RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 AZI2Q9H6S1 392 aa26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 ZNF302Q9NR11 478 aa26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 GABBR1Q9UBS5 961 aa26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 IGKV6D-21A0A0A0MT36 114 aa26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 ZEB2O60315 1214 aa26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 PRPF40AO75400 957 aaKnown RBP26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 LGR5O75473 907 aa26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 LGALS2P05162 132 aa26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 P4HBP07237 508 aaKnown RBP26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 CTTNQ14247 550 aaKnown RBP26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 LRRC41Q15345 812 aa26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 FAM160B1Q5W0V3 765 aa26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 PCYT2Q99447 389 aa26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 MMTAG2Q9BU76 263 aaKnown RBP26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 POLR3CQ9BUI4 534 aaPredicted RBP26.48■■□□□ 1.83
TSPAN4-203ENST00000397397 GOLGA6L22H0YM25 854 aa26.47■■□□□ 1.83
TSPAN4-203ENST00000397397 MED24O75448 989 aa26.47■■□□□ 1.83
TSPAN4-203ENST00000397397 CST5P28325 142 aaPredicted RBP26.47■■□□□ 1.83
TSPAN4-203ENST00000397397 MYH9P35579 1960 aaKnown RBP26.47■■□□□ 1.83
TSPAN4-203ENST00000397397 TXLNAP40222 546 aa26.47■■□□□ 1.83
TSPAN4-203ENST00000397397 ZRSR1Q15695 479 aaKnown RBP26.47■■□□□ 1.83
TSPAN4-203ENST00000397397 RESP18Q5W5W9 173 aa26.47■■□□□ 1.83
TSPAN4-203ENST00000397397 ARRDC4Q8NCT1 418 aa26.47■■□□□ 1.83
TSPAN4-203ENST00000397397 GLG1Q92896 1179 aa26.47■■□□□ 1.83
TSPAN4-203ENST00000397397 HSD17B14Q9BPX1 270 aa26.47■■□□□ 1.83
TSPAN4-203ENST00000397397 CCSER1Q9C0I3 900 aa26.47■■□□□ 1.83
TSPAN4-203ENST00000397397 TUFT1Q9NNX1 390 aa26.47■■□□□ 1.83
TSPAN4-203ENST00000397397 EMSYQ7Z589 1322 aa26.46■■□□□ 1.83
TSPAN4-203ENST00000397397 A0A1W2PQ27 194 aa26.46■■□□□ 1.83
TSPAN4-203ENST00000397397 A0A1W2PQ64 194 aa26.46■■□□□ 1.83
TSPAN4-203ENST00000397397 A0A1W2PQD8 194 aa26.46■■□□□ 1.83
TSPAN4-203ENST00000397397 KPNA6O60684 536 aa26.46■■□□□ 1.83
TSPAN4-203ENST00000397397 SLITRK3O94933 977 aa26.46■■□□□ 1.83
TSPAN4-203ENST00000397397 GJB1P08034 283 aa26.46■■□□□ 1.83
TSPAN4-203ENST00000397397 ZNF286BP0CG31 522 aa26.46■■□□□ 1.83
TSPAN4-203ENST00000397397 RPA1P27694 616 aa26.46■■□□□ 1.83
TSPAN4-203ENST00000397397 QARSP47897 775 aaKnown RBP26.46■■□□□ 1.83
TSPAN4-203ENST00000397397 STAT5BP51692 787 aa26.46■■□□□ 1.83
TSPAN4-203ENST00000397397 MLLT1Q03111 559 aaPredicted RBP26.46■■□□□ 1.83
TSPAN4-203ENST00000397397 UGCGQ16739 394 aa26.46■■□□□ 1.83
TSPAN4-203ENST00000397397 CATSPER3Q86XQ3 398 aa26.46■■□□□ 1.83
TSPAN4-203ENST00000397397 TRIM50Q86XT4 487 aa26.46■■□□□ 1.83
TSPAN4-203ENST00000397397 TPH2Q8IWU9 490 aa26.46■■□□□ 1.83
TSPAN4-203ENST00000397397 ATP6V0A1Q93050 837 aa26.46■■□□□ 1.83
TSPAN4-203ENST00000397397 LXNQ9BS40 222 aa26.46■■□□□ 1.83
TSPAN4-203ENST00000397397 SMARCAD1Q9H4L7 1026 aa26.46■■□□□ 1.83
TSPAN4-203ENST00000397397 FAM13BQ9NYF5 915 aa26.46■■□□□ 1.83
TSPAN4-203ENST00000397397 GADD45BO75293 160 aaPredicted RBP26.45■■□□□ 1.82
TSPAN4-203ENST00000397397 SPATA31C1P0DKV0 1188 aa26.45■■□□□ 1.82
TSPAN4-203ENST00000397397 CMA1P23946 247 aa26.45■■□□□ 1.82
TSPAN4-203ENST00000397397 PSMC5P62195 406 aa26.45■■□□□ 1.82
TSPAN4-203ENST00000397397 KCNA10Q16322 511 aa26.45■■□□□ 1.82
TSPAN4-203ENST00000397397 PDXDC2PQ6P474 469 aa26.45■■□□□ 1.82
TSPAN4-203ENST00000397397 PCSK9Q8NBP7 692 aaKnown RBP26.45■■□□□ 1.82
TSPAN4-203ENST00000397397 RASSF8Q8NHQ8 419 aa26.45■■□□□ 1.82
TSPAN4-203ENST00000397397 AFAP1L1Q8TED9 768 aa26.45■■□□□ 1.82
TSPAN4-203ENST00000397397 CALML4Q96GE6 196 aa26.45■■□□□ 1.82
TSPAN4-203ENST00000397397 CDK5RAP3Q96JB5 506 aa26.45■■□□□ 1.82
TSPAN4-203ENST00000397397 OGDHLQ9ULD0 1010 aa26.45■■□□□ 1.82
TSPAN4-203ENST00000397397 IGSF9BQ9UPX0 1349 aa26.44■■□□□ 1.82
TSPAN4-203ENST00000397397 KDM3AQ9Y4C1 1321 aa26.44■■□□□ 1.82
TSPAN4-203ENST00000397397 POTEB3A0JP26 581 aa26.44■■□□□ 1.82
TSPAN4-203ENST00000397397 DKC1O60832 514 aaKnown RBP eCLIP26.44■■□□□ 1.82
TSPAN4-203ENST00000397397 SGPL1O95470 568 aa26.44■■□□□ 1.82
TSPAN4-203ENST00000397397 TFRCP02786 760 aaKnown RBP26.44■■□□□ 1.82
TSPAN4-203ENST00000397397 EN2P19622 333 aaPredicted RBP26.44■■□□□ 1.82
TSPAN4-203ENST00000397397 POTEBQ6S5H4 581 aa26.44■■□□□ 1.82
TSPAN4-203ENST00000397397 PLPPR4Q7Z2D5 763 aa26.44■■□□□ 1.82
TSPAN4-203ENST00000397397 FSIP1Q8NA03 581 aa26.44■■□□□ 1.82
TSPAN4-203ENST00000397397 U2AF1L4Q8WU68 220 aaKnown RBP26.44■■□□□ 1.82
TSPAN4-203ENST00000397397 C16orf70Q9BSU1 422 aa26.44■■□□□ 1.82
TSPAN4-203ENST00000397397 TMEM106CQ9BVX2 250 aa26.44■■□□□ 1.82
TSPAN4-203ENST00000397397 ZSWIM4Q9H7M6 989 aa26.44■■□□□ 1.82
TSPAN4-203ENST00000397397 CCDC39Q9UFE4 941 aa26.44■■□□□ 1.82
TSPAN4-203ENST00000397397 MAFBQ9Y5Q3 323 aaPredicted RBP26.44■■□□□ 1.82
TSPAN4-203ENST00000397397 SLC26A4O43511 780 aa26.43■■□□□ 1.82
TSPAN4-203ENST00000397397 PURAQ00577 322 aaKnown RBP26.43■■□□□ 1.82
TSPAN4-203ENST00000397397 KARSQ15046 597 aaKnown RBP26.43■■□□□ 1.82
TSPAN4-203ENST00000397397 ECM1Q16610 540 aa26.43■■□□□ 1.82
TSPAN4-203ENST00000397397 CCSAPQ6IQ19 270 aaPredicted RBP26.43■■□□□ 1.82
TSPAN4-203ENST00000397397 MRPS27Q92552 414 aaKnown RBP26.43■■□□□ 1.82
TSPAN4-203ENST00000397397 PLIN2Q99541 437 aa26.43■■□□□ 1.82
TSPAN4-203ENST00000397397 WRAP73Q9P2S5 460 aaPredicted RBP26.43■■□□□ 1.82
TSPAN4-203ENST00000397397 ZNF215Q9UL58 517 aaPredicted RBP26.43■■□□□ 1.82
TSPAN4-203ENST00000397397 BRCA2P51587 3418 aa26.43■■□□□ 1.82
TSPAN4-203ENST00000397397 A0A1B0GVL5 298 aa26.42■■□□□ 1.82
TSPAN4-203ENST00000397397 KBTBD13C9JR72 458 aa26.42■■□□□ 1.82
TSPAN4-203ENST00000397397 ASGR1P07306 291 aa26.42■■□□□ 1.82
TSPAN4-203ENST00000397397 MARK3P27448 753 aa26.42■■□□□ 1.82
TSPAN4-203ENST00000397397 GRB10Q13322 594 aa26.42■■□□□ 1.82
TSPAN4-203ENST00000397397 HYIQ5T013 277 aa26.42■■□□□ 1.82
TSPAN4-203ENST00000397397 POTEGQ6S5H5 508 aa26.42■■□□□ 1.82
TSPAN4-203ENST00000397397 CKAP2LQ8IYA6 745 aa26.42■■□□□ 1.82
TSPAN4-203ENST00000397397 PNMA5Q96PV4 448 aa26.42■■□□□ 1.82
TSPAN4-203ENST00000397397 TSEN34Q9BSV6 310 aaKnown RBP26.42■■□□□ 1.82
TSPAN4-203ENST00000397397 MTG1Q9BT17 334 aaPredicted RBP26.42■■□□□ 1.82
TSPAN4-203ENST00000397397 PANK2Q9BZ23 570 aa26.42■■□□□ 1.82
TSPAN4-203ENST00000397397 CRISPLD2Q9H0B8 497 aa26.42■■□□□ 1.82
TSPAN4-203ENST00000397397 ERAP1Q9NZ08 941 aa26.42■■□□□ 1.82
TSPAN4-203ENST00000397397 KIAA1024Q9UPX6 916 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms