RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 IL27Q8NEV9 243 aa12.5□□□□□ -0.41
TM9SF4-203ENST00000417389 AFAP1L1Q8TED9 768 aa12.5□□□□□ -0.41
TM9SF4-203ENST00000417389 GJA10Q969M2 543 aa12.5□□□□□ -0.41
TM9SF4-203ENST00000417389 TMX3Q96JJ7 454 aa12.5□□□□□ -0.41
TM9SF4-203ENST00000417389 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.5□□□□□ -0.41
TM9SF4-203ENST00000417389 EMSYQ7Z589 1322 aa12.5□□□□□ -0.41
TM9SF4-203ENST00000417389 NRCAMQ92823 1304 aa12.5□□□□□ -0.41
TM9SF4-203ENST00000417389 LTBP2Q14767 1821 aa12.5□□□□□ -0.41
TM9SF4-203ENST00000417389 POTEB3A0JP26 581 aa12.49□□□□□ -0.41
TM9SF4-203ENST00000417389 FAM205CA6NFA0 338 aa12.49□□□□□ -0.41
TM9SF4-203ENST00000417389 WDR64B1ANS9 1081 aa12.49□□□□□ -0.41
TM9SF4-203ENST00000417389 IQCF3P0C7M6 154 aa12.49□□□□□ -0.41
TM9SF4-203ENST00000417389 CKBP12277 381 aa12.49□□□□□ -0.41
TM9SF4-203ENST00000417389 ACTN1P12814 892 aa12.49□□□□□ -0.41
TM9SF4-203ENST00000417389 GCFC2P16383 781 aaKnown RBP12.49□□□□□ -0.41
TM9SF4-203ENST00000417389 FXR1P51114 621 aaKnown RBP eCLIP12.49□□□□□ -0.41
TM9SF4-203ENST00000417389 Q4G0T1 1027 aa12.49□□□□□ -0.41
TM9SF4-203ENST00000417389 POTEBQ6S5H4 581 aa12.49□□□□□ -0.41
TM9SF4-203ENST00000417389 PLPPR4Q7Z2D5 763 aa12.49□□□□□ -0.41
TM9SF4-203ENST00000417389 MIER3Q7Z3K6 550 aa12.49□□□□□ -0.41
TM9SF4-203ENST00000417389 RSPH3Q86UC2 560 aa12.49□□□□□ -0.41
TM9SF4-203ENST00000417389 SMAP1Q8IYB5 467 aaPredicted RBP12.49□□□□□ -0.41
TM9SF4-203ENST00000417389 LMBR1Q8WVP7 490 aa12.49□□□□□ -0.41
TM9SF4-203ENST00000417389 LRCH3Q96II8 777 aa12.49□□□□□ -0.41
TM9SF4-203ENST00000417389 RIT2Q99578 217 aa12.49□□□□□ -0.41
TM9SF4-203ENST00000417389 GABBR1Q9UBS5 961 aa12.49□□□□□ -0.41
TM9SF4-203ENST00000417389 TUBE1Q9UJT0 475 aa12.49□□□□□ -0.41
TM9SF4-203ENST00000417389 PCDHA10Q9Y5I2 948 aa12.49□□□□□ -0.41
TM9SF4-203ENST00000417389 CYP3A7-CYP3A51PA0A087WV96 503 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 RRN3P2A6NIE6 340 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 H3BQV1 296 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 DHX15O43143 795 aaKnown RBP12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 SLC37A4O43826 429 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 LGR5O75473 907 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 CD2BP2O95400 341 aaKnown RBP12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 BAG4O95429 457 aaKnown RBP12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 PFKMP08237 780 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 INSRRP14616 1297 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 CYP3A7P24462 503 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 RFC2P35250 354 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 SLC26A2P50443 739 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 JAK3P52333 1124 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 HIC1Q14526 733 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 PLCB4Q15147 1175 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 EARS2Q5JPH6 523 aaKnown RBP12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 TMEM240Q5SV17 173 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 ZNF618Q5T7W0 954 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 MCTP1Q6DN14 999 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 MOXD1Q6UVY6 613 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 ABHD15Q6UXT9 468 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 SERINC5Q86VE9 423 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 CCDC60Q8IWA6 550 aaPredicted RBP12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 DHX38Q92620 1227 aaKnown RBP12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 SLC5A5Q92911 643 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 LENG9Q96B70 501 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 PCYT2Q99447 389 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 FAM49AQ9H0Q0 323 aaPredicted RBP12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 UNC45AQ9H3U1 944 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 DISC1Q9NRI5 854 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 SMC3Q9UQE7 1217 aa12.48□□□□□ -0.41
TM9SF4-203ENST00000417389 RSPH10B2B2RC85 870 aa12.47□□□□□ -0.41
TM9SF4-203ENST00000417389 SOX1O00570 391 aaPredicted RBP12.47□□□□□ -0.41
TM9SF4-203ENST00000417389 RSPH10BP0C881 870 aa12.47□□□□□ -0.41
TM9SF4-203ENST00000417389 SFNP31947 248 aa12.47□□□□□ -0.41
TM9SF4-203ENST00000417389 LRIT3Q3SXY7 679 aa12.47□□□□□ -0.41
TM9SF4-203ENST00000417389 PPP4R3AQ6IN85 833 aa12.47□□□□□ -0.41
TM9SF4-203ENST00000417389 C16orf59Q7L2K0 433 aa12.47□□□□□ -0.41
TM9SF4-203ENST00000417389 POTEDQ86YR6 584 aa12.47□□□□□ -0.41
TM9SF4-203ENST00000417389 TRAPPC12Q8WVT3 735 aa12.47□□□□□ -0.41
TM9SF4-203ENST00000417389 WNT8BQ93098 351 aa12.47□□□□□ -0.41
TM9SF4-203ENST00000417389 CTAGE1Q96RT6 745 aa12.47□□□□□ -0.41
TM9SF4-203ENST00000417389 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.47□□□□□ -0.41
TM9SF4-203ENST00000417389 M0QZ92 97 aa12.46□□□□□ -0.41
TM9SF4-203ENST00000417389 EDIL3O43854 480 aa12.46□□□□□ -0.41
TM9SF4-203ENST00000417389 HBP1O60381 514 aa12.46□□□□□ -0.41
TM9SF4-203ENST00000417389 ATG7O95352 703 aa12.46□□□□□ -0.41
TM9SF4-203ENST00000417389 PARNO95453 639 aaKnown RBP12.46□□□□□ -0.41
TM9SF4-203ENST00000417389 GJB2P29033 226 aa12.46□□□□□ -0.41
TM9SF4-203ENST00000417389 MCM7P33993 719 aa12.46□□□□□ -0.41
TM9SF4-203ENST00000417389 CALCRLQ16602 461 aa12.46□□□□□ -0.41
TM9SF4-203ENST00000417389 TAF2Q6P1X5 1199 aa12.46□□□□□ -0.41
TM9SF4-203ENST00000417389 RUFY4Q6ZNE9 571 aa12.46□□□□□ -0.41
TM9SF4-203ENST00000417389 FBXO18Q8NFZ0 1043 aa12.46□□□□□ -0.41
TM9SF4-203ENST00000417389 ATP8B4Q8TF62 1192 aa12.46□□□□□ -0.41
TM9SF4-203ENST00000417389 DNAJB3Q8WWF6 145 aa12.46□□□□□ -0.41
TM9SF4-203ENST00000417389 FAM20AQ96MK3 541 aa12.46□□□□□ -0.41
TM9SF4-203ENST00000417389 NRBP2Q9NSY0 501 aa12.46□□□□□ -0.41
TM9SF4-203ENST00000417389 NOL7Q9UMY1 257 aaKnown RBP12.46□□□□□ -0.41
TM9SF4-203ENST00000417389 SLC4A7Q9Y6M7 1214 aa12.46□□□□□ -0.41
TM9SF4-203ENST00000417389 IGKV6D-21A0A0A0MT36 114 aa12.45□□□□□ -0.42
TM9SF4-203ENST00000417389 NEMFO60524 1076 aa12.45□□□□□ -0.42
TM9SF4-203ENST00000417389 PSMD10O75832 226 aa12.45□□□□□ -0.42
TM9SF4-203ENST00000417389 KCNJ6P48051 423 aa12.45□□□□□ -0.42
TM9SF4-203ENST00000417389 PRKCEQ02156 737 aa12.45□□□□□ -0.42
TM9SF4-203ENST00000417389 NCAPH2Q6IBW4 605 aa12.45□□□□□ -0.42
TM9SF4-203ENST00000417389 SLFN12Q8IYM2 578 aa12.45□□□□□ -0.42
TM9SF4-203ENST00000417389 METTL13Q8N6R0 699 aa12.45□□□□□ -0.42
TM9SF4-203ENST00000417389 ETNPPLQ8TBG4 499 aa12.45□□□□□ -0.42
TM9SF4-203ENST00000417389 BBXQ8WY36 941 aaPredicted RBP12.45□□□□□ -0.42
TM9SF4-203ENST00000417389 HERVK_113Q902F9 699 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms