RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 TRIM43BA6NCK2 446 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 ELOA3DA6NLF2 546 aaPredicted RBP7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 METTL12A8MUP2 240 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 C19orf81C9J6K1 198 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 CPB1P15086 417 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 RAG1P15918 1043 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 ZKSCAN1P17029 563 aaPredicted RBP7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 ADD2P35612 726 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 ADH7P40394 386 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 PLCD1P51178 756 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 CACNB2Q08289 660 aaPredicted RBP7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 UBE3CQ15386 1083 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 SF3A1Q15459 793 aaKnown RBP7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 ELOA3BQ3SY89 546 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 PERM1Q5SV97 790 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 ANKRD45Q5TZF3 282 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 TATDN1Q6P1N9 297 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 ELMSAN1Q6PJG2 1045 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 LCORLQ8N3X6 602 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 PRSS33Q8NF86 280 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 ELOA3Q8NG57 546 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 ASAP3Q8TDY4 903 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 TRIM43Q96BQ3 446 aaPredicted RBP7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 GPATCH3Q96I76 525 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 MFSD14AQ96MC6 490 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 WDR18Q9BV38 432 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 NKX2-4Q9H2Z4 354 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 DNAJC18Q9H819 358 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 ARMT1Q9H993 441 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 SLC28A3Q9HAS3 691 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 CAPN10Q9HC96 672 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 GINM1Q9NU53 330 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 FAM86C1Q9NVL1 165 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 MCM9Q9NXL9 1143 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 SLC45A1Q9Y2W3 748 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 ZFHX4Q86UP3 3567 aa7.38□□□□□ -1.23
NIF3L1-207ENST00000426253 REV3LO60673 3130 aa7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 DNM1LO00429 736 aa7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 PRKAB2O43741 272 aa7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 GDF11O95390 407 aa7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 CHGBP05060 677 aa7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 ALAS2P22557 587 aa7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 HMGCS2P54868 508 aa7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 BACE1P56817 501 aa7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 PABPC4Q13310 644 aaKnown RBP eCLIP7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 RAB30Q15771 203 aa7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 ABCB5Q2M3G0 1257 aa7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 CERKLQ49MI3 558 aaPredicted RBP7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 TREML2Q5T2D2 321 aa7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 SLC39A5Q6ZMH5 540 aa7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 FCHSD1Q86WN1 690 aa7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 GOLGA6L1Q8N7Z2 621 aa7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 SDR42E1Q8WUS8 393 aa7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 LPIN3Q9BQK8 851 aa7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 PUS7LQ9H0K6 701 aaKnown RBP7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 CABP5Q9NP86 173 aa7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 DCP1AQ9NPI6 582 aaPredicted RBP7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 ATP8A2Q9NTI2 1148 aa7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 TMOD4Q9NZQ9 345 aa7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 GDF2Q9UK05 429 aaPredicted RBP7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 AGTPBP1Q9UPW5 1226 aa7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 PCDHGB7Q9Y5F8 929 aa7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 A0A0G2JMZ2 1700 aa7.37□□□□□ -1.23
NIF3L1-207ENST00000426253 SPTBN4Q9H254 2564 aa7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 TTC41PQ6P2S7 1318 aa7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 MED19A0JLT2 244 aaPredicted RBP7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 RNF113AO15541 343 aaKnown RBP7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 DCXO43602 365 aa7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 MBD4O95243 580 aa7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 GH2P01242 217 aa7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 CNGA1P29973 690 aa7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 RAB3GAP1Q15042 981 aa7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 FAM110CQ1W6H9 321 aa7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 SHROOM1Q2M3G4 852 aaPredicted RBP7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 TSHZ3Q63HK5 1081 aa7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 AMOTL1Q8IY63 956 aa7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 KBTBD3Q8NAB2 608 aa7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 TMEM74Q96NL1 305 aa7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 SMG9Q9H0W8 520 aaKnown RBP7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 MUC3BQ9H195 1237 aa7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 CLEC4MQ9H2X3 399 aaPredicted RBP7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 RWDD1Q9H446 243 aaPredicted RBP7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 KBTBD4Q9NVX7 518 aa7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 GJD2Q9UKL4 321 aa7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 ZBTB21Q9ULJ3 1066 aa7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 INPP5FQ9Y2H2 1132 aa7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 SUPT16HQ9Y5B9 1047 aaKnown RBP7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 SLC4A4Q9Y6R1 1079 aa7.36□□□□□ -1.23
NIF3L1-207ENST00000426253 RLFQ13129 1914 aa7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 MYO5AQ9Y4I1 1855 aaKnown RBP7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 MPHOSPH10O00566 681 aaKnown RBP7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 TERTO14746 1132 aaKnown RBP7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 GLRX3O76003 335 aaKnown RBP7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 ZFYP08048 801 aaPredicted RBP7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 CYP2D6P10635 497 aa7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 HOXA7P31268 230 aaPredicted RBP7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 SHMT1P34896 483 aa7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 GCLCP48506 637 aaPredicted RBP7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 SRSF11Q05519 484 aaKnown RBP7.35□□□□□ -1.23
NIF3L1-207ENST00000426253 GABPAQ06546 454 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms