RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 HOXA13P31271 388 aaPredicted RBP21.44■■□□□ 1.02
COL13A1-205ENST00000398978 IKQ13123 557 aaPredicted RBP21.44■■□□□ 1.02
COL13A1-205ENST00000398978 EMBQ6PCB8 327 aa21.44■■□□□ 1.02
COL13A1-205ENST00000398978 KSR1Q8IVT5 923 aa21.44■■□□□ 1.02
COL13A1-205ENST00000398978 TBC1D22AQ8WUA7 517 aa21.44■■□□□ 1.02
COL13A1-205ENST00000398978 SH3GL2Q99962 352 aa21.44■■□□□ 1.02
COL13A1-205ENST00000398978 DHX36Q9H2U1 1008 aaKnown RBP21.44■■□□□ 1.02
COL13A1-205ENST00000398978 EEF2P13639 858 aaKnown RBP21.43■■□□□ 1.02
COL13A1-205ENST00000398978 HOXD13P35453 343 aa21.43■■□□□ 1.02
COL13A1-205ENST00000398978 ITIH3Q06033 890 aa21.43■■□□□ 1.02
COL13A1-205ENST00000398978 CDC37Q16543 378 aaPredicted RBP21.43■■□□□ 1.02
COL13A1-205ENST00000398978 MEI1Q5TIA1 1274 aa21.43■■□□□ 1.02
COL13A1-205ENST00000398978 IFT20Q8IY31 132 aa21.43■■□□□ 1.02
COL13A1-205ENST00000398978 OR2W6PQ8NHA6 318 aa21.43■■□□□ 1.02
COL13A1-205ENST00000398978 REEP2Q9BRK0 252 aa21.43■■□□□ 1.02
COL13A1-205ENST00000398978 NT5C3AQ9H0P0 336 aa21.43■■□□□ 1.02
COL13A1-205ENST00000398978 DNAJC18Q9H819 358 aa21.43■■□□□ 1.02
COL13A1-205ENST00000398978 ATF5Q9Y2D1 282 aaPredicted RBP21.43■■□□□ 1.02
COL13A1-205ENST00000398978 RGL2O15211 777 aa21.43■■□□□ 1.02
COL13A1-205ENST00000398978 CEP104O60308 925 aa21.43■■□□□ 1.02
COL13A1-205ENST00000398978 SHOX2O60902 331 aaPredicted RBP21.43■■□□□ 1.02
COL13A1-205ENST00000398978 LIG3P49916 1009 aa21.43■■□□□ 1.02
COL13A1-205ENST00000398978 SLC12A3P55017 1021 aa21.43■■□□□ 1.02
COL13A1-205ENST00000398978 CORO7P57737 925 aa21.43■■□□□ 1.02
COL13A1-205ENST00000398978 GUCY1A3Q02108 690 aa21.43■■□□□ 1.02
COL13A1-205ENST00000398978 DDR1Q08345 913 aa21.43■■□□□ 1.02
COL13A1-205ENST00000398978 HLTFQ14527 1009 aaKnown RBP eCLIP21.43■■□□□ 1.02
COL13A1-205ENST00000398978 VPS72Q15906 364 aa21.43■■□□□ 1.02
COL13A1-205ENST00000398978 CRY2Q49AN0 593 aa21.43■■□□□ 1.02
COL13A1-205ENST00000398978 CFAP58Q5T655 872 aa21.43■■□□□ 1.02
COL13A1-205ENST00000398978 RBM46Q8TBY0 533 aaKnown RBP21.43■■□□□ 1.02
COL13A1-205ENST00000398978 TMCO5BA8MYB1 307 aa21.42■■□□□ 1.02
COL13A1-205ENST00000398978 CEP63Q96MT8 703 aa21.42■■□□□ 1.02
COL13A1-205ENST00000398978 BCS1LQ9Y276 419 aa21.42■■□□□ 1.02
COL13A1-205ENST00000398978 PCDHB13Q9Y5F0 798 aa21.42■■□□□ 1.02
COL13A1-205ENST00000398978 MYH4Q9Y623 1939 aa21.42■■□□□ 1.02
COL13A1-205ENST00000398978 GOLGA8KD6RF30 607 aa21.42■■□□□ 1.02
COL13A1-205ENST00000398978 OPA1O60313 960 aa21.42■■□□□ 1.02
COL13A1-205ENST00000398978 GDF11O95390 407 aa21.42■■□□□ 1.02
COL13A1-205ENST00000398978 SAMD1Q6SPF0 538 aaPredicted RBP21.42■■□□□ 1.02
COL13A1-205ENST00000398978 CERS3Q8IU89 383 aa21.42■■□□□ 1.02
COL13A1-205ENST00000398978 INPP4AQ96PE3 977 aaPredicted RBP21.42■■□□□ 1.02
COL13A1-205ENST00000398978 RGL1Q9NZL6 768 aa21.42■■□□□ 1.02
COL13A1-205ENST00000398978 AKAP3O75969 853 aa21.42■■□□□ 1.02
COL13A1-205ENST00000398978 GDF3Q9NR23 364 aa21.42■■□□□ 1.02
COL13A1-205ENST00000398978 ZBTB39O15060 712 aa21.41■■□□□ 1.02
COL13A1-205ENST00000398978 UCHL3P15374 230 aa21.41■■□□□ 1.02
COL13A1-205ENST00000398978 GIT2Q14161 759 aa21.41■■□□□ 1.02
COL13A1-205ENST00000398978 IRF2BP2Q7Z5L9 587 aa21.41■■□□□ 1.02
COL13A1-205ENST00000398978 MICALL1Q8N3F8 863 aa21.41■■□□□ 1.02
COL13A1-205ENST00000398978 PIK3R5Q8WYR1 880 aa21.41■■□□□ 1.02
COL13A1-205ENST00000398978 ARMCX3Q9UH62 379 aaPredicted RBP21.41■■□□□ 1.02
COL13A1-205ENST00000398978 ARFGEF1Q9Y6D6 1849 aa21.41■■□□□ 1.02
COL13A1-205ENST00000398978 KDM3AQ9Y4C1 1321 aa21.41■■□□□ 1.02
COL13A1-205ENST00000398978 ADAMTSL1Q8N6G6 1762 aa21.41■■□□□ 1.02
COL13A1-205ENST00000398978 EIF3HO15372 352 aaKnown RBP eCLIP21.41■■□□□ 1.02
COL13A1-205ENST00000398978 MAGEA9P43362 315 aa21.41■■□□□ 1.02
COL13A1-205ENST00000398978 MAATS1Q7Z4T9 603 aa21.41■■□□□ 1.02
COL13A1-205ENST00000398978 KIAA0825Q8IV33 1275 aa21.41■■□□□ 1.02
COL13A1-205ENST00000398978 PIGOQ8TEQ8 1089 aa21.41■■□□□ 1.02
COL13A1-205ENST00000398978 RNPC3Q96LT9 517 aaKnown RBP21.41■■□□□ 1.02
COL13A1-205ENST00000398978 EDEM3Q9BZQ6 932 aa21.41■■□□□ 1.02
COL13A1-205ENST00000398978 FAM107BQ9H098 131 aa21.41■■□□□ 1.02
COL13A1-205ENST00000398978 BHMT2Q9H2M3 363 aa21.41■■□□□ 1.02
COL13A1-205ENST00000398978 KCNMB3Q9NPA1 279 aa21.41■■□□□ 1.02
COL13A1-205ENST00000398978 FAM86B1E9PN63 330 aa21.4■■□□□ 1.02
COL13A1-205ENST00000398978 MEIS2O14770 477 aa21.4■■□□□ 1.02
COL13A1-205ENST00000398978 FAM86B2P0C5J1 330 aa21.4■■□□□ 1.02
COL13A1-205ENST00000398978 RBM5P52756 815 aaKnown RBP eCLIP21.4■■□□□ 1.02
COL13A1-205ENST00000398978 ARHGAP4P98171 946 aa21.4■■□□□ 1.02
COL13A1-205ENST00000398978 SLFN13Q68D06 897 aa21.4■■□□□ 1.02
COL13A1-205ENST00000398978 CAVIN3Q969G5 261 aa21.4■■□□□ 1.02
COL13A1-205ENST00000398978 PCDHGC5Q9Y5F6 944 aa21.4■■□□□ 1.02
COL13A1-205ENST00000398978 SMCHD1A6NHR9 2005 aa21.4■■□□□ 1.02
COL13A1-205ENST00000398978 HPDP32754 393 aaPredicted RBP21.4■■□□□ 1.02
COL13A1-205ENST00000398978 SEPT2Q15019 361 aa21.4■■□□□ 1.02
COL13A1-205ENST00000398978 RPS6KA1Q15418 735 aa21.4■■□□□ 1.02
COL13A1-205ENST00000398978 TAF4BQ92750 862 aa21.4■■□□□ 1.02
COL13A1-205ENST00000398978 ZC3H12CQ9C0D7 883 aaKnown RBP21.4■■□□□ 1.02
COL13A1-205ENST00000398978 DDX47Q9H0S4 455 aaKnown RBP21.4■■□□□ 1.02
COL13A1-205ENST00000398978 DBNDD1Q9H9R9 158 aa21.4■■□□□ 1.02
COL13A1-205ENST00000398978 USP21Q9UK80 565 aa21.4■■□□□ 1.02
COL13A1-205ENST00000398978 PLIN4Q96Q06 1357 aa21.4■■□□□ 1.02
COL13A1-205ENST00000398978 DDTLA6NHG4 134 aaPredicted RBP21.4■■□□□ 1.02
COL13A1-205ENST00000398978 BBOX1O75936 387 aa21.4■■□□□ 1.02
COL13A1-205ENST00000398978 PON1P27169 355 aa21.4■■□□□ 1.02
COL13A1-205ENST00000398978 EXOC3L4Q17RC7 722 aa21.4■■□□□ 1.02
COL13A1-205ENST00000398978 GPATCH4Q5T3I0 446 aaKnown RBP21.4■■□□□ 1.02
COL13A1-205ENST00000398978 SPICE1Q8N0Z3 855 aa21.4■■□□□ 1.02
COL13A1-205ENST00000398978 RUSC1Q9BVN2 902 aa21.4■■□□□ 1.02
COL13A1-205ENST00000398978 AIPL1Q9NZN9 384 aa21.4■■□□□ 1.02
COL13A1-205ENST00000398978 CHMP2AO43633 222 aa21.39■■□□□ 1.01
COL13A1-205ENST00000398978 GCNT3O95395 438 aa21.39■■□□□ 1.01
COL13A1-205ENST00000398978 SPATA31C1P0DKV0 1188 aa21.39■■□□□ 1.01
COL13A1-205ENST00000398978 ITGA4P13612 1032 aa21.39■■□□□ 1.01
COL13A1-205ENST00000398978 ERVK-9P63128 1117 aa21.39■■□□□ 1.01
COL13A1-205ENST00000398978 NAA35Q5VZE5 725 aa21.39■■□□□ 1.01
COL13A1-205ENST00000398978 ADAT2Q7Z6V5 191 aaKnown RBP21.39■■□□□ 1.01
COL13A1-205ENST00000398978 USP38Q8NB14 1042 aa21.39■■□□□ 1.01
COL13A1-205ENST00000398978 ZNF219Q9P2Y4 722 aaPredicted RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms