RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 SESTD1Q86VW0 696 aa17.77■□□□□ 0.44
BRAT1-202ENST00000421712 TNPO1Q92973 898 aaKnown RBP17.77■□□□□ 0.44
BRAT1-202ENST00000421712 TRIM43Q96BQ3 446 aaPredicted RBP17.77■□□□□ 0.44
BRAT1-202ENST00000421712 PCYT2Q99447 389 aa17.77■□□□□ 0.44
BRAT1-202ENST00000421712 PPP1R12CQ9BZL4 782 aa17.77■□□□□ 0.44
BRAT1-202ENST00000421712 KCNMB3Q9NPA1 279 aa17.77■□□□□ 0.44
BRAT1-202ENST00000421712 GABBR1Q9UBS5 961 aa17.77■□□□□ 0.44
BRAT1-202ENST00000421712 TRPC6Q9Y210 931 aa17.77■□□□□ 0.44
BRAT1-202ENST00000421712 KIAA0355O15063 1070 aa17.76■□□□□ 0.43
BRAT1-202ENST00000421712 SYT1P21579 422 aa17.76■□□□□ 0.43
BRAT1-202ENST00000421712 SFNP31947 248 aa17.76■□□□□ 0.43
BRAT1-202ENST00000421712 TXKP42681 527 aa17.76■□□□□ 0.43
BRAT1-202ENST00000421712 TRAPPC10P48553 1259 aa17.76■□□□□ 0.43
BRAT1-202ENST00000421712 ZNF200P98182 395 aaPredicted RBP17.76■□□□□ 0.43
BRAT1-202ENST00000421712 PRPF38BQ5VTL8 546 aaKnown RBP17.76■□□□□ 0.43
BRAT1-202ENST00000421712 CCDC60Q8IWA6 550 aaPredicted RBP17.76■□□□□ 0.43
BRAT1-202ENST00000421712 HAS1Q92839 578 aa17.76■□□□□ 0.43
BRAT1-202ENST00000421712 ATP6V0A1Q93050 837 aa17.76■□□□□ 0.43
BRAT1-202ENST00000421712 HIPK3Q9H422 1215 aa17.76■□□□□ 0.43
BRAT1-202ENST00000421712 SETD4Q9NVD3 440 aa17.76■□□□□ 0.43
BRAT1-202ENST00000421712 PCDHA12Q9UN75 941 aa17.76■□□□□ 0.43
BRAT1-202ENST00000421712 KAT6AQ92794 2004 aa17.76■□□□□ 0.43
BRAT1-202ENST00000421712 SLC26A2P50443 739 aa17.75■□□□□ 0.43
BRAT1-202ENST00000421712 IGBP1P78318 339 aa17.75■□□□□ 0.43
BRAT1-202ENST00000421712 PPFIA1Q13136 1202 aa17.75■□□□□ 0.43
BRAT1-202ENST00000421712 BECN1Q14457 450 aa17.75■□□□□ 0.43
BRAT1-202ENST00000421712 NBR1Q14596 966 aa17.75■□□□□ 0.43
BRAT1-202ENST00000421712 NCAPH2Q6IBW4 605 aa17.75■□□□□ 0.43
BRAT1-202ENST00000421712 BADQ92934 168 aa17.75■□□□□ 0.43
BRAT1-202ENST00000421712 TBX21Q9UL17 535 aa17.75■□□□□ 0.43
BRAT1-202ENST00000421712 IGKV6D-21A0A0A0MT36 114 aa17.74■□□□□ 0.43
BRAT1-202ENST00000421712 POTEB3A0JP26 581 aa17.74■□□□□ 0.43
BRAT1-202ENST00000421712 TIMP1P01033 207 aa17.74■□□□□ 0.43
BRAT1-202ENST00000421712 CYP2C18P33260 490 aa17.74■□□□□ 0.43
BRAT1-202ENST00000421712 MAGEA10P43363 369 aaPredicted RBP17.74■□□□□ 0.43
BRAT1-202ENST00000421712 PLCB4Q15147 1175 aa17.74■□□□□ 0.43
BRAT1-202ENST00000421712 RILPL1Q5EBL4 403 aa17.74■□□□□ 0.43
BRAT1-202ENST00000421712 POTEBQ6S5H4 581 aa17.74■□□□□ 0.43
BRAT1-202ENST00000421712 FERMT3Q86UX7 667 aa17.74■□□□□ 0.43
BRAT1-202ENST00000421712 RETREG2Q8NC44 543 aa17.74■□□□□ 0.43
BRAT1-202ENST00000421712 RDM1Q8NG50 284 aa17.74■□□□□ 0.43
BRAT1-202ENST00000421712 AFAP1L1Q8TED9 768 aa17.74■□□□□ 0.43
BRAT1-202ENST00000421712 TMEM60Q9H2L4 133 aa17.74■□□□□ 0.43
BRAT1-202ENST00000421712 TTC12Q9H892 705 aaPredicted RBP17.74■□□□□ 0.43
BRAT1-202ENST00000421712 PCDHB6Q9Y5E3 794 aa17.74■□□□□ 0.43
BRAT1-202ENST00000421712 NRCAMQ92823 1304 aa17.73■□□□□ 0.43
BRAT1-202ENST00000421712 TOB1P50616 345 aaPredicted RBP17.73■□□□□ 0.43
BRAT1-202ENST00000421712 PPP2R5CQ13362 524 aa17.73■□□□□ 0.43
BRAT1-202ENST00000421712 ORC2Q13416 577 aaPredicted RBP17.73■□□□□ 0.43
BRAT1-202ENST00000421712 BFSP2Q13515 415 aa17.73■□□□□ 0.43
BRAT1-202ENST00000421712 GRIK4Q16099 956 aa17.73■□□□□ 0.43
BRAT1-202ENST00000421712 CCDC155Q8N6L0 562 aa17.73■□□□□ 0.43
BRAT1-202ENST00000421712 VAV3Q9UKW4 847 aa17.73■□□□□ 0.43
BRAT1-202ENST00000421712 MYH9P35579 1960 aaKnown RBP17.73■□□□□ 0.43
BRAT1-202ENST00000421712 TRIP12Q14669 1992 aaPredicted RBP17.72■□□□□ 0.43
BRAT1-202ENST00000421712 RRN3P2A6NIE6 340 aa17.72■□□□□ 0.43
BRAT1-202ENST00000421712 EML1O00423 815 aa17.72■□□□□ 0.43
BRAT1-202ENST00000421712 TREHO43280 583 aa17.72■□□□□ 0.43
BRAT1-202ENST00000421712 STX6O43752 255 aa17.72■□□□□ 0.43
BRAT1-202ENST00000421712 HBP1O60381 514 aa17.72■□□□□ 0.43
BRAT1-202ENST00000421712 OR52Z1P0C646 297 aa17.72■□□□□ 0.43
BRAT1-202ENST00000421712 INSRRP14616 1297 aa17.72■□□□□ 0.43
BRAT1-202ENST00000421712 ITGB8P26012 769 aa17.72■□□□□ 0.43
BRAT1-202ENST00000421712 CCL23P55773 120 aa17.72■□□□□ 0.43
BRAT1-202ENST00000421712 HIC1Q14526 733 aa17.72■□□□□ 0.43
BRAT1-202ENST00000421712 CHRDL2Q6WN34 429 aa17.72■□□□□ 0.43
BRAT1-202ENST00000421712 BRAPQ7Z569 592 aa17.72■□□□□ 0.43
BRAT1-202ENST00000421712 TMEM199Q8N511 208 aa17.72■□□□□ 0.43
BRAT1-202ENST00000421712 BANK1Q8NDB2 785 aa17.72■□□□□ 0.43
BRAT1-202ENST00000421712 ATP8B4Q8TF62 1192 aa17.72■□□□□ 0.43
BRAT1-202ENST00000421712 LMBR1Q8WVP7 490 aa17.72■□□□□ 0.43
BRAT1-202ENST00000421712 MTMR9Q96QG7 549 aa17.72■□□□□ 0.43
BRAT1-202ENST00000421712 NOC4LQ9BVI4 516 aaKnown RBP17.72■□□□□ 0.43
BRAT1-202ENST00000421712 NRBP2Q9NSY0 501 aa17.72■□□□□ 0.43
BRAT1-202ENST00000421712 MAFBQ9Y5Q3 323 aaPredicted RBP17.72■□□□□ 0.43
BRAT1-202ENST00000421712 TECP42680 631 aa17.71■□□□□ 0.43
BRAT1-202ENST00000421712 PTGDRQ13258 359 aa17.71■□□□□ 0.43
BRAT1-202ENST00000421712 PTK7Q13308 1070 aa17.71■□□□□ 0.43
BRAT1-202ENST00000421712 TMEM266Q2M3C6 531 aa17.71■□□□□ 0.43
BRAT1-202ENST00000421712 BBXQ8WY36 941 aaPredicted RBP17.71■□□□□ 0.43
BRAT1-202ENST00000421712 FAM167AQ96KS9 214 aa17.71■□□□□ 0.43
BRAT1-202ENST00000421712 UBE2OQ9C0C9 1292 aaKnown RBP17.71■□□□□ 0.43
BRAT1-202ENST00000421712 UMODL1Q5DID0 1318 aa17.71■□□□□ 0.42
BRAT1-202ENST00000421712 DKC1O60832 514 aaKnown RBP eCLIP17.7■□□□□ 0.42
BRAT1-202ENST00000421712 ATP4AP20648 1035 aa17.7■□□□□ 0.42
BRAT1-202ENST00000421712 THPOP40225 353 aa17.7■□□□□ 0.42
BRAT1-202ENST00000421712 PSMC5P62195 406 aa17.7■□□□□ 0.42
BRAT1-202ENST00000421712 PRKCEQ02156 737 aa17.7■□□□□ 0.42
BRAT1-202ENST00000421712 FPGSQ05932 587 aa17.7■□□□□ 0.42
BRAT1-202ENST00000421712 EPHA7Q15375 998 aa17.7■□□□□ 0.42
BRAT1-202ENST00000421712 UGCGQ16739 394 aa17.7■□□□□ 0.42
BRAT1-202ENST00000421712 FOXD4L5Q5VV16 416 aaPredicted RBP17.7■□□□□ 0.42
BRAT1-202ENST00000421712 MFSD5Q6N075 450 aa17.7■□□□□ 0.42
BRAT1-202ENST00000421712 B3GNT9Q6UX72 402 aa17.7■□□□□ 0.42
BRAT1-202ENST00000421712 CAGE1Q8TC20 777 aa17.7■□□□□ 0.42
BRAT1-202ENST00000421712 TRAPPC12Q8WVT3 735 aa17.7■□□□□ 0.42
BRAT1-202ENST00000421712 FOXD4L4Q8WXT5 416 aaPredicted RBP17.7■□□□□ 0.42
BRAT1-202ENST00000421712 TUBE1Q9UJT0 475 aa17.7■□□□□ 0.42
BRAT1-202ENST00000421712 MTMR6Q9Y217 621 aa17.7■□□□□ 0.42
BRAT1-202ENST00000421712 CEP290O15078 2479 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms