RNA–Protein interactions for RNA: ENST00000424766.5

PMS1-211, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-211ENST00000424766 MAFBQ9Y5Q3 323 aaPredicted RBP23.2■■□□□ 1.3
PMS1-211ENST00000424766 ALPK3Q96L96 1907 aa23.2■■□□□ 1.3
PMS1-211ENST00000424766 MROH7Q68CQ1 1323 aa23.19■■□□□ 1.3
PMS1-211ENST00000424766 EML1O00423 815 aa23.19■■□□□ 1.3
PMS1-211ENST00000424766 NUCB2P80303 420 aa23.19■■□□□ 1.3
PMS1-211ENST00000424766 PDIA5Q14554 519 aa23.19■■□□□ 1.3
PMS1-211ENST00000424766 SF3A1Q15459 793 aaKnown RBP23.19■■□□□ 1.3
PMS1-211ENST00000424766 TMEM266Q2M3C6 531 aa23.19■■□□□ 1.3
PMS1-211ENST00000424766 SESTD1Q86VW0 696 aa23.19■■□□□ 1.3
PMS1-211ENST00000424766 TRIM50Q86XT4 487 aa23.19■■□□□ 1.3
PMS1-211ENST00000424766 CCDC60Q8IWA6 550 aaPredicted RBP23.19■■□□□ 1.3
PMS1-211ENST00000424766 TNPO1Q92973 898 aaKnown RBP23.19■■□□□ 1.3
PMS1-211ENST00000424766 TECP42680 631 aa23.18■■□□□ 1.3
PMS1-211ENST00000424766 FXR2P51116 673 aaKnown RBP eCLIP23.18■■□□□ 1.3
PMS1-211ENST00000424766 RTP1P59025 263 aa23.18■■□□□ 1.3
PMS1-211ENST00000424766 ATL3Q6DD88 541 aa23.18■■□□□ 1.3
PMS1-211ENST00000424766 NCAPH2Q6IBW4 605 aa23.18■■□□□ 1.3
PMS1-211ENST00000424766 PDXDC2PQ6P474 469 aa23.18■■□□□ 1.3
PMS1-211ENST00000424766 DTHD1Q6ZMT9 781 aa23.18■■□□□ 1.3
PMS1-211ENST00000424766 ANKRD33Q7Z3H0 272 aa23.18■■□□□ 1.3
PMS1-211ENST00000424766 TOX2Q96NM4 488 aa23.18■■□□□ 1.3
PMS1-211ENST00000424766 RNPEPQ9H4A4 650 aa23.18■■□□□ 1.3
PMS1-211ENST00000424766 GABBR1Q9UBS5 961 aa23.18■■□□□ 1.3
PMS1-211ENST00000424766 CLIC4Q9Y696 253 aa23.18■■□□□ 1.3
PMS1-211ENST00000424766 TRIP12Q14669 1992 aaPredicted RBP23.18■■□□□ 1.3
PMS1-211ENST00000424766 P4HBP07237 508 aaKnown RBP23.17■■□□□ 1.3
PMS1-211ENST00000424766 CHMP4BP1P59074 171 aa23.17■■□□□ 1.3
PMS1-211ENST00000424766 C7orf31Q8N865 590 aa23.17■■□□□ 1.3
PMS1-211ENST00000424766 RAB34Q9BZG1 259 aa23.17■■□□□ 1.3
PMS1-211ENST00000424766 PTPAQ15257 358 aa23.16■■□□□ 1.3
PMS1-211ENST00000424766 ATP6V0A1Q93050 837 aa23.16■■□□□ 1.3
PMS1-211ENST00000424766 USP28Q96RU2 1077 aa23.16■■□□□ 1.3
PMS1-211ENST00000424766 HDAC6Q9UBN7 1215 aa23.16■■□□□ 1.3
PMS1-211ENST00000424766 MORC2Q9Y6X9 1032 aaPredicted RBP23.16■■□□□ 1.3
PMS1-211ENST00000424766 IGSF9BQ9UPX0 1349 aa23.15■■□□□ 1.3
PMS1-211ENST00000424766 DCDC2CA8MYV0 355 aa23.15■■□□□ 1.3
PMS1-211ENST00000424766 DKC1O60832 514 aaKnown RBP eCLIP23.15■■□□□ 1.3
PMS1-211ENST00000424766 PSMC5P62195 406 aa23.15■■□□□ 1.3
PMS1-211ENST00000424766 TLE2Q04725 743 aa23.15■■□□□ 1.3
PMS1-211ENST00000424766 SLC39A14Q15043 492 aa23.15■■□□□ 1.3
PMS1-211ENST00000424766 PLCB4Q15147 1175 aa23.15■■□□□ 1.3
PMS1-211ENST00000424766 IL17AQ16552 155 aa23.15■■□□□ 1.3
PMS1-211ENST00000424766 TRIM60Q495X7 471 aa23.15■■□□□ 1.3
PMS1-211ENST00000424766 FAM47CQ5HY64 1035 aa23.15■■□□□ 1.3
PMS1-211ENST00000424766 IGSF22Q8N9C0 903 aa23.15■■□□□ 1.3
PMS1-211ENST00000424766 NEK9Q8TD19 979 aa23.15■■□□□ 1.3
PMS1-211ENST00000424766 EIF2AK1Q9BQI3 630 aaKnown RBP23.15■■□□□ 1.3
PMS1-211ENST00000424766 GTF2IRD1Q9UHL9 959 aa23.15■■□□□ 1.3
PMS1-211ENST00000424766 CIZ1Q9ULV3 898 aaPredicted RBP23.15■■□□□ 1.3
PMS1-211ENST00000424766 ATP11BQ9Y2G3 1177 aa23.15■■□□□ 1.3
PMS1-211ENST00000424766 ATP6V1DQ9Y5K8 247 aa23.15■■□□□ 1.3
PMS1-211ENST00000424766 STK24Q9Y6E0 443 aa23.15■■□□□ 1.3
PMS1-211ENST00000424766 POTEB3A0JP26 581 aa23.14■■□□□ 1.29
PMS1-211ENST00000424766 POTEMA6NI47 508 aa23.14■■□□□ 1.29
PMS1-211ENST00000424766 TLR3O15455 904 aaKnown RBP23.14■■□□□ 1.29
PMS1-211ENST00000424766 HBP1O60381 514 aa23.14■■□□□ 1.29
PMS1-211ENST00000424766 SMIM10L2AP0DMW4 78 aa23.14■■□□□ 1.29
PMS1-211ENST00000424766 SMIM10L2BP0DMW5 78 aa23.14■■□□□ 1.29
PMS1-211ENST00000424766 ATP4AP20648 1035 aa23.14■■□□□ 1.29
PMS1-211ENST00000424766 MARK3P27448 753 aa23.14■■□□□ 1.29
PMS1-211ENST00000424766 QARSP47897 775 aaKnown RBP23.14■■□□□ 1.29
PMS1-211ENST00000424766 NASPP49321 788 aaPredicted RBP23.14■■□□□ 1.29
PMS1-211ENST00000424766 POTEBQ6S5H4 581 aa23.14■■□□□ 1.29
PMS1-211ENST00000424766 FAM126BQ8IXS8 530 aa23.14■■□□□ 1.29
PMS1-211ENST00000424766 CKAP2LQ8IYA6 745 aa23.14■■□□□ 1.29
PMS1-211ENST00000424766 ATP8B4Q8TF62 1192 aa23.14■■□□□ 1.29
PMS1-211ENST00000424766 BBXQ8WY36 941 aaPredicted RBP23.14■■□□□ 1.29
PMS1-211ENST00000424766 FAM167AQ96KS9 214 aa23.14■■□□□ 1.29
PMS1-211ENST00000424766 HSD17B14Q9BPX1 270 aa23.14■■□□□ 1.29
PMS1-211ENST00000424766 FTOQ9C0B1 505 aaKnown RBP eCLIP23.14■■□□□ 1.29
PMS1-211ENST00000424766 NRBP2Q9NSY0 501 aa23.14■■□□□ 1.29
PMS1-211ENST00000424766 TFIP11Q9UBB9 837 aaKnown RBP23.14■■□□□ 1.29
PMS1-211ENST00000424766 LRWD1Q9UFC0 647 aa23.14■■□□□ 1.29
PMS1-211ENST00000424766 TCHHQ07283 1943 aa23.14■■□□□ 1.29
PMS1-211ENST00000424766 NRCAMQ92823 1304 aa23.13■■□□□ 1.29
PMS1-211ENST00000424766 ZNF862O60290 1169 aa23.13■■□□□ 1.29
PMS1-211ENST00000424766 SLITRK3O94933 977 aa23.13■■□□□ 1.29
PMS1-211ENST00000424766 CD4P01730 458 aa23.13■■□□□ 1.29
PMS1-211ENST00000424766 GNAT1P11488 350 aa23.13■■□□□ 1.29
PMS1-211ENST00000424766 HOXC8P31273 242 aa23.13■■□□□ 1.29
PMS1-211ENST00000424766 CEBPZQ03701 1054 aaKnown RBP23.13■■□□□ 1.29
PMS1-211ENST00000424766 UGCGQ16739 394 aa23.13■■□□□ 1.29
PMS1-211ENST00000424766 BANK1Q8NDB2 785 aa23.13■■□□□ 1.29
PMS1-211ENST00000424766 ERMNQ8TAM6 284 aa23.13■■□□□ 1.29
PMS1-211ENST00000424766 PPP1R13LQ8WUF5 828 aa23.13■■□□□ 1.29
PMS1-211ENST00000424766 DPF3Q92784 378 aa23.13■■□□□ 1.29
PMS1-211ENST00000424766 DYDC2Q96IM9 177 aa23.13■■□□□ 1.29
PMS1-211ENST00000424766 CFAP45Q9UL16 551 aa23.13■■□□□ 1.29
PMS1-211ENST00000424766 C17orf102A2RUQ5 167 aa23.12■■□□□ 1.29
PMS1-211ENST00000424766 RRN3P2A6NIE6 340 aa23.12■■□□□ 1.29
PMS1-211ENST00000424766 EVI5O60447 810 aa23.12■■□□□ 1.29
PMS1-211ENST00000424766 PQBP1O60828 265 aaKnown RBP23.12■■□□□ 1.29
PMS1-211ENST00000424766 INSRRP14616 1297 aa23.12■■□□□ 1.29
PMS1-211ENST00000424766 GDF6Q6KF10 455 aaPredicted RBP23.12■■□□□ 1.29
PMS1-211ENST00000424766 C4orf19Q8IY42 314 aa23.12■■□□□ 1.29
PMS1-211ENST00000424766 LINC00301Q8NCQ3 95 aa23.12■■□□□ 1.29
PMS1-211ENST00000424766 IPO9Q96P70 1041 aaKnown RBP23.12■■□□□ 1.29
PMS1-211ENST00000424766 POLR3CQ9BUI4 534 aaPredicted RBP23.12■■□□□ 1.29
PMS1-211ENST00000424766 ZSWIM4Q9H7M6 989 aa23.12■■□□□ 1.29
PMS1-211ENST00000424766 TUFT1Q9NNX1 390 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms