2-205ENST00000427455 TMEM60Q9H2L4 133 aa28.31■■■□□ 2.12
HERPUD2-205ENST00000427455 COLQQ9Y215 455 aaPredicted RBP28.31■■■□□ 2.12
HERPUD2-205ENST00000427455 HBP1O60381 514 aa28.3■■■□□ 2.12
HERPUD2-205ENST00000427455 SYT1P21579 422 aa28.3■■■□□ 2.12
HERPUD2-205ENST00000427455 SPIRE1Q08AE8 756 aa28.3■■■□□ 2.12
HERPUD2-205ENST00000427455 NBR1Q14596 966 aa28.3■■■□□ 2.12
HERPUD2-205ENST00000427455 RETREG2Q8NC44 543 aa28.3■■■□□ 2.12
HERPUD2-205ENST00000427455 TUBE1Q9UJT0 475 aa28.3■■■□□ 2.12
HERPUD2-205ENST00000427455 PCDHA12Q9UN75 941 aa28.3■■■□□ 2.12
HERPUD2-205ENST00000427455 COL1A2P08123 1366 aa28.29■■■□□ 2.12
HERPUD2-205ENST00000427455 EML1O00423 815 aa28.29■■■□□ 2.12
HERPUD2-205ENST00000427455 ATP4AP20648 1035 aa28.29■■■□□ 2.12
HERPUD2-205ENST00000427455 CCL23P55773 120 aa28.29■■■□□ 2.12
HERPUD2-205ENST00000427455 PPIGQ13427 754 aaKnown RBP eCLIP28.29■■■□□ 2.12
HERPUD2-205ENST00000427455 UGCGQ16739 394 aa28.29■■■□□ 2.12
HERPUD2-205ENST00000427455 TRIM71Q2Q1W2 868 aaKnown RBP28.29■■■□□ 2.12
HERPUD2-205ENST00000427455 BRAPQ7Z569 592 aa28.29■■■□□ 2.12
HERPUD2-205ENST00000427455 BBXQ8WY36 941 aaPredicted RBP28.29■■■□□ 2.12
HERPUD2-205ENST00000427455 TTC12Q9H892 705 aaPredicted RBP28.29■■■□□ 2.12
HERPUD2-205ENST00000427455 MBLAC1A4D2B0 266 aaPredicted RBP28.28■■■□□ 2.12
HERPUD2-205ENST00000427455 ZNF862O60290 1169 aa28.28■■■□□ 2.12
HERPUD2-205ENST00000427455 OR52Z1P0C646 297 aa28.28■■■□□ 2.12
HERPUD2-205ENST00000427455 CSF2RAP15509 400 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms