RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 CD207Q9UJ71 328 aa15.21■□□□□ 0.03
CTHRC1-202ENST00000415886 TCF7P36402 384 aaPredicted RBP15.2■□□□□ 0.02
CTHRC1-202ENST00000415886 NECTIN1Q15223 517 aa15.2■□□□□ 0.02
CTHRC1-202ENST00000415886 TAF2Q6P1X5 1199 aa15.2■□□□□ 0.02
CTHRC1-202ENST00000415886 SYNE3Q6ZMZ3 975 aa15.2■□□□□ 0.02
CTHRC1-202ENST00000415886 MB21D2Q8IYB1 491 aaPredicted RBP15.2■□□□□ 0.02
CTHRC1-202ENST00000415886 CTCFLQ8NI51 663 aaPredicted RBP15.2■□□□□ 0.02
CTHRC1-202ENST00000415886 IGDCC4Q8TDY8 1250 aa15.2■□□□□ 0.02
CTHRC1-202ENST00000415886 LINC01599Q8WXQ3 324 aa15.2■□□□□ 0.02
CTHRC1-202ENST00000415886 PHOX2BQ99453 314 aa15.2■□□□□ 0.02
CTHRC1-202ENST00000415886 MTA3Q9BTC8 594 aa15.2■□□□□ 0.02
CTHRC1-202ENST00000415886 TAF6LQ9Y6J9 622 aa15.2■□□□□ 0.02
CTHRC1-202ENST00000415886 KIAA1671Q9BY89 1806 aa15.2■□□□□ 0.02
CTHRC1-202ENST00000415886 DGKIO75912 1065 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 DNAJB1P25685 340 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 MARK3P27448 753 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 NDUFV1P49821 464 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 PPFIA1Q13136 1202 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 ADAM15Q13444 863 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 GRIK4Q16099 956 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 FBXO47Q5MNV8 452 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 PCNX4Q63HM2 1172 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 USP17L6PQ6QN14 398 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 ADGRD2Q7Z7M1 963 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 PRSS33Q8NF86 280 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 SMARCC2Q8TAQ2 1214 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 DNAJB3Q8WWF6 145 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 EDAQ92838 391 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 MSLNLQ96KJ4 702 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 NEK1Q96PY6 1258 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 SENP7Q9BQF6 1050 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 PLVAPQ9BX97 442 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 TUBE1Q9UJT0 475 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 PLAGL2Q9UPG8 496 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 CDY2AQ9Y6F7 541 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 MRPL42Q9Y6G3 142 aaKnown RBP15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 MYO7AQ13402 2215 aa15.19■□□□□ 0.02
CTHRC1-202ENST00000415886 ITGB1P05556 798 aa15.18■□□□□ 0.02
CTHRC1-202ENST00000415886 CALM1P0DP23 149 aa15.18■□□□□ 0.02
CTHRC1-202ENST00000415886 CALM2P0DP24 149 aa15.18■□□□□ 0.02
CTHRC1-202ENST00000415886 CALM3P0DP25 149 aa15.18■□□□□ 0.02
CTHRC1-202ENST00000415886 CD52P31358 61 aa15.18■□□□□ 0.02
CTHRC1-202ENST00000415886 GNAQP50148 359 aa15.18■□□□□ 0.02
CTHRC1-202ENST00000415886 TROAPQ12815 778 aa15.18■□□□□ 0.02
CTHRC1-202ENST00000415886 KRT32Q14532 448 aa15.18■□□□□ 0.02
CTHRC1-202ENST00000415886 TSHZ1Q6ZSZ6 1077 aa15.18■□□□□ 0.02
CTHRC1-202ENST00000415886 RSPH3Q86UC2 560 aa15.18■□□□□ 0.02
CTHRC1-202ENST00000415886 ZBTB10Q96DT7 871 aa15.18■□□□□ 0.02
CTHRC1-202ENST00000415886 LZTS2Q9BRK4 669 aa15.18■□□□□ 0.02
CTHRC1-202ENST00000415886 AGO3Q9H9G7 860 aaKnown RBP15.18■□□□□ 0.02
CTHRC1-202ENST00000415886 PPP4R2Q9NY27 417 aa15.18■□□□□ 0.02
CTHRC1-202ENST00000415886 SLC12A7Q9Y666 1083 aa15.18■□□□□ 0.02
CTHRC1-202ENST00000415886 BAZ2BQ9UIF8 2168 aaKnown RBP15.18■□□□□ 0.02
CTHRC1-202ENST00000415886 ZNF318Q5VUA4 2279 aa15.18■□□□□ 0.02
CTHRC1-202ENST00000415886 MBLAC1A4D2B0 266 aaPredicted RBP15.17■□□□□ 0.02
CTHRC1-202ENST00000415886 ATP9AO75110 1047 aa15.17■□□□□ 0.02
CTHRC1-202ENST00000415886 KCNA2P16389 499 aa15.17■□□□□ 0.02
CTHRC1-202ENST00000415886 ANTXR2P58335 489 aa15.17■□□□□ 0.02
CTHRC1-202ENST00000415886 FGD1P98174 961 aa15.17■□□□□ 0.02
CTHRC1-202ENST00000415886 PAN2Q504Q3 1202 aaKnown RBP15.17■□□□□ 0.02
CTHRC1-202ENST00000415886 MARCH8Q5T0T0 291 aa15.17■□□□□ 0.02
CTHRC1-202ENST00000415886 IER5LQ5T953 404 aa15.17■□□□□ 0.02
CTHRC1-202ENST00000415886 ERICH6BQ5W0A0 696 aa15.17■□□□□ 0.02
CTHRC1-202ENST00000415886 NLRX1Q86UT6 975 aa15.17■□□□□ 0.02
CTHRC1-202ENST00000415886 P2RX5Q93086 422 aa15.17■□□□□ 0.02
CTHRC1-202ENST00000415886 MAP3K14Q99558 947 aa15.17■□□□□ 0.02
CTHRC1-202ENST00000415886 PKD2L1Q9P0L9 805 aa15.17■□□□□ 0.02
CTHRC1-202ENST00000415886 CLEC1BQ9P126 229 aa15.17■□□□□ 0.02
CTHRC1-202ENST00000415886 SEC63Q9UGP8 760 aaKnown RBP15.17■□□□□ 0.02
CTHRC1-202ENST00000415886 TTC3P53804 2025 aa15.17■□□□□ 0.02
CTHRC1-202ENST00000415886 PIEZO1Q92508 2521 aa15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 GSTTP1A0A1W2PQM5 241 aa15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 TMEM221A6NGB7 291 aa15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 M0R296 226 aa15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 MEIS2O14770 477 aa15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 DDAH1O94760 285 aa15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 EYA4O95677 639 aa15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 IGBP1P78318 339 aa15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 MRPS6P82932 125 aaKnown RBP15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 XRRA1Q6P2D8 792 aa15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 TRIM67Q6ZTA4 783 aa15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 RTN4RL1Q86UN2 441 aaPredicted RBP15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 CMTR2Q8IYT2 770 aaKnown RBP15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 ZNF654Q8IZM8 581 aa15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 KLHL23Q8NBE8 558 aa15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 SMRP1Q8NCR6 262 aa15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 GIMAP8Q8ND71 665 aaPredicted RBP15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 SPPL3Q8TCT6 385 aa15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 CUL5Q93034 780 aa15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 PPP2R3CQ969Q6 453 aa15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 RRP36Q96EU6 259 aaKnown RBP15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 FAM49AQ9H0Q0 323 aaPredicted RBP15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 LY9Q9HBG7 655 aa15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 ERAP1Q9NZ08 941 aa15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 BARX2Q9UMQ3 279 aaPredicted RBP15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 PCDHGC5Q9Y5F6 944 aa15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 KAT6AQ92794 2004 aa15.16■□□□□ 0.02
CTHRC1-202ENST00000415886 TECTAO75443 2155 aa15.15■□□□□ 0.02
CTHRC1-202ENST00000415886 LOC730098B7Z3J9 87 aa15.15■□□□□ 0.02
CTHRC1-202ENST00000415886 SH2B2O14492 632 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms