RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 RPA1P27694 616 aa18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 CNGA1P29973 690 aa18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 CCT6AP40227 531 aaKnown RBP18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 KRT76Q01546 638 aa18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 EPHA7Q15375 998 aa18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 CAMK4Q16566 473 aa18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 ZSCAN23Q3MJ62 389 aa18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 RRAGBQ5VZM2 374 aa18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 HAUS3Q68CZ6 603 aa18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 TAPT1Q6NXT6 567 aa18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 CCDC62Q6P9F0 684 aa18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 RBM43Q6ZSC3 357 aaKnown RBP18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 ELOA2Q8IYF1 753 aaPredicted RBP18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 CNNM3Q8NE01 707 aa18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 RASSF8Q8NHQ8 419 aa18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 PLIN2Q99541 437 aa18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 EIF2AK1Q9BQI3 630 aaKnown RBP18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 POLR3CQ9BUI4 534 aaPredicted RBP18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 GZF1Q9H116 711 aaPredicted RBP18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 TNMDQ9H2S6 317 aa18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 ZMYND8Q9ULU4 1186 aaPredicted RBP18.99■□□□□ 0.63
TSPAN4-205ENST00000397406 KDM3AQ9Y4C1 1321 aa18.98■□□□□ 0.63
TSPAN4-205ENST00000397406 FRMPD3Q5JV73 1810 aa18.98■□□□□ 0.63
TSPAN4-205ENST00000397406 RBM47A0AV96 593 aaKnown RBP18.98■□□□□ 0.63
TSPAN4-205ENST00000397406 STAT6P42226 847 aa18.98■□□□□ 0.63
TSPAN4-205ENST00000397406 ZRSR1Q15695 479 aaKnown RBP18.98■□□□□ 0.63
TSPAN4-205ENST00000397406 ZNF746Q6NUN9 644 aaPredicted RBP18.98■□□□□ 0.63
TSPAN4-205ENST00000397406 MIER3Q7Z3K6 550 aa18.98■□□□□ 0.63
TSPAN4-205ENST00000397406 CATSPER3Q86XQ3 398 aa18.98■□□□□ 0.63
TSPAN4-205ENST00000397406 HSD17B14Q9BPX1 270 aa18.98■□□□□ 0.63
TSPAN4-205ENST00000397406 PDGFCQ9NRA1 345 aa18.98■□□□□ 0.63
TSPAN4-205ENST00000397406 DDX41Q9UJV9 622 aaKnown RBP18.98■□□□□ 0.63
TSPAN4-205ENST00000397406 MYH9P35579 1960 aaKnown RBP18.97■□□□□ 0.63
TSPAN4-205ENST00000397406 POTEB3A0JP26 581 aa18.97■□□□□ 0.63
TSPAN4-205ENST00000397406 CTAGE5O15320 804 aa18.97■□□□□ 0.63
TSPAN4-205ENST00000397406 SYN1P17600 705 aa18.97■□□□□ 0.63
TSPAN4-205ENST00000397406 MDM2Q00987 491 aaPredicted RBP18.97■□□□□ 0.63
TSPAN4-205ENST00000397406 LY6KQ17RY6 165 aa18.97■□□□□ 0.63
TSPAN4-205ENST00000397406 POTEBQ6S5H4 581 aa18.97■□□□□ 0.63
TSPAN4-205ENST00000397406 SH3RF1Q7Z6J0 888 aa18.97■□□□□ 0.63
TSPAN4-205ENST00000397406 CEP57L1Q8IYX8 460 aa18.97■□□□□ 0.63
TSPAN4-205ENST00000397406 GIMAP8Q8ND71 665 aaPredicted RBP18.97■□□□□ 0.63
TSPAN4-205ENST00000397406 RDM1Q8NG50 284 aa18.97■□□□□ 0.63
TSPAN4-205ENST00000397406 SCFD2Q8WU76 684 aa18.97■□□□□ 0.63
TSPAN4-205ENST00000397406 CDK5RAP3Q96JB5 506 aa18.97■□□□□ 0.63
TSPAN4-205ENST00000397406 NT5C3AQ9H0P0 336 aa18.97■□□□□ 0.63
TSPAN4-205ENST00000397406 ABHD16BQ9H3Z7 469 aa18.97■□□□□ 0.63
TSPAN4-205ENST00000397406 CUEDC2Q9H467 287 aa18.97■□□□□ 0.63
TSPAN4-205ENST00000397406 JPH1Q9HDC5 661 aaPredicted RBP18.97■□□□□ 0.63
TSPAN4-205ENST00000397406 TUFT1Q9NNX1 390 aa18.97■□□□□ 0.63
TSPAN4-205ENST00000397406 BLOC1S4Q9NUP1 217 aa18.97■□□□□ 0.63
TSPAN4-205ENST00000397406 SLC9A2Q9UBY0 812 aa18.97■□□□□ 0.63
TSPAN4-205ENST00000397406 TRIOBPQ9H2D6 2365 aa18.96■□□□□ 0.63
TSPAN4-205ENST00000397406 LAMA3Q16787 3333 aa18.96■□□□□ 0.63
TSPAN4-205ENST00000397406 WDR64B1ANS9 1081 aa18.96■□□□□ 0.63
TSPAN4-205ENST00000397406 SEPT4O43236 478 aa18.96■□□□□ 0.63
TSPAN4-205ENST00000397406 SLITRK3O94933 977 aa18.96■□□□□ 0.63
TSPAN4-205ENST00000397406 ZNF865P0CJ78 1059 aaPredicted RBP18.96■□□□□ 0.63
TSPAN4-205ENST00000397406 SFNP31947 248 aa18.96■□□□□ 0.63
TSPAN4-205ENST00000397406 JAK3P52333 1124 aa18.96■□□□□ 0.63
TSPAN4-205ENST00000397406 NEDD9Q14511 834 aa18.96■□□□□ 0.63
TSPAN4-205ENST00000397406 GJC2Q5T442 439 aaPredicted RBP18.96■□□□□ 0.63
TSPAN4-205ENST00000397406 KANK3Q6NY19 840 aa18.96■□□□□ 0.63
TSPAN4-205ENST00000397406 CYFIP1Q7L576 1253 aa18.96■□□□□ 0.63
TSPAN4-205ENST00000397406 KCNK18Q7Z418 384 aa18.96■□□□□ 0.63
TSPAN4-205ENST00000397406 NEK9Q8TD19 979 aa18.96■□□□□ 0.63
TSPAN4-205ENST00000397406 DYDC2Q96IM9 177 aa18.96■□□□□ 0.63
TSPAN4-205ENST00000397406 MTRQ99707 1265 aa18.96■□□□□ 0.63
TSPAN4-205ENST00000397406 GDF15Q99988 308 aa18.96■□□□□ 0.63
TSPAN4-205ENST00000397406 RGL1Q9NZL6 768 aa18.96■□□□□ 0.63
TSPAN4-205ENST00000397406 STK17AQ9UEE5 414 aa18.96■□□□□ 0.63
TSPAN4-205ENST00000397406 TCEAL9Q9UHQ7 104 aa18.96■□□□□ 0.63
TSPAN4-205ENST00000397406 TELO2Q9Y4R8 837 aa18.96■□□□□ 0.63
TSPAN4-205ENST00000397406 DNAH12Q6ZR08 3092 aa18.96■□□□□ 0.63
TSPAN4-205ENST00000397406 LETM1O95202 739 aaPredicted RBP18.95■□□□□ 0.62
TSPAN4-205ENST00000397406 GGPS1O95749 300 aa18.95■□□□□ 0.62
TSPAN4-205ENST00000397406 MUTP22033 750 aa18.95■□□□□ 0.62
TSPAN4-205ENST00000397406 CYP4A11Q02928 519 aa18.95■□□□□ 0.62
TSPAN4-205ENST00000397406 ACVR2BQ13705 512 aa18.95■□□□□ 0.62
TSPAN4-205ENST00000397406 TTLL4Q14679 1199 aa18.95■□□□□ 0.62
TSPAN4-205ENST00000397406 POTEGQ6S5H5 508 aa18.95■□□□□ 0.62
TSPAN4-205ENST00000397406 SMAP1Q8IYB5 467 aaPredicted RBP18.95■□□□□ 0.62
TSPAN4-205ENST00000397406 GRAMD1CQ8IYS0 662 aa18.95■□□□□ 0.62
TSPAN4-205ENST00000397406 LENG1Q96BZ8 264 aaPredicted RBP18.95■□□□□ 0.62
TSPAN4-205ENST00000397406 PAGE5Q96GU1 130 aa18.95■□□□□ 0.62
TSPAN4-205ENST00000397406 KIAA1024Q9UPX6 916 aa18.95■□□□□ 0.62
TSPAN4-205ENST00000397406 SYCE3A1L190 88 aa18.94■□□□□ 0.62
TSPAN4-205ENST00000397406 SORBS3O60504 671 aa18.94■□□□□ 0.62
TSPAN4-205ENST00000397406 MSCO60682 206 aa18.94■□□□□ 0.62
TSPAN4-205ENST00000397406 P4HBP07237 508 aaKnown RBP18.94■□□□□ 0.62
TSPAN4-205ENST00000397406 PRR29P0C7W0 189 aa18.94■□□□□ 0.62
TSPAN4-205ENST00000397406 TXNP10599 105 aaKnown RBP18.94■□□□□ 0.62
TSPAN4-205ENST00000397406 ACTR2P61160 394 aa18.94■□□□□ 0.62
TSPAN4-205ENST00000397406 CTTNQ14247 550 aaKnown RBP18.94■□□□□ 0.62
TSPAN4-205ENST00000397406 CELF3Q5SZQ8 465 aaKnown RBP18.94■□□□□ 0.62
TSPAN4-205ENST00000397406 TMEM63BQ5T3F8 832 aa18.94■□□□□ 0.62
TSPAN4-205ENST00000397406 METTL7BQ6UX53 244 aa18.94■□□□□ 0.62
TSPAN4-205ENST00000397406 CKAP2LQ8IYA6 745 aa18.94■□□□□ 0.62
TSPAN4-205ENST00000397406 RAD54LQ92698 747 aa18.94■□□□□ 0.62
TSPAN4-205ENST00000397406 ANP32EQ9BTT0 268 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms