RNA–Protein interactions for RNA: ENST00000403160.4

COPS9-202, Transcript of COP9 signalosome subunit 9, humanhuman

TSL 2

Gene COPS9, Length 609 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9-202ENST00000403160 PPP1R12CQ9BZL4 782 aa18.23■□□□□ 0.51
COPS9-202ENST00000403160 TMEM265A0A087WTH1 108 aa18.22■□□□□ 0.51
COPS9-202ENST00000403160 FAM237AA0A1B0GTK4 181 aa18.22■□□□□ 0.51
COPS9-202ENST00000403160 CCNT1O60563 726 aaKnown RBP18.22■□□□□ 0.51
COPS9-202ENST00000403160 TGFB3P10600 412 aa18.22■□□□□ 0.51
COPS9-202ENST00000403160 CHMP4BP1P59074 171 aa18.22■□□□□ 0.51
COPS9-202ENST00000403160 DGKDQ16760 1214 aa18.22■□□□□ 0.51
COPS9-202ENST00000403160 SPECC1Q5M775 1068 aa18.22■□□□□ 0.51
COPS9-202ENST00000403160 MCTP2Q6DN12 878 aa18.22■□□□□ 0.51
COPS9-202ENST00000403160 NFRKBQ6P4R8 1299 aa18.22■□□□□ 0.51
COPS9-202ENST00000403160 FMR1NBQ8N0W7 255 aaPredicted RBP18.22■□□□□ 0.51
COPS9-202ENST00000403160 TMEM199Q8N511 208 aa18.22■□□□□ 0.51
COPS9-202ENST00000403160 ZNF579Q8NAF0 562 aaKnown RBP18.22■□□□□ 0.51
COPS9-202ENST00000403160 PPTC7Q8NI37 304 aa18.22■□□□□ 0.51
COPS9-202ENST00000403160 RNPC3Q96LT9 517 aaKnown RBP18.22■□□□□ 0.51
COPS9-202ENST00000403160 CDX2Q99626 313 aaPredicted RBP18.22■□□□□ 0.51
COPS9-202ENST00000403160 CSRNP2Q9H175 543 aa18.22■□□□□ 0.51
COPS9-202ENST00000403160 HIPK3Q9H422 1215 aa18.22■□□□□ 0.51
COPS9-202ENST00000403160 EDIL3O43854 480 aa18.21■□□□□ 0.51
COPS9-202ENST00000403160 KINO60870 393 aaKnown RBP18.21■□□□□ 0.51
COPS9-202ENST00000403160 LETM1O95202 739 aaPredicted RBP18.21■□□□□ 0.51
COPS9-202ENST00000403160 GGPS1O95749 300 aa18.21■□□□□ 0.51
COPS9-202ENST00000403160 SUPT20HL2P0C7V6 817 aa18.21■□□□□ 0.51
COPS9-202ENST00000403160 MRPS9P82933 396 aaKnown RBP18.21■□□□□ 0.51
COPS9-202ENST00000403160 ORC2Q13416 577 aaPredicted RBP18.21■□□□□ 0.51
COPS9-202ENST00000403160 CAMK4Q16566 473 aa18.21■□□□□ 0.51
COPS9-202ENST00000403160 CELF3Q5SZQ8 465 aaKnown RBP18.21■□□□□ 0.51
COPS9-202ENST00000403160 PCNX4Q63HM2 1172 aa18.21■□□□□ 0.51
COPS9-202ENST00000403160 XRRA1Q6P2D8 792 aa18.21■□□□□ 0.51
COPS9-202ENST00000403160 TMEM60Q9H2L4 133 aa18.21■□□□□ 0.51
COPS9-202ENST00000403160 TNMDQ9H2S6 317 aa18.21■□□□□ 0.51
COPS9-202ENST00000403160 TRMT13Q9NUP7 481 aaKnown RBP18.21■□□□□ 0.51
COPS9-202ENST00000403160 HPSEQ9Y251 543 aa18.21■□□□□ 0.51
COPS9-202ENST00000403160 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.2■□□□□ 0.5
COPS9-202ENST00000403160 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.2■□□□□ 0.5
COPS9-202ENST00000403160 VWA3AA6NCI4 1184 aa18.2■□□□□ 0.5
COPS9-202ENST00000403160 SPDYE3A6NKU9 549 aa18.2■□□□□ 0.5
COPS9-202ENST00000403160 SORBS3O60504 671 aa18.2■□□□□ 0.5
COPS9-202ENST00000403160 TDP2O95551 362 aa18.2■□□□□ 0.5
COPS9-202ENST00000403160 FOSP01100 380 aaPredicted RBP18.2■□□□□ 0.5
COPS9-202ENST00000403160 UBA1P22314 1058 aaKnown RBP18.2■□□□□ 0.5
COPS9-202ENST00000403160 CYP2C18P33260 490 aa18.2■□□□□ 0.5
COPS9-202ENST00000403160 EPHB4P54760 987 aa18.2■□□□□ 0.5
COPS9-202ENST00000403160 PTPN11Q06124 597 aaPredicted RBP18.2■□□□□ 0.5
COPS9-202ENST00000403160 PPIGQ13427 754 aaKnown RBP eCLIP18.2■□□□□ 0.5
COPS9-202ENST00000403160 ARL6IP4Q66PJ3 421 aaKnown RBP18.2■□□□□ 0.5
COPS9-202ENST00000403160 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.2■□□□□ 0.5
COPS9-202ENST00000403160 SPATA33Q96N06 139 aa18.2■□□□□ 0.5
COPS9-202ENST00000403160 INPP4AQ96PE3 977 aaPredicted RBP18.2■□□□□ 0.5
COPS9-202ENST00000403160 MLXIPQ9HAP2 919 aa18.2■□□□□ 0.5
COPS9-202ENST00000403160 FAM13BQ9NYF5 915 aa18.2■□□□□ 0.5
COPS9-202ENST00000403160 NEMFO60524 1076 aa18.19■□□□□ 0.5
COPS9-202ENST00000403160 OR52Z1P0C646 297 aa18.19■□□□□ 0.5
COPS9-202ENST00000403160 CSF2RAP15509 400 aa18.19■□□□□ 0.5
COPS9-202ENST00000403160 ICAM3P32942 547 aa18.19■□□□□ 0.5
COPS9-202ENST00000403160 SYKP43405 635 aa18.19■□□□□ 0.5
COPS9-202ENST00000403160 SP2Q02086 613 aa18.19■□□□□ 0.5
COPS9-202ENST00000403160 IL17AQ16552 155 aa18.19■□□□□ 0.5
COPS9-202ENST00000403160 LRSAM1Q6UWE0 723 aa18.19■□□□□ 0.5
COPS9-202ENST00000403160 GAS2L3Q86XJ1 694 aa18.19■□□□□ 0.5
COPS9-202ENST00000403160 TEX2Q8IWB9 1127 aa18.19■□□□□ 0.5
COPS9-202ENST00000403160 PPP1R13LQ8WUF5 828 aa18.19■□□□□ 0.5
COPS9-202ENST00000403160 NOC4LQ9BVI4 516 aaKnown RBP18.19■□□□□ 0.5
COPS9-202ENST00000403160 EHMT1Q9H9B1 1298 aa18.19■□□□□ 0.5
COPS9-202ENST00000403160 SPATA31C2B4DYI2 1134 aa18.18■□□□□ 0.5
COPS9-202ENST00000403160 LAD1O00515 517 aa18.18■□□□□ 0.5
COPS9-202ENST00000403160 ZNF202O95125 648 aa18.18■□□□□ 0.5
COPS9-202ENST00000403160 ZNF286BP0CG31 522 aa18.18■□□□□ 0.5
COPS9-202ENST00000403160 PRPHP41219 470 aa18.18■□□□□ 0.5
COPS9-202ENST00000403160 NEDD9Q14511 834 aa18.18■□□□□ 0.5
COPS9-202ENST00000403160 NLRX1Q86UT6 975 aa18.18■□□□□ 0.5
COPS9-202ENST00000403160 POTEDQ86YR6 584 aa18.18■□□□□ 0.5
COPS9-202ENST00000403160 KAT2BQ92831 832 aa18.18■□□□□ 0.5
COPS9-202ENST00000403160 NAP1L4Q99733 375 aaKnown RBP18.18■□□□□ 0.5
COPS9-202ENST00000403160 KATNAL1Q9BW62 490 aa18.18■□□□□ 0.5
COPS9-202ENST00000403160 TTYH1Q9H313 450 aaPredicted RBP18.18■□□□□ 0.5
COPS9-202ENST00000403160 NOD1Q9Y239 953 aa18.18■□□□□ 0.5
COPS9-202ENST00000403160 SLC37A4O43826 429 aa18.17■□□□□ 0.5
COPS9-202ENST00000403160 PPFIA4O75335 1185 aa18.17■□□□□ 0.5
COPS9-202ENST00000403160 CYP2C9P11712 490 aa18.17■□□□□ 0.5
COPS9-202ENST00000403160 GCFC2P16383 781 aaKnown RBP18.17■□□□□ 0.5
COPS9-202ENST00000403160 SREBF1P36956 1147 aa18.17■□□□□ 0.5
COPS9-202ENST00000403160 HSDL1Q3SXM5 330 aa18.17■□□□□ 0.5
COPS9-202ENST00000403160 DTHD1Q6ZMT9 781 aa18.17■□□□□ 0.5
COPS9-202ENST00000403160 USP49Q70CQ1 688 aa18.17■□□□□ 0.5
COPS9-202ENST00000403160 SYMPKQ92797 1274 aaKnown RBP18.17■□□□□ 0.5
COPS9-202ENST00000403160 KCNH3Q9ULD8 1083 aa18.17■□□□□ 0.5
COPS9-202ENST00000403160 UMODL1Q5DID0 1318 aa18.17■□□□□ 0.5
COPS9-202ENST00000403160 GOLGA6L3A6NEY3 463 aa18.16■□□□□ 0.5
COPS9-202ENST00000403160 NOP56O00567 594 aaKnown RBP18.16■□□□□ 0.5
COPS9-202ENST00000403160 HOXD8P13378 290 aaPredicted RBP18.16■□□□□ 0.5
COPS9-202ENST00000403160 LONP1P36776 959 aaKnown RBP18.16■□□□□ 0.5
COPS9-202ENST00000403160 PSEN2P49810 448 aa18.16■□□□□ 0.5
COPS9-202ENST00000403160 USP11P51784 963 aa18.16■□□□□ 0.5
COPS9-202ENST00000403160 CCL23P55773 120 aa18.16■□□□□ 0.5
COPS9-202ENST00000403160 ARHGAP4P98171 946 aa18.16■□□□□ 0.5
COPS9-202ENST00000403160 MFSD10Q14728 455 aa18.16■□□□□ 0.5
COPS9-202ENST00000403160 CALCRLQ16602 461 aa18.16■□□□□ 0.5
COPS9-202ENST00000403160 PPP4R3AQ6IN85 833 aa18.16■□□□□ 0.5
COPS9-202ENST00000403160 PSRC1Q6PGN9 363 aaPredicted RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms