RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 CYP3A4P08684 503 aa10.12□□□□□ -0.79
ATG4A-205ENST00000394892 BMP1P13497 986 aa10.12□□□□□ -0.79
ATG4A-205ENST00000394892 IFNAR1P17181 557 aa10.12□□□□□ -0.79
ATG4A-205ENST00000394892 ATP4AP20648 1035 aa10.12□□□□□ -0.79
ATG4A-205ENST00000394892 ACTR2P61160 394 aa10.12□□□□□ -0.79
ATG4A-205ENST00000394892 MGAT3Q09327 533 aa10.12□□□□□ -0.79
ATG4A-205ENST00000394892 PLCB4Q15147 1175 aa10.12□□□□□ -0.79
ATG4A-205ENST00000394892 CCDC155Q8N6L0 562 aa10.12□□□□□ -0.79
ATG4A-205ENST00000394892 ZNF713Q8N859 430 aaPredicted RBP10.12□□□□□ -0.79
ATG4A-205ENST00000394892 TRAPPC12Q8WVT3 735 aa10.12□□□□□ -0.79
ATG4A-205ENST00000394892 AIFM3Q96NN9 605 aa10.12□□□□□ -0.79
ATG4A-205ENST00000394892 PPP4R2Q9NY27 417 aa10.12□□□□□ -0.79
ATG4A-205ENST00000394892 VPS54Q9P1Q0 977 aa10.12□□□□□ -0.79
ATG4A-205ENST00000394892 HCN4Q9Y3Q4 1203 aa10.12□□□□□ -0.79
ATG4A-205ENST00000394892 MYH6P13533 1939 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 NFASCO94856 1347 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 ABHD14A-ACY1A0A1B0GW23 586 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 ZBTB42B2RXF5 422 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 MAFGO15525 162 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 EPB41L2O43491 1005 aaKnown RBP10.11□□□□□ -0.79
ATG4A-205ENST00000394892 GJB5O95377 273 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 FOSP01100 380 aaPredicted RBP10.11□□□□□ -0.79
ATG4A-205ENST00000394892 INSRRP14616 1297 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 POU3F3P20264 500 aaPredicted RBP10.11□□□□□ -0.79
ATG4A-205ENST00000394892 KCNJ6P48051 423 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 AP3B2Q13367 1082 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 GRIK4Q16099 956 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 FAM117BQ6P1L5 589 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 ABHD15Q6UXT9 468 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 RPAINQ86UA6 219 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 TEX2Q8IWB9 1127 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 GIMAP8Q8ND71 665 aaPredicted RBP10.11□□□□□ -0.79
ATG4A-205ENST00000394892 CDHR1Q96JP9 859 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 SLC26A6Q9BXS9 759 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 TM6SF1Q9BZW5 370 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 EHMT1Q9H9B1 1298 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 JPH1Q9HDC5 661 aaPredicted RBP10.11□□□□□ -0.79
ATG4A-205ENST00000394892 SLC9A2Q9UBY0 812 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 RAPGEFL1Q9UHV5 662 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 ARIH1Q9Y4X5 557 aaPredicted RBP10.11□□□□□ -0.79
ATG4A-205ENST00000394892 MTCH2Q9Y6C9 303 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 REV3LO60673 3130 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 XIRP2A4UGR9 3374 aa10.11□□□□□ -0.79
ATG4A-205ENST00000394892 EMSYQ7Z589 1322 aa10.1□□□□□ -0.79
ATG4A-205ENST00000394892 NRCAMQ92823 1304 aa10.1□□□□□ -0.79
ATG4A-205ENST00000394892 M0R2N6 131 aa10.1□□□□□ -0.79
ATG4A-205ENST00000394892 DDX39AO00148 427 aaKnown RBP10.1□□□□□ -0.79
ATG4A-205ENST00000394892 PARNO95453 639 aaKnown RBP10.1□□□□□ -0.79
ATG4A-205ENST00000394892 SEC24BO95487 1268 aa10.1□□□□□ -0.79
ATG4A-205ENST00000394892 PSMA5P28066 241 aa10.1□□□□□ -0.79
ATG4A-205ENST00000394892 FGD1P98174 961 aa10.1□□□□□ -0.79
ATG4A-205ENST00000394892 TFF2Q03403 129 aa10.1□□□□□ -0.79
ATG4A-205ENST00000394892 PPFIA1Q13136 1202 aa10.1□□□□□ -0.79
ATG4A-205ENST00000394892 LPIN1Q14693 890 aa10.1□□□□□ -0.79
ATG4A-205ENST00000394892 NIPA1Q7RTP0 329 aa10.1□□□□□ -0.79
ATG4A-205ENST00000394892 PLA2G4DQ86XP0 818 aa10.1□□□□□ -0.79
ATG4A-205ENST00000394892 CCDC60Q8IWA6 550 aaPredicted RBP10.1□□□□□ -0.79
ATG4A-205ENST00000394892 DNAJB3Q8WWF6 145 aa10.1□□□□□ -0.79
ATG4A-205ENST00000394892 LINC01599Q8WXQ3 324 aa10.1□□□□□ -0.79
ATG4A-205ENST00000394892 ARNTL2Q8WYA1 636 aa10.1□□□□□ -0.79
ATG4A-205ENST00000394892 HLA-CQ95604 372 aa10.1□□□□□ -0.79
ATG4A-205ENST00000394892 GJA10Q969M2 543 aa10.1□□□□□ -0.79
ATG4A-205ENST00000394892 NECAB3Q96P71 396 aaPredicted RBP10.1□□□□□ -0.79
ATG4A-205ENST00000394892 RNF26Q9BY78 433 aaPredicted RBP10.1□□□□□ -0.79
ATG4A-205ENST00000394892 SMARCAD1Q9H4L7 1026 aa10.1□□□□□ -0.79
ATG4A-205ENST00000394892 AGO3Q9H9G7 860 aaKnown RBP10.1□□□□□ -0.79
ATG4A-205ENST00000394892 ZNF215Q9UL58 517 aaPredicted RBP10.1□□□□□ -0.79
ATG4A-205ENST00000394892 TANC1Q9C0D5 1861 aa10.1□□□□□ -0.79
ATG4A-205ENST00000394892 MUC3AQ02505 3323 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 CCDC196A0A1B0GTZ2 297 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 LINC01553A4QN01 128 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 TLL1O43897 1013 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 CAND2O75155 1236 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 CTDNEP1O95476 244 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 LINC00271P0C7V0 271 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 GHRP10912 638 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 CIITAP33076 1130 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 KCNQ1P51787 676 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 IGBP1P78318 339 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 HTRA4P83105 476 aaPredicted RBP10.09□□□□□ -0.79
ATG4A-205ENST00000394892 GRB10Q13322 594 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 IKBKEQ14164 716 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 TMEM31Q5JXX7 168 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 PLPPR4Q7Z2D5 763 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 RTN4RL1Q86UN2 441 aaPredicted RBP10.09□□□□□ -0.79
ATG4A-205ENST00000394892 SP7Q8TDD2 431 aaPredicted RBP10.09□□□□□ -0.79
ATG4A-205ENST00000394892 GLG1Q92896 1179 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 IL17RAQ96F46 866 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 ZNF274Q96GC6 653 aaPredicted RBP10.09□□□□□ -0.79
ATG4A-205ENST00000394892 RAD9AQ99638 391 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 ZBED2Q9BTP6 218 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 GJB4Q9NTQ9 266 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 ERAP1Q9NZ08 941 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 TPCN1Q9ULQ1 816 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 CYP46A1Q9Y6A2 500 aa10.09□□□□□ -0.79
ATG4A-205ENST00000394892 TRANK1O15050 2925 aa10.08□□□□□ -0.8
ATG4A-205ENST00000394892 PTPRSQ13332 1948 aa10.08□□□□□ -0.8
ATG4A-205ENST00000394892 IPO5O00410 1097 aaKnown RBP10.08□□□□□ -0.8
ATG4A-205ENST00000394892 LARGE1O95461 756 aa10.08□□□□□ -0.8
ATG4A-205ENST00000394892 GNAT1P11488 350 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms