RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 USP17L24Q0WX57 530 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 GPS2Q13227 327 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 KARSQ15046 597 aaKnown RBP6.46□□□□□ -1.38
PTPRD-206ENST00000397617 ZPBP2Q6X784 338 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 OTUD6AQ7L8S5 288 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 OTOP1Q7RTM1 612 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 LDHDQ86WU2 507 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 CHAMP1Q96JM3 812 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 MROH8Q9H579 483 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 KCNQ4P56696 695 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 FASTKD5Q7L8L6 764 aaKnown RBP6.46□□□□□ -1.38
PTPRD-206ENST00000397617 IFNLR1Q8IU57 520 aaPredicted RBP6.46□□□□□ -1.38
PTPRD-206ENST00000397617 KCNF1Q9H3M0 494 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 SPON1Q9HCB6 807 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 PICK1Q9NRD5 415 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 RGS17Q9UGC6 210 aaPredicted RBP6.46□□□□□ -1.38
PTPRD-206ENST00000397617 GYPCP04921 128 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 EDNRBP24530 442 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 RFC5P40937 340 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 PRCPP42785 496 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 LRCH2Q5VUJ6 765 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 GPKOWQ92917 476 aaPredicted RBP eCLIP6.46□□□□□ -1.383e-12■■■■■ 70.5
PTPRD-206ENST00000397617 ALS2CR12Q96Q35 445 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 DUSP9Q99956 384 aaKnown RBP6.46□□□□□ -1.38
PTPRD-206ENST00000397617 ACAD9Q9H845 621 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 SRRM3A6NNA2 597 aaPredicted RBP6.46□□□□□ -1.38
PTPRD-206ENST00000397617 XKR3Q5GH77 459 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 HERC4Q5GLZ8 1057 aaPredicted RBP6.46□□□□□ -1.38
PTPRD-206ENST00000397617 PAPD7Q5XG87 772 aaKnown RBP6.46□□□□□ -1.38
PTPRD-206ENST00000397617 SLFN12LQ6IEE8 588 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 ZNF467Q7Z7K2 595 aaPredicted RBP6.46□□□□□ -1.38
PTPRD-206ENST00000397617 GOLGA6L1Q8N7Z2 621 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 NAP1L3Q99457 506 aaPredicted RBP6.46□□□□□ -1.38
PTPRD-206ENST00000397617 NCAPGQ9BPX3 1015 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 PPP2R2CQ9Y2T4 447 aa6.46□□□□□ -1.38
PTPRD-206ENST00000397617 MIF4GDA9UHW6 222 aaKnown RBP6.45□□□□□ -1.38
PTPRD-206ENST00000397617 VAV2P52735 878 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 GRM1Q13255 1194 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 C1orf186Q6ZWK4 172 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 NT5DC4Q86YG4 428 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 HOMER1Q86YM7 354 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 RAB21Q9UL25 225 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 PCDHA10Q9Y5I2 948 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 CCDC188H7C350 402 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 AP5Z1O43299 807 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 STRNO43815 780 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 NDUFA10O95299 355 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 DPEP1P16444 411 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 FERP16591 822 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 ATP2B1P20020 1258 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 MTIF2P46199 727 aaKnown RBP6.45□□□□□ -1.38
PTPRD-206ENST00000397617 SPA17Q15506 151 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 CCDC144BQ3MJ40 725 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 PNMA8AQ86V59 439 aaPredicted RBP6.45□□□□□ -1.38
PTPRD-206ENST00000397617 TDRD3Q9H7E2 651 aaKnown RBP6.45□□□□□ -1.38
PTPRD-206ENST00000397617 EMILIN3Q9NT22 766 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 TTC7AQ9ULT0 858 aaPredicted RBP6.45□□□□□ -1.38
PTPRD-206ENST00000397617 PCDHGC5Q9Y5F6 944 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 PCDHA2Q9Y5H9 948 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 SPDYE5A6NIY4 337 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 TADA3O75528 432 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 FAM163BP0C2L3 166 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 GCLCP48506 637 aaPredicted RBP6.45□□□□□ -1.38
PTPRD-206ENST00000397617 EFNA5P52803 228 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 LMNB2Q03252 620 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 TRIM11Q96F44 468 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 PDCD2LQ9BRP1 358 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 KCTD10Q9H3F6 313 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 ZNF214Q9UL59 606 aaPredicted RBP6.45□□□□□ -1.38
PTPRD-206ENST00000397617 CCNA1P78396 465 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 GABPB1Q06547 395 aaPredicted RBP6.45□□□□□ -1.38
PTPRD-206ENST00000397617 LRRC47Q8N1G4 583 aaKnown RBP6.45□□□□□ -1.38
PTPRD-206ENST00000397617 NKX2-3Q8TAU0 364 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 ADARB2Q9NS39 739 aaKnown RBP6.45□□□□□ -1.38
PTPRD-206ENST00000397617 CTAGE9A4FU28 777 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 OPLAHO14841 1288 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 TACC1O75410 805 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 FMR1Q06787 632 aaKnown RBP eCLIP6.45□□□□□ -1.38
PTPRD-206ENST00000397617 USP50Q70EL3 339 aaPredicted RBP6.45□□□□□ -1.38
PTPRD-206ENST00000397617 APBB1IPQ7Z5R6 666 aaPredicted RBP6.45□□□□□ -1.38
PTPRD-206ENST00000397617 ZNF677Q86XU0 584 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 VCPIP1Q96JH7 1222 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 SIK3Q9Y2K2 1263 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 A0A1W2PRG0 241 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 MYMKA6NI61 221 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 GTF2BQ00403 316 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 GCNT1Q02742 428 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 INCENPQ9NQS7 918 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 STYXL1Q9Y6J8 313 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 A0A0G2JMZ2 1700 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 MSH4O15457 936 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 ASAP2O43150 1006 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 LDHAP00338 332 aaKnown RBP6.45□□□□□ -1.38
PTPRD-206ENST00000397617 PICALMQ13492 652 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 GBP6Q6ZN66 633 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 MSANTD4Q8NCY6 345 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 NEK11Q8NG66 645 aa6.45□□□□□ -1.38
PTPRD-206ENST00000397617 CNOT6LQ96LI5 555 aaKnown RBP6.45□□□□□ -1.38
PTPRD-206ENST00000397617 FEZ2Q9UHY8 353 aaPredicted RBP6.45□□□□□ -1.38
PTPRD-206ENST00000397617 A0A087X0B3 334 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms