RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 SELPP16109 830 aa12.4□□□□□ -0.42
USP49-204ENST00000423567 MARK3P27448 753 aa12.4□□□□□ -0.42
USP49-204ENST00000423567 KRT2P35908 639 aa12.4□□□□□ -0.42
USP49-204ENST00000423567 KRT76Q01546 638 aa12.4□□□□□ -0.42
USP49-204ENST00000423567 PPFIA1Q13136 1202 aa12.4□□□□□ -0.42
USP49-204ENST00000423567 TMEM240Q5SV17 173 aa12.4□□□□□ -0.42
USP49-204ENST00000423567 MIS18BP1Q6P0N0 1132 aa12.4□□□□□ -0.42
USP49-204ENST00000423567 ZNF365Q70YC5 407 aa12.4□□□□□ -0.42
USP49-204ENST00000423567 DEFB128Q7Z7B8 93 aa12.4□□□□□ -0.42
USP49-204ENST00000423567 CCDC83Q8IWF9 413 aa12.4□□□□□ -0.42
USP49-204ENST00000423567 LRCH3Q96II8 777 aa12.4□□□□□ -0.42
USP49-204ENST00000423567 KIF2CQ99661 725 aa12.4□□□□□ -0.42
USP49-204ENST00000423567 NAP1L4Q99733 375 aaKnown RBP12.4□□□□□ -0.42
USP49-204ENST00000423567 LLPHQ9BRT6 129 aaKnown RBP12.4□□□□□ -0.42
USP49-204ENST00000423567 FTOQ9C0B1 505 aaKnown RBP eCLIP12.4□□□□□ -0.42
USP49-204ENST00000423567 RNPEPQ9H4A4 650 aa12.4□□□□□ -0.42
USP49-204ENST00000423567 SETD4Q9NVD3 440 aa12.4□□□□□ -0.42
USP49-204ENST00000423567 TELO2Q9Y4R8 837 aa12.4□□□□□ -0.42
USP49-204ENST00000423567 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.39□□□□□ -0.43
USP49-204ENST00000423567 M0R2N6 131 aa12.39□□□□□ -0.43
USP49-204ENST00000423567 JAK2O60674 1132 aa12.39□□□□□ -0.43
USP49-204ENST00000423567 LGR5O75473 907 aa12.39□□□□□ -0.43
USP49-204ENST00000423567 IQCF3P0C7M6 154 aa12.39□□□□□ -0.43
USP49-204ENST00000423567 FDPSP14324 419 aaKnown RBP12.39□□□□□ -0.43
USP49-204ENST00000423567 THPOP40225 353 aa12.39□□□□□ -0.43
USP49-204ENST00000423567 SLC26A2P50443 739 aa12.39□□□□□ -0.43
USP49-204ENST00000423567 STAT5BP51692 787 aa12.39□□□□□ -0.43
USP49-204ENST00000423567 HMGN5P82970 282 aaKnown RBP12.39□□□□□ -0.43
USP49-204ENST00000423567 ZNF200P98182 395 aaPredicted RBP12.39□□□□□ -0.43
USP49-204ENST00000423567 RBL2Q08999 1139 aa12.39□□□□□ -0.43
USP49-204ENST00000423567 SAFBQ15424 915 aaKnown RBP eCLIP12.39□□□□□ -0.43
USP49-204ENST00000423567 INF2Q27J81 1249 aa12.39□□□□□ -0.43
USP49-204ENST00000423567 ZNF746Q6NUN9 644 aaPredicted RBP12.39□□□□□ -0.43
USP49-204ENST00000423567 GPR153Q6NV75 609 aa12.39□□□□□ -0.43
USP49-204ENST00000423567 MOXD1Q6UVY6 613 aa12.39□□□□□ -0.43
USP49-204ENST00000423567 LRRC8DQ7L1W4 858 aa12.39□□□□□ -0.43
USP49-204ENST00000423567 C16orf59Q7L2K0 433 aa12.39□□□□□ -0.43
USP49-204ENST00000423567 PLPPR4Q7Z2D5 763 aa12.39□□□□□ -0.43
USP49-204ENST00000423567 SERINC5Q86VE9 423 aa12.39□□□□□ -0.43
USP49-204ENST00000423567 SMAP1Q8IYB5 467 aaPredicted RBP12.39□□□□□ -0.43
USP49-204ENST00000423567 UIMC1Q96RL1 719 aa12.39□□□□□ -0.43
USP49-204ENST00000423567 SAMM50Q9Y512 469 aa12.39□□□□□ -0.43
USP49-204ENST00000423567 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.38□□□□□ -0.43
USP49-204ENST00000423567 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.38□□□□□ -0.43
USP49-204ENST00000423567 RRN3P2A6NIE6 340 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 ZBBXA8MT70 800 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 DHX15O43143 795 aaKnown RBP12.38□□□□□ -0.43
USP49-204ENST00000423567 TREHO43280 583 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 MARCH6O60337 910 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 GAS7O60861 476 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 DTNBO60941 627 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 CAND2O75155 1236 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 ATG7O95352 703 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 CCNE2O96020 404 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 PSAPP07602 524 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 CKBP12277 381 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 HOXC8P31273 242 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 SMAD3P84022 425 aaKnown RBP12.38□□□□□ -0.43
USP49-204ENST00000423567 NPY5RQ15761 445 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 GRIK4Q16099 956 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 LETM2Q2VYF4 491 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 Q4G0T1 1027 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 LRCH2Q5VUJ6 765 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 TAF2Q6P1X5 1199 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 PIK3AP1Q6ZUJ8 805 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 OTOP2Q7RTS6 562 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 NEK8Q86SG6 692 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 RSPH3Q86UC2 560 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 FAM184AQ8NB25 1140 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 LMBR1Q8WVP7 490 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 HERVK_113Q902F9 699 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 DHX38Q92620 1227 aaKnown RBP12.38□□□□□ -0.43
USP49-204ENST00000423567 CTAGE1Q96RT6 745 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 RIT2Q99578 217 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 TEKT3Q9BXF9 490 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 ZNF302Q9NR11 478 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 GJB4Q9NTQ9 266 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 PCDHA10Q9Y5I2 948 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 GTF3C3Q9Y5Q9 886 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 MYH7BA7E2Y1 1941 aa12.38□□□□□ -0.43
USP49-204ENST00000423567 CYP3A7-CYP3A51PA0A087WV96 503 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 WDR64B1ANS9 1081 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 RSPH10B2B2RC85 870 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 MSH4O15457 936 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 TDP2O95551 362 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 MMP1P03956 469 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 RPLP2P05387 115 aaKnown RBP12.37□□□□□ -0.43
USP49-204ENST00000423567 RSPH10BP0C881 870 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 GCFC2P16383 781 aaKnown RBP12.37□□□□□ -0.43
USP49-204ENST00000423567 CYP3A7P24462 503 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 SFNP31947 248 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 MCM2P49736 904 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 FOSBP53539 338 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 IGBP1P78318 339 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 ZNF618Q5T7W0 954 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 KRT40Q6A162 431 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 ABHD15Q6UXT9 468 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 CKAP2LQ8IYA6 745 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 OXER1Q8TDS5 423 aa12.37□□□□□ -0.43
USP49-204ENST00000423567 SLC5A5Q92911 643 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms