RNA–Protein interactions for RNA: ENST00000394342.2

APLF-202, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best) BASIC

Gene APLF, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-202ENST00000394342 ATG7O95352 703 aa9.7□□□□□ -0.86
APLF-202ENST00000394342 SMIM10L2AP0DMW4 78 aa9.7□□□□□ -0.86
APLF-202ENST00000394342 SMIM10L2BP0DMW5 78 aa9.7□□□□□ -0.86
APLF-202ENST00000394342 GNAT1P11488 350 aa9.7□□□□□ -0.86
APLF-202ENST00000394342 CYP3A7P24462 503 aa9.7□□□□□ -0.86
APLF-202ENST00000394342 RFC2P35250 354 aa9.7□□□□□ -0.86
APLF-202ENST00000394342 KRT2P35908 639 aa9.7□□□□□ -0.86
APLF-202ENST00000394342 ACTR2P61160 394 aa9.7□□□□□ -0.86
APLF-202ENST00000394342 HMGN5P82970 282 aaKnown RBP9.7□□□□□ -0.86
APLF-202ENST00000394342 RBL2Q08999 1139 aa9.7□□□□□ -0.86
APLF-202ENST00000394342 PTK7Q13308 1070 aa9.7□□□□□ -0.86
APLF-202ENST00000394342 TRIM29Q14134 588 aa9.7□□□□□ -0.86
APLF-202ENST00000394342 NONOQ15233 471 aaKnown RBP eCLIP9.7□□□□□ -0.86
APLF-202ENST00000394342 Q4G0T1 1027 aa9.7□□□□□ -0.86
APLF-202ENST00000394342 PRR16Q569H4 304 aa9.7□□□□□ -0.86
APLF-202ENST00000394342 PSRC1Q6PGN9 363 aaPredicted RBP9.7□□□□□ -0.86
APLF-202ENST00000394342 TRIM50Q86XT4 487 aa9.7□□□□□ -0.86
APLF-202ENST00000394342 RPUSD2Q8IZ73 545 aaKnown RBP9.7□□□□□ -0.86
APLF-202ENST00000394342 RETREG2Q8NC44 543 aa9.7□□□□□ -0.86
APLF-202ENST00000394342 AFAP1L1Q8TED9 768 aa9.7□□□□□ -0.86
APLF-202ENST00000394342 MBOAT7Q96N66 472 aa9.7□□□□□ -0.86
APLF-202ENST00000394342 BACH2Q9BYV9 841 aa9.7□□□□□ -0.86
APLF-202ENST00000394342 TCEAL9Q9UHQ7 104 aa9.7□□□□□ -0.86
APLF-202ENST00000394342 UMODL1Q5DID0 1318 aa9.7□□□□□ -0.86
APLF-202ENST00000394342 PRUNE2Q8WUY3 3088 aa9.7□□□□□ -0.86
APLF-202ENST00000394342 MSH4O15457 936 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 PARNO95453 639 aaKnown RBP9.69□□□□□ -0.86
APLF-202ENST00000394342 MMP1P03956 469 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 PFKMP08237 780 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 CSF2RAP15509 400 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 GCFC2P16383 781 aaKnown RBP9.69□□□□□ -0.86
APLF-202ENST00000394342 MCM2P49736 904 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 SLC26A2P50443 739 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 EPHB4P54760 987 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 CCL23P55773 120 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 KRT76Q01546 638 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 SHHQ15465 462 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 INF2Q27J81 1249 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 TMEM240Q5SV17 173 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 C9orf50Q5SZB4 431 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 EYSQ5T1H1 3165 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 ZNF746Q6NUN9 644 aaPredicted RBP9.69□□□□□ -0.86
APLF-202ENST00000394342 GPR153Q6NV75 609 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 ABHD15Q6UXT9 468 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 PLPPR4Q7Z2D5 763 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 SERINC5Q86VE9 423 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 SMAP1Q8IYB5 467 aaPredicted RBP9.69□□□□□ -0.86
APLF-202ENST00000394342 DHX38Q92620 1227 aaKnown RBP9.69□□□□□ -0.86
APLF-202ENST00000394342 NRCAMQ92823 1304 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 GLG1Q92896 1179 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 SLC5A5Q92911 643 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 TNPO1Q92973 898 aaKnown RBP9.69□□□□□ -0.86
APLF-202ENST00000394342 ATP6V0A1Q93050 837 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 RNPC3Q96LT9 517 aaKnown RBP9.69□□□□□ -0.86
APLF-202ENST00000394342 NAP1L4Q99733 375 aaKnown RBP9.69□□□□□ -0.86
APLF-202ENST00000394342 RNPEPQ9H4A4 650 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 AZI2Q9H6S1 392 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 GJB4Q9NTQ9 266 aa9.69□□□□□ -0.86
APLF-202ENST00000394342 RALGAPA2Q2PPJ7 1873 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 IGKV6D-21A0A0A0MT36 114 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 DDX39AO00148 427 aaKnown RBP9.68□□□□□ -0.86
APLF-202ENST00000394342 DTNBO60941 627 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 CAND2O75155 1236 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 CCNE2O96020 404 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 IQCF3P0C7M6 154 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 CKBP12277 381 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 SELPP16109 830 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 STAT5BP51692 787 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 ADAM17P78536 824 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 PPFIA1Q13136 1202 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 HIC1Q14526 733 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 TRIM71Q2Q1W2 868 aaKnown RBP9.68□□□□□ -0.86
APLF-202ENST00000394342 FAM160B1Q5W0V3 765 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 KRT40Q6A162 431 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 MIS18BP1Q6P0N0 1132 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 C16orf59Q7L2K0 433 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 NEK8Q86SG6 692 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 OXER1Q8TDS5 423 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 LMBR1Q8WVP7 490 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 TNFRSF25Q93038 417 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 SCLYQ96I15 445 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 PCYT2Q99447 389 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 RIT2Q99578 217 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.68□□□□□ -0.86
APLF-202ENST00000394342 TEKT3Q9BXF9 490 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 MTIF3Q9H2K0 278 aaKnown RBP9.68□□□□□ -0.86
APLF-202ENST00000394342 REV3LO60673 3130 aa9.68□□□□□ -0.86
APLF-202ENST00000394342 FNDC1Q4ZHG4 1894 aaPredicted RBP9.68□□□□□ -0.86
APLF-202ENST00000394342 TCHHQ07283 1943 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 RRN3P2A6NIE6 340 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 WDR64B1ANS9 1081 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 SOX1O00570 391 aaPredicted RBP9.67□□□□□ -0.86
APLF-202ENST00000394342 BACH1O14867 736 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 TREHO43280 583 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 GAS7O60861 476 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 TDP2O95551 362 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 FGBP02675 491 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 RPLP2P05387 115 aaKnown RBP9.67□□□□□ -0.86
APLF-202ENST00000394342 PSAPP07602 524 aa9.67□□□□□ -0.86
APLF-202ENST00000394342 ACRP10323 421 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms