RNA–Protein interactions for RNA: ENST00000417495.7

SP140-204, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-204ENST00000417495 LARGE1O95461 756 aa9.74□□□□□ -0.85
SP140-204ENST00000417495 LIFRP42702 1097 aa9.74□□□□□ -0.85
SP140-204ENST00000417495 IFFO1Q0D2I5 559 aa9.74□□□□□ -0.85
SP140-204ENST00000417495 SQSTM1Q13501 440 aa9.74□□□□□ -0.85
SP140-204ENST00000417495 PKP1Q13835 747 aa9.74□□□□□ -0.85
SP140-204ENST00000417495 FAM98CQ17RN3 349 aaKnown RBP9.74□□□□□ -0.85
SP140-204ENST00000417495 Q6ZUG5 572 aa9.74□□□□□ -0.85
SP140-204ENST00000417495 EDC3Q96F86 508 aaKnown RBP9.74□□□□□ -0.85
SP140-204ENST00000417495 C2orf49Q9BVC5 232 aaPredicted RBP9.74□□□□□ -0.85
SP140-204ENST00000417495 ARNT2Q9HBZ2 717 aa9.74□□□□□ -0.85
SP140-204ENST00000417495 FOCADQ5VW36 1801 aa9.74□□□□□ -0.85
SP140-204ENST00000417495 GPAA1O43292 621 aa9.74□□□□□ -0.85
SP140-204ENST00000417495 SLC26A4O43511 780 aa9.74□□□□□ -0.85
SP140-204ENST00000417495 BPNT1O95861 308 aa9.74□□□□□ -0.85
SP140-204ENST00000417495 SIM2Q14190 667 aaPredicted RBP9.74□□□□□ -0.85
SP140-204ENST00000417495 WTAPQ15007 396 aa9.74□□□□□ -0.85
SP140-204ENST00000417495 CCSAPQ6IQ19 270 aaPredicted RBP9.74□□□□□ -0.85
SP140-204ENST00000417495 KANK3Q6NY19 840 aa9.74□□□□□ -0.85
SP140-204ENST00000417495 CELF2-AS1Q8N7Q2 184 aa9.74□□□□□ -0.85
SP140-204ENST00000417495 UBR7Q8N806 425 aa9.74□□□□□ -0.85
SP140-204ENST00000417495 SYTL4Q96C24 671 aaPredicted RBP9.74□□□□□ -0.85
SP140-204ENST00000417495 NACAP1Q9BZK3 213 aa9.74□□□□□ -0.85
SP140-204ENST00000417495 DKK3Q9UBP4 350 aa9.74□□□□□ -0.85
SP140-204ENST00000417495 CIDEBQ9UHD4 219 aa9.74□□□□□ -0.85
SP140-204ENST00000417495 NSFL1CQ9UNZ2 370 aaKnown RBP9.74□□□□□ -0.85
SP140-204ENST00000417495 V9GY48 417 aaPredicted RBP9.74□□□□□ -0.85
SP140-204ENST00000417495 HOXD12P35452 270 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 ITIH3Q06033 890 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 SCARF1Q14162 830 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 SUZ12Q15022 739 aaKnown RBP9.73□□□□□ -0.85
SP140-204ENST00000417495 SEPT7Q16181 437 aaKnown RBP9.73□□□□□ -0.85
SP140-204ENST00000417495 PI16Q6UXB8 463 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 B4GALNT4Q76KP1 1039 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 CCDC83Q8IWF9 413 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 DNAJC7Q99615 494 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 PRKD2Q9BZL6 878 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 PIH1D3Q9NQM4 214 aaKnown RBP9.73□□□□□ -0.85
SP140-204ENST00000417495 AVENQ9NQS1 362 aaPredicted RBP9.73□□□□□ -0.85
SP140-204ENST00000417495 MYO1AQ9UBC5 1043 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 RTCBQ9Y3I0 505 aaKnown RBP9.73□□□□□ -0.85
SP140-204ENST00000417495 COL4A1P02462 1669 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 CCDC151A5D8V7 595 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 ZBBXA8MT70 800 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 FGAP02671 866 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 CNGA1P29973 690 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 GNAQP50148 359 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 TUBA1BP68363 451 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 KRT85P78386 507 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 CHRNDQ07001 517 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 BRD3Q15059 726 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 SH2D4BQ5SQS7 431 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 CCDC183Q5T5S1 534 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 TPTE2Q6XPS3 522 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 RBM43Q6ZSC3 357 aaKnown RBP9.73□□□□□ -0.85
SP140-204ENST00000417495 TUBA1AQ71U36 451 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 RNF135Q8IUD6 432 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 NSUN7Q8NE18 718 aaKnown RBP9.73□□□□□ -0.85
SP140-204ENST00000417495 DEPDC7Q96QD5 511 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 BRIP1Q9BX63 1249 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 KRT23Q9C075 422 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 MUC3BQ9H195 1237 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 GGT7Q9UJ14 662 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 HOOK1Q9UJC3 728 aaKnown RBP9.73□□□□□ -0.85
SP140-204ENST00000417495 TNS1Q9HBL0 1735 aaKnown RBP9.73□□□□□ -0.85
SP140-204ENST00000417495 PNMA6FA0A0J9YX94 578 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 TSPAN6O43657 245 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 MGRN1O60291 552 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 FZD6O60353 706 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 MGEA5O60502 916 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 SHOX2O60902 331 aaPredicted RBP9.73□□□□□ -0.85
SP140-204ENST00000417495 SMIM24O75264 130 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 TADA3O75528 432 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 GFPT2O94808 682 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 LINGO3P0C6S8 592 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 CD53P19397 219 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 ENDOUP21128 410 aaKnown RBP9.73□□□□□ -0.85
SP140-204ENST00000417495 PSMC4P43686 418 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 PHKA1P46020 1223 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 CHMP4BP1P59074 171 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 ACTN3Q08043 901 aaPredicted RBP9.73□□□□□ -0.85
SP140-204ENST00000417495 RESTQ13127 1097 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 NFE2Q16621 373 aaPredicted RBP9.73□□□□□ -0.85
SP140-204ENST00000417495 CCDC40Q4G0X9 1142 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 FAM196AQ6ZSG2 479 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 BPHLQ86WA6 291 aaPredicted RBP9.73□□□□□ -0.85
SP140-204ENST00000417495 SEC62Q99442 399 aaKnown RBP9.73□□□□□ -0.85
SP140-204ENST00000417495 HINFPQ9BQA5 517 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 TMEM121BQ9BXQ6 578 aaPredicted RBP9.73□□□□□ -0.85
SP140-204ENST00000417495 HOMER2Q9NSB8 354 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 PCDHB9Q9Y5E1 797 aa9.73□□□□□ -0.85
SP140-204ENST00000417495 ZNF213O14771 459 aa9.72□□□□□ -0.85
SP140-204ENST00000417495 ZBTB39O15060 712 aa9.72□□□□□ -0.85
SP140-204ENST00000417495 MAP7Q14244 749 aa9.72□□□□□ -0.85
SP140-204ENST00000417495 KIAA0907Q7Z7F0 614 aaPredicted RBP9.72□□□□□ -0.85
SP140-204ENST00000417495 RNF41Q9H4P4 317 aaPredicted RBP9.72□□□□□ -0.85
SP140-204ENST00000417495 TIMM22Q9Y584 194 aa9.72□□□□□ -0.85
SP140-204ENST00000417495 TMEM247A6NEH6 219 aa9.72□□□□□ -0.85
SP140-204ENST00000417495 ABLIM1O14639 778 aa9.72□□□□□ -0.85
SP140-204ENST00000417495 KCNQ2O43526 872 aa9.72□□□□□ -0.85
SP140-204ENST00000417495 NDUFB5O43674 189 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms