RNA–Protein interactions for RNA: ENST00000396655.6

NDUFA9-202, Transcript of NADH:ubiquinone oxidoreductase subunit A9, humanhuman

TSL 1 (best)

Gene NDUFA9, Length 1,037 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA9-202ENST00000396655 ZNF746Q6NUN9 644 aaPredicted RBP12.6□□□□□ -0.39
NDUFA9-202ENST00000396655 TAF2Q6P1X5 1199 aa12.6□□□□□ -0.39
NDUFA9-202ENST00000396655 ABHD15Q6UXT9 468 aa12.6□□□□□ -0.39
NDUFA9-202ENST00000396655 OTOP2Q7RTS6 562 aa12.6□□□□□ -0.39
NDUFA9-202ENST00000396655 SMAP1Q8IYB5 467 aaPredicted RBP12.6□□□□□ -0.39
NDUFA9-202ENST00000396655 BLIDQ8IZY5 108 aa12.6□□□□□ -0.39
NDUFA9-202ENST00000396655 TET1Q8NFU7 2136 aa12.6□□□□□ -0.39
NDUFA9-202ENST00000396655 PPP1R13LQ8WUF5 828 aa12.6□□□□□ -0.39
NDUFA9-202ENST00000396655 GLG1Q92896 1179 aa12.6□□□□□ -0.39
NDUFA9-202ENST00000396655 LARP6Q9BRS8 491 aaKnown RBP12.6□□□□□ -0.39
NDUFA9-202ENST00000396655 SEMA6BQ9H3T3 888 aa12.6□□□□□ -0.39
NDUFA9-202ENST00000396655 SETD4Q9NVD3 440 aa12.6□□□□□ -0.39
NDUFA9-202ENST00000396655 ABHD14A-ACY1A0A1B0GW23 586 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 MBLAC1A4D2B0 266 aaPredicted RBP12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 RSPH10B2B2RC85 870 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 ADAMTS3O15072 1205 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 TREHO43280 583 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 RSPH10BP0C881 870 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 DNAJB2P25686 324 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 STAT5BP51692 787 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 ZNF200P98182 395 aaPredicted RBP12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 KRT76Q01546 638 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 GPNMBQ14956 572 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 NPY5RQ15761 445 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 ME3Q16798 604 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 C8orf34Q49A92 452 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 ZNF618Q5T7W0 954 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 CNKSR3Q6P9H4 555 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 TRAF7Q6Q0C0 670 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 DEFB128Q7Z7B8 93 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 TRIM50Q86XT4 487 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 LMBR1Q8WVP7 490 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 GTF3C6Q969F1 213 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 PCYT2Q99447 389 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 RIT2Q99578 217 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 ZNF577Q9BSK1 485 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 PHF20Q9BVI0 1012 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 FTOQ9C0B1 505 aaKnown RBP eCLIP12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 CXXC1Q9P0U4 656 aaPredicted RBP12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 MSRAQ9UJ68 235 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 TELO2Q9Y4R8 837 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 SCN5AQ14524 2016 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 MYO9BQ13459 2157 aa12.59□□□□□ -0.39
NDUFA9-202ENST00000396655 PPFIA3O75145 1194 aa12.58□□□□□ -0.4
NDUFA9-202ENST00000396655 CTDNEP1O95476 244 aa12.58□□□□□ -0.4
NDUFA9-202ENST00000396655 THPOP40225 353 aa12.58□□□□□ -0.4
NDUFA9-202ENST00000396655 RBM25P49756 843 aaKnown RBP12.58□□□□□ -0.4
NDUFA9-202ENST00000396655 PPFIA1Q13136 1202 aa12.58□□□□□ -0.4
NDUFA9-202ENST00000396655 Q4G0T1 1027 aa12.58□□□□□ -0.4
NDUFA9-202ENST00000396655 PRR16Q569H4 304 aa12.58□□□□□ -0.4
NDUFA9-202ENST00000396655 FAM26DQ5JW98 314 aa12.58□□□□□ -0.4
NDUFA9-202ENST00000396655 FAM160B1Q5W0V3 765 aa12.58□□□□□ -0.4
NDUFA9-202ENST00000396655 MIS18BP1Q6P0N0 1132 aa12.58□□□□□ -0.4
NDUFA9-202ENST00000396655 KRT25Q7Z3Z0 450 aa12.58□□□□□ -0.4
NDUFA9-202ENST00000396655 RSPH3Q86UC2 560 aa12.58□□□□□ -0.4
NDUFA9-202ENST00000396655 RASGRP4Q8TDF6 673 aa12.58□□□□□ -0.4
NDUFA9-202ENST00000396655 TBCKQ8TEA7 893 aa12.58□□□□□ -0.4
NDUFA9-202ENST00000396655 LENG9Q96B70 501 aa12.58□□□□□ -0.4
NDUFA9-202ENST00000396655 TIFAQ96CG3 184 aa12.58□□□□□ -0.4
NDUFA9-202ENST00000396655 MBOAT7Q96N66 472 aa12.58□□□□□ -0.4
NDUFA9-202ENST00000396655 SLC9A7Q96T83 725 aa12.58□□□□□ -0.4
NDUFA9-202ENST00000396655 PKD2L1Q9P0L9 805 aa12.58□□□□□ -0.4
NDUFA9-202ENST00000396655 TCEAL9Q9UHQ7 104 aa12.58□□□□□ -0.4
NDUFA9-202ENST00000396655 LIMCH1Q9UPQ0 1083 aa12.58□□□□□ -0.4
NDUFA9-202ENST00000396655 PCDHA11Q9Y5I1 949 aa12.58□□□□□ -0.4
NDUFA9-202ENST00000396655 CHD7Q9P2D1 2997 aa12.57□□□□□ -0.4
NDUFA9-202ENST00000396655 EDIL3O43854 480 aa12.57□□□□□ -0.4
NDUFA9-202ENST00000396655 NBNO60934 754 aa12.57□□□□□ -0.4
NDUFA9-202ENST00000396655 CCNE2O96020 404 aa12.57□□□□□ -0.4
NDUFA9-202ENST00000396655 ATP2A2P16615 1042 aaKnown RBP12.57□□□□□ -0.4
NDUFA9-202ENST00000396655 IKBKEQ14164 716 aa12.57□□□□□ -0.4
NDUFA9-202ENST00000396655 NONOQ15233 471 aaKnown RBP eCLIP12.57□□□□□ -0.4
NDUFA9-202ENST00000396655 GRIK4Q16099 956 aa12.57□□□□□ -0.4
NDUFA9-202ENST00000396655 MARCH8Q5T0T0 291 aa12.57□□□□□ -0.4
NDUFA9-202ENST00000396655 PPP4R3AQ6IN85 833 aa12.57□□□□□ -0.4
NDUFA9-202ENST00000396655 WNT8BQ93098 351 aa12.57□□□□□ -0.4
NDUFA9-202ENST00000396655 ZSCAN31Q96LW9 406 aaPredicted RBP12.57□□□□□ -0.4
NDUFA9-202ENST00000396655 NAP1L4Q99733 375 aaKnown RBP12.57□□□□□ -0.4
NDUFA9-202ENST00000396655 LLPHQ9BRT6 129 aaKnown RBP12.57□□□□□ -0.4
NDUFA9-202ENST00000396655 PBX4Q9BYU1 374 aa12.57□□□□□ -0.4
NDUFA9-202ENST00000396655 TTYH1Q9H313 450 aaPredicted RBP12.57□□□□□ -0.4
NDUFA9-202ENST00000396655 PRDM6Q9NQX0 595 aa12.57□□□□□ -0.4
NDUFA9-202ENST00000396655 ORC3Q9UBD5 711 aaPredicted RBP12.57□□□□□ -0.4
NDUFA9-202ENST00000396655 TUBE1Q9UJT0 475 aa12.57□□□□□ -0.4
NDUFA9-202ENST00000396655 PCDHA10Q9Y5I2 948 aa12.57□□□□□ -0.4
NDUFA9-202ENST00000396655 MAFBQ9Y5Q3 323 aaPredicted RBP12.57□□□□□ -0.4
NDUFA9-202ENST00000396655 SQORQ9Y6N5 450 aa12.57□□□□□ -0.4
NDUFA9-202ENST00000396655 TRANK1O15050 2925 aa12.56□□□□□ -0.4
NDUFA9-202ENST00000396655 NCOR1O75376 2440 aa12.56□□□□□ -0.4
NDUFA9-202ENST00000396655 POTEB3A0JP26 581 aa12.56□□□□□ -0.4
NDUFA9-202ENST00000396655 ZBBXA8MT70 800 aa12.56□□□□□ -0.4
NDUFA9-202ENST00000396655 HBP1O60381 514 aa12.56□□□□□ -0.4
NDUFA9-202ENST00000396655 FDPSP14324 419 aaKnown RBP12.56□□□□□ -0.4
NDUFA9-202ENST00000396655 INSRRP14616 1297 aa12.56□□□□□ -0.4
NDUFA9-202ENST00000396655 GCFC2P16383 781 aaKnown RBP12.56□□□□□ -0.4
NDUFA9-202ENST00000396655 SFNP31947 248 aa12.56□□□□□ -0.4
NDUFA9-202ENST00000396655 MBTPS1Q14703 1052 aa12.56□□□□□ -0.4
NDUFA9-202ENST00000396655 PLCB4Q15147 1175 aa12.56□□□□□ -0.4
NDUFA9-202ENST00000396655 PLEKHG4Q58EX7 1191 aa12.56□□□□□ -0.4
NDUFA9-202ENST00000396655 POTEBQ6S5H4 581 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms