RNA–Protein interactions for RNA: ENST00000411642.6

TTC39A-207, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best)

Gene TTC39A, Length 931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-207ENST00000411642 PDLIM7Q9NR12 457 aa11.35□□□□□ -0.59
TTC39A-207ENST00000411642 DISC1Q9NRI5 854 aa11.35□□□□□ -0.59
TTC39A-207ENST00000411642 TRMT13Q9NUP7 481 aaKnown RBP11.35□□□□□ -0.59
TTC39A-207ENST00000411642 HDAC6Q9UBN7 1215 aa11.35□□□□□ -0.59
TTC39A-207ENST00000411642 PRKAG2Q9UGJ0 569 aa11.35□□□□□ -0.59
TTC39A-207ENST00000411642 GTF2IRD1Q9UHL9 959 aa11.35□□□□□ -0.59
TTC39A-207ENST00000411642 VAV3Q9UKW4 847 aa11.35□□□□□ -0.59
TTC39A-207ENST00000411642 ZMYND8Q9ULU4 1186 aaPredicted RBP11.35□□□□□ -0.59
TTC39A-207ENST00000411642 MTMR6Q9Y217 621 aa11.35□□□□□ -0.59
TTC39A-207ENST00000411642 PCDHB6Q9Y5E3 794 aa11.35□□□□□ -0.59
TTC39A-207ENST00000411642 CD4P01730 458 aa11.34□□□□□ -0.59
TTC39A-207ENST00000411642 OR52Z1P0C646 297 aa11.34□□□□□ -0.59
TTC39A-207ENST00000411642 SMIM10L2AP0DMW4 78 aa11.34□□□□□ -0.59
TTC39A-207ENST00000411642 SMIM10L2BP0DMW5 78 aa11.34□□□□□ -0.59
TTC39A-207ENST00000411642 SYN1P17600 705 aa11.34□□□□□ -0.59
TTC39A-207ENST00000411642 TXKP42681 527 aa11.34□□□□□ -0.59
TTC39A-207ENST00000411642 FAAP100Q0VG06 881 aa11.34□□□□□ -0.59
TTC39A-207ENST00000411642 RESTQ13127 1097 aa11.34□□□□□ -0.59
TTC39A-207ENST00000411642 PPP2R5CQ13362 524 aa11.34□□□□□ -0.59
TTC39A-207ENST00000411642 GDF6Q6KF10 455 aaPredicted RBP11.34□□□□□ -0.59
TTC39A-207ENST00000411642 PDXDC2PQ6P474 469 aa11.34□□□□□ -0.59
TTC39A-207ENST00000411642 PLPPR4Q7Z2D5 763 aa11.34□□□□□ -0.59
TTC39A-207ENST00000411642 SH3RF1Q7Z6J0 888 aa11.34□□□□□ -0.59
TTC39A-207ENST00000411642 RDM1Q8NG50 284 aa11.34□□□□□ -0.59
TTC39A-207ENST00000411642 AFAP1L1Q8TED9 768 aa11.34□□□□□ -0.59
TTC39A-207ENST00000411642 MTMR9Q96QG7 549 aa11.34□□□□□ -0.59
TTC39A-207ENST00000411642 RNPEPQ9H4A4 650 aa11.34□□□□□ -0.59
TTC39A-207ENST00000411642 TTC12Q9H892 705 aaPredicted RBP11.34□□□□□ -0.59
TTC39A-207ENST00000411642 TMEM39AQ9NV64 488 aa11.34□□□□□ -0.59
TTC39A-207ENST00000411642 GABBR1Q9UBS5 961 aa11.34□□□□□ -0.59
TTC39A-207ENST00000411642 PCDHA12Q9UN75 941 aa11.34□□□□□ -0.59
TTC39A-207ENST00000411642 TRPC6Q9Y210 931 aa11.34□□□□□ -0.59
TTC39A-207ENST00000411642 NOD1Q9Y239 953 aa11.34□□□□□ -0.59
TTC39A-207ENST00000411642 IGSF9BQ9UPX0 1349 aa11.34□□□□□ -0.59
TTC39A-207ENST00000411642 TET1Q8NFU7 2136 aa11.33□□□□□ -0.6
TTC39A-207ENST00000411642 SIP14410 1827 aa11.33□□□□□ -0.6
TTC39A-207ENST00000411642 RANBP2P49792 3224 aaKnown RBP11.33□□□□□ -0.6
TTC39A-207ENST00000411642 C17orf102A2RUQ5 167 aa11.33□□□□□ -0.6
TTC39A-207ENST00000411642 H0YGN5 161 aa11.33□□□□□ -0.6
TTC39A-207ENST00000411642 EML1O00423 815 aa11.33□□□□□ -0.6
TTC39A-207ENST00000411642 SLC26A2P50443 739 aa11.33□□□□□ -0.6
TTC39A-207ENST00000411642 SPIRE1Q08AE8 756 aa11.33□□□□□ -0.6
TTC39A-207ENST00000411642 PPFIA1Q13136 1202 aa11.33□□□□□ -0.6
TTC39A-207ENST00000411642 HIC1Q14526 733 aa11.33□□□□□ -0.6
TTC39A-207ENST00000411642 PLCB4Q15147 1175 aa11.33□□□□□ -0.6
TTC39A-207ENST00000411642 PTGISQ16647 500 aa11.33□□□□□ -0.6
TTC39A-207ENST00000411642 NCAPH2Q6IBW4 605 aa11.33□□□□□ -0.6
TTC39A-207ENST00000411642 CKAP2LQ8IYA6 745 aa11.33□□□□□ -0.6
TTC39A-207ENST00000411642 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.33□□□□□ -0.6
TTC39A-207ENST00000411642 PCDH10Q9P2E7 1040 aa11.33□□□□□ -0.6
TTC39A-207ENST00000411642 TBX21Q9UL17 535 aa11.33□□□□□ -0.6
TTC39A-207ENST00000411642 MAFBQ9Y5Q3 323 aaPredicted RBP11.33□□□□□ -0.6
TTC39A-207ENST00000411642 TRIOBPQ9H2D6 2365 aa11.33□□□□□ -0.6
TTC39A-207ENST00000411642 POTEB3A0JP26 581 aa11.32□□□□□ -0.6
TTC39A-207ENST00000411642 TRIM43BA6NCK2 446 aa11.32□□□□□ -0.6
TTC39A-207ENST00000411642 POTEMA6NI47 508 aa11.32□□□□□ -0.6
TTC39A-207ENST00000411642 KIAA0355O15063 1070 aa11.32□□□□□ -0.6
TTC39A-207ENST00000411642 CYP2C9P11712 490 aa11.32□□□□□ -0.6
TTC39A-207ENST00000411642 PDIA4P13667 645 aaKnown RBP11.32□□□□□ -0.6
TTC39A-207ENST00000411642 HOXC8P31273 242 aa11.32□□□□□ -0.6
TTC39A-207ENST00000411642 ZNF200P98182 395 aaPredicted RBP11.32□□□□□ -0.6
TTC39A-207ENST00000411642 PTGDRQ13258 359 aa11.32□□□□□ -0.6
TTC39A-207ENST00000411642 GRIK4Q16099 956 aa11.32□□□□□ -0.6
TTC39A-207ENST00000411642 UGCGQ16739 394 aa11.32□□□□□ -0.6
TTC39A-207ENST00000411642 POTEBQ6S5H4 581 aa11.32□□□□□ -0.6
TTC39A-207ENST00000411642 TRMT1LQ7Z2T5 733 aaKnown RBP11.32□□□□□ -0.6
TTC39A-207ENST00000411642 C4orf32Q8N8J7 132 aa11.32□□□□□ -0.6
TTC39A-207ENST00000411642 ATP8B4Q8TF62 1192 aa11.32□□□□□ -0.6
TTC39A-207ENST00000411642 LMBR1Q8WVP7 490 aa11.32□□□□□ -0.6
TTC39A-207ENST00000411642 TNPO1Q92973 898 aaKnown RBP11.32□□□□□ -0.6
TTC39A-207ENST00000411642 ATP6V0A1Q93050 837 aa11.32□□□□□ -0.6
TTC39A-207ENST00000411642 TRIM43Q96BQ3 446 aaPredicted RBP11.32□□□□□ -0.6
TTC39A-207ENST00000411642 CTAGE1Q96RT6 745 aa11.32□□□□□ -0.6
TTC39A-207ENST00000411642 ZSCAN16Q9H4T2 348 aaPredicted RBP11.32□□□□□ -0.6
TTC39A-207ENST00000411642 SETD4Q9NVD3 440 aa11.32□□□□□ -0.6
TTC39A-207ENST00000411642 NRCAMQ92823 1304 aa11.32□□□□□ -0.6
TTC39A-207ENST00000411642 LAD1O00515 517 aa11.31□□□□□ -0.6
TTC39A-207ENST00000411642 TREHO43280 583 aa11.31□□□□□ -0.6
TTC39A-207ENST00000411642 ZNF862O60290 1169 aa11.31□□□□□ -0.6
TTC39A-207ENST00000411642 HBP1O60381 514 aa11.31□□□□□ -0.6
TTC39A-207ENST00000411642 OATP04181 439 aa11.31□□□□□ -0.6
TTC39A-207ENST00000411642 GNAT1P11488 350 aa11.31□□□□□ -0.6
TTC39A-207ENST00000411642 INSRRP14616 1297 aa11.31□□□□□ -0.6
TTC39A-207ENST00000411642 RAG1P15918 1043 aa11.31□□□□□ -0.6
TTC39A-207ENST00000411642 ATP4AP20648 1035 aa11.31□□□□□ -0.6
TTC39A-207ENST00000411642 TECP42680 631 aa11.31□□□□□ -0.6
TTC39A-207ENST00000411642 IGBP1P78318 339 aa11.31□□□□□ -0.6
TTC39A-207ENST00000411642 PRKCEQ02156 737 aa11.31□□□□□ -0.6
TTC39A-207ENST00000411642 PKP1Q13835 747 aa11.31□□□□□ -0.6
TTC39A-207ENST00000411642 EPHA7Q15375 998 aa11.31□□□□□ -0.6
TTC39A-207ENST00000411642 TMEM266Q2M3C6 531 aa11.31□□□□□ -0.6
TTC39A-207ENST00000411642 FOXD4L5Q5VV16 416 aaPredicted RBP11.31□□□□□ -0.6
TTC39A-207ENST00000411642 FAM173BQ6P4H8 233 aa11.31□□□□□ -0.6
TTC39A-207ENST00000411642 BANK1Q8NDB2 785 aa11.31□□□□□ -0.6
TTC39A-207ENST00000411642 FOXD4L4Q8WXT5 416 aaPredicted RBP11.31□□□□□ -0.6
TTC39A-207ENST00000411642 FAM167AQ96KS9 214 aa11.31□□□□□ -0.6
TTC39A-207ENST00000411642 PPP1R12CQ9BZL4 782 aa11.31□□□□□ -0.6
TTC39A-207ENST00000411642 HIPK3Q9H422 1215 aa11.31□□□□□ -0.6
TTC39A-207ENST00000411642 MYH11P35749 1972 aa11.3□□□□□ -0.6
TTC39A-207ENST00000411642 COL1A2P08123 1366 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms