RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 STXBP3O00186 592 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 BIN1O00499 593 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 NDUFB5O43674 189 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 PSMA3P25788 255 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 KRT2P35908 639 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 CACNB3P54284 484 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 PHEXP78562 749 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 TOMM20Q15388 145 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 APOBEC3HQ6NTF7 200 aaKnown RBP9.37□□□□□ -0.91
VPS8-204ENST00000424463 ZFPM1Q8IX07 1006 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 ZKSCAN4Q969J2 545 aaPredicted RBP9.37□□□□□ -0.91
VPS8-204ENST00000424463 SEMA4AQ9H3S1 761 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 HDAC9Q9UKV0 1011 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 LRRC37AA6NMS7 1700 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 COL11A2P13942 1736 aaPredicted RBP9.37□□□□□ -0.91
VPS8-204ENST00000424463 TLDC2A0PJX2 215 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 KIF2AO00139 706 aaPredicted RBP9.37□□□□□ -0.91
VPS8-204ENST00000424463 LSM1O15116 133 aaKnown RBP9.37□□□□□ -0.91
VPS8-204ENST00000424463 CYTH3O43739 400 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 ZEB2O60315 1214 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 CUTAO60888 179 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 SKAP2O75563 359 aaPredicted RBP9.37□□□□□ -0.91
VPS8-204ENST00000424463 KIF5BP33176 963 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 SYKP43405 635 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 NFIAQ12857 509 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 CAMK2BQ13554 666 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 CUL4BQ13620 913 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 GRM4Q14833 912 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 AOC3Q16853 763 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 PFKFB3Q16875 520 aaPredicted RBP9.37□□□□□ -0.91
VPS8-204ENST00000424463 RILPL1Q5EBL4 403 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 RESP18Q5W5W9 173 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 TLDC1Q6P9B6 456 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 RSPH3Q86UC2 560 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 CLEC10AQ8IUN9 316 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 TMCO5AQ8N6Q1 288 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 KRI1Q8N9T8 703 aaKnown RBP9.37□□□□□ -0.91
VPS8-204ENST00000424463 ZNF280CQ8ND82 737 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 NEDD1Q8NHV4 660 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 C7orf43Q8WVR3 580 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 DHX38Q92620 1227 aaKnown RBP9.37□□□□□ -0.91
VPS8-204ENST00000424463 LRRC45Q96CN5 670 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 CEP95Q96GE4 821 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 FBXO2Q9UK22 296 aaPredicted RBP9.37□□□□□ -0.91
VPS8-204ENST00000424463 HPSEQ9Y251 543 aa9.37□□□□□ -0.91
VPS8-204ENST00000424463 ECE2O60344 883 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 CAVIN2O95810 425 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 LDHAP00338 332 aaKnown RBP9.36□□□□□ -0.91
VPS8-204ENST00000424463 EIF6P56537 245 aaKnown RBP9.36□□□□□ -0.91
VPS8-204ENST00000424463 NLRP5P59047 1200 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 ROR2Q01974 943 aaKnown RBP9.36□□□□□ -0.91
VPS8-204ENST00000424463 ZNF174Q15697 407 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 BOLA3Q53S33 107 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 KAZNQ674X7 775 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 THOC7Q6I9Y2 204 aaKnown RBP9.36□□□□□ -0.91
VPS8-204ENST00000424463 FBXO38Q6PIJ6 1188 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 USP17L2Q6R6M4 530 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 USP49Q70CQ1 688 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 USP6NLQ92738 828 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 TNFRSF25Q93038 417 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 SH3KBP1Q96B97 665 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 OXCT2Q9BYC2 517 aaPredicted RBP9.36□□□□□ -0.91
VPS8-204ENST00000424463 ZNF287Q9HBT7 754 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 ZNHIT6Q9NWK9 470 aaKnown RBP9.36□□□□□ -0.91
VPS8-204ENST00000424463 SLC5A4Q9NY91 659 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 LAMB1P07942 1786 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 SMTNL1A8MU46 457 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 CLASP2O75122 1294 aaKnown RBP9.36□□□□□ -0.91
VPS8-204ENST00000424463 RPN1P04843 607 aaKnown RBP9.36□□□□□ -0.91
VPS8-204ENST00000424463 ZNF16P17020 682 aaPredicted RBP9.36□□□□□ -0.91
VPS8-204ENST00000424463 S100A5P33763 92 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 CRKP46108 304 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 BPIFB3P59826 476 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 PPIDQ08752 370 aaKnown RBP9.36□□□□□ -0.91
VPS8-204ENST00000424463 TCEAL1Q15170 157 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 STX1AQ16623 288 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 TYW1BQ6NUM6 668 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 ZNF449Q6P9G9 518 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 PODNQ7Z5L7 613 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 LURAP1LQ8IV03 231 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 TTC39CQ8N584 583 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 GIMAP8Q8ND71 665 aaPredicted RBP9.36□□□□□ -0.91
VPS8-204ENST00000424463 ALS2CR12Q96Q35 445 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.36□□□□□ -0.91
VPS8-204ENST00000424463 CHST12Q9NRB3 414 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 KCNH3Q9ULD8 1083 aa9.36□□□□□ -0.91
VPS8-204ENST00000424463 SNED1Q8TER0 1413 aa9.35□□□□□ -0.91
VPS8-204ENST00000424463 PALM3A6NDB9 673 aaPredicted RBP9.35□□□□□ -0.91
VPS8-204ENST00000424463 TRIM75PA6NK02 468 aa9.35□□□□□ -0.91
VPS8-204ENST00000424463 KLRF2D3W0D1 207 aa9.35□□□□□ -0.91
VPS8-204ENST00000424463 CHUKO15111 745 aa9.35□□□□□ -0.91
VPS8-204ENST00000424463 FOXN1O15353 648 aa9.35□□□□□ -0.91
VPS8-204ENST00000424463 PDGFRBP09619 1106 aa9.35□□□□□ -0.91
VPS8-204ENST00000424463 AKR1B1P15121 316 aa9.35□□□□□ -0.91
VPS8-204ENST00000424463 PTPREP23469 700 aa9.35□□□□□ -0.91
VPS8-204ENST00000424463 PEX5P50542 639 aa9.35□□□□□ -0.91
VPS8-204ENST00000424463 CLNS1AP54105 237 aaKnown RBP9.35□□□□□ -0.91
VPS8-204ENST00000424463 TCP10Q12799 353 aa9.35□□□□□ -0.91
VPS8-204ENST00000424463 PNOCQ13519 176 aa9.35□□□□□ -0.91
VPS8-204ENST00000424463 LRP8Q14114 963 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms